Ggra7670.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7670.t1
Unique NameGgra7670.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1028
Homology
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A2V3ILI4 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILI4_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 2.150e-43
Identity = 120/303 (39.60%), Postives = 164/303 (54.13%), Query Frame = 0
Query:  162 TPSEGQLGDDKHRKGGKLGTATGGVTKGNASGHGTSKRRPRRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQINHRKKK-AGNSSNPNSLAASRSQSTQPTAAPPEAWKDALGSTAGGNPAVQCAPVDPNLGMSAAGLSTARLESI--SRKEGSEPRAENPQSTGAKGK--KKTKRRRNEGQTSKPAKKAKTAPEGRVVLARTKEEFVAQMRKHGGNVREMARDSRAAQQESVQQSALAIPQG 459
            TPS+GQ G     +  K     GG++K   +G    KR+PR Y +A+PS HCHICSRR      H VCGN+L++ CRK IC KCF  Y WD+   R A  G W+C HCR ECP R+QC IYNRTS+RRR+K INHRKKK AGN         +    T P A   ++  + +   + G   +   P   ++G +A   + +    +  SRK GS  R     + G  G   K     +NEG+  K  +K        VV+ART+EEF+ QM+ H G+++ M R S A  + S ++ A A+P G
Sbjct:  398 TPSKGQAGPSSSAR--KARRVNGGISKAGGTGRRHEKRKPRTYSQAVPSQHCHICSRRPTTNAPHMVCGNLLQSRCRKTICTKCFERYNWDLEGARNAEAGTWVCTHCRGECPARAQCVIYNRTSDRRRMKMINHRKKKGAGN-------GGAEDGKTLPVAGSDQSADNGVVVGSAGPARLASPPPALSVGSTAVEATGSGHVVVGGSRKAGSSKRRIGANAGGWNGSVGKSLGTGKNEGRIRKGGRKG-GGSSSNVVVARTREEFIRQMKMHSGDLQGMVRHSGAVPRPSDEERA-ALPPG 689          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A2V3IT39 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT39_9FLOR)

HSP 1 Score: 164 bits (414), Expect = 2.350e-38
Identity = 93/193 (48.19%), Postives = 116/193 (60.10%), Query Frame = 0
Query:  119 AGG--VPTSNGGSCKQQ---GSSPP-PDLSTQGDSFPPSIPSNPAGPSN-TPSEGQLGDDKHRKGGKLGTATGGVTKGNASGHGTSKRRPRRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQINHRKKK-AGN 303
            AGG   P   GG+C +    G+SP  P+ S  G S     PS+     + TPS+GQ G     +  K     GG++K   +G    KR+PR Y +A+PS HCHICSRR      H VCGN+L++ CRK IC KCF  Y WD+   R A  G W+C HCR ECP R+QC IYNRTS+RRR+K INHRKK+ AGN
Sbjct:  347 AGGKATPAEAGGTCPRPLGIGTSPTDPNSSAVGGSSLAGTPSSQVEEGHGTPSKGQAGPSSSAR--KARRVDGGISKAGGTGRRQEKRKPRTYSQAVPSQHCHICSRRPTTNAPHMVCGNLLQSRCRKTICTKCFERYNWDLEGARNAEAGTWVCTHCRGECPARAQCVIYNRTSDRRRMKLINHRKKRGAGN 537          
BLAST of Ggra7670.t1 vs. uniprot
Match: R7QTW6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTW6_CHOCR)

HSP 1 Score: 147 bits (371), Expect = 7.220e-33
Identity = 75/136 (55.15%), Postives = 92/136 (67.65%), Query Frame = 0
Query:  198 KRRPRRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQINHRKKK--AGNSSN-------PNSLAASRSQST--QPTA 322
            KR+PR Y +A+PS HCHICSRR      H VCGN+ +  CRK IC KCF +++WD+N  R+A PG W C HCR +CP R+QC IYNRTS+RRRLK INHRK+K  AG+ SN       P S  AS  ++T  QP A
Sbjct:  270 KRKPRTYTQAVPSQHCHICSRRPTEGSPHQVCGNLQKGRCRKTICTKCFLQFRWDLNAAREAPPGTWECPHCRGQCPQRAQCVIYNRTSDRRRLKLINHRKRKGEAGDGSNGKKSKGIPKSSGASSGKTTLAQPVA 405          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A7S1TIE4 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIE4_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 1.060e-19
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 0
Query:  202 RRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQI 294
            ++Y + IPS HCHIC RR+       VC NI    CRKV+C KCF  Y+WD     K   G WLC HCR+ CPPR+QC IY R + RR+++ +
Sbjct:  164 KKYFKRIPSHHCHIC-RRSALMIPTVVCLNIRGGLCRKVVCQKCFETYQWDFESAAKEDSG-WLCTHCREVCPPRAQCFIYQRVNTRRKIRNM 254          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A7S1XH97 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH97_9RHOD)

HSP 1 Score: 100 bits (250), Expect = 5.540e-19
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 0
Query:  202 RRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQI 294
            ++Y + IPS HCHIC RR+       VC NI    CRKV+C KCF  Y+WD     K   G WLC HCR+ CPPR+QC IY R + RR+++ +
Sbjct:  261 KKYFKRIPSHHCHIC-RRSALMIPTVVCLNIRGGLCRKVVCQKCFETYQWDFESAAKEDSG-WLCTHCREVCPPRAQCFIYQRVNTRRKIRNM 351          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A2V3IER0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IER0_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 3.760e-18
Identity = 50/116 (43.10%), Postives = 64/116 (55.17%), Query Frame = 0
Query:  197 SKRRPRRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQINHRKKKAGNSSNPNSLAA 312
            S R+P+ Y + + S  CHICSR          C  +    CRK++C++C  E  WD  D   A P +WLC HC + CPPRSQCHIYNR         IN R+K+ G   N NS+AA
Sbjct:  162 STRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCIREQGWDY-DAISANPDQWLCPHCAEICPPRSQCHIYNR---------INARRKRVGQKQN-NSVAA 266          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A6T6BG32 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6BG32_9RHOD)

HSP 1 Score: 94.0 bits (232), Expect = 2.370e-17
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0
Query:  199 RRPR---RYKEAIPSLHCHIC--SRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSER 288
            RRP+   RY    PS +CH+C  +R+ GP   H +C  +    CRK+ICDKCF  Y W+ ++        WLC HC D CPPR+QC +Y R SER
Sbjct:  160 RRPKIVKRYSNPTPSNYCHVCCRARKRGP---HMICSQVSTGYCRKMICDKCFQAYGWNWDEA--VNDPHWLCPHCSDSCPPRAQCKVYGRNSER 249          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A7S1XF76 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XF76_9RHOD)

HSP 1 Score: 91.7 bits (226), Expect = 1.680e-15
Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 0
Query:  192 SGHGTSKRRPRRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLK 292
            SG    K++ +RYK   PS HCH+CSR         VC  + +  CRKV+C+KCF  Y+WD    R     +WLC HCR ECP ++ C  Y +T+  R  K
Sbjct:  370 SGAAQRKQKMKRYKSLEPSRHCHVCSR-PDDSVEVMVCSRLFQGICRKVVCEKCFERYEWDFEGSR--ANNDWLCTHCRGECPDKACCKKYEKTNLARHWK 467          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A7S1XDQ7 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDQ7_9RHOD)

HSP 1 Score: 80.1 bits (196), Expect = 8.380e-13
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = 0
Query:  202 RRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLK 292
            RRY     S  CHIC+R +G     + C N+  A CRKVIC +C  +Y W+        P  ++C HC+ ECP ++QC  Y +T++RRR K
Sbjct:  166 RRYVNPTASRFCHICAR-SGEGVPIYTCKNVEHAVCRKVICQRCITKYGWET----PTDPKNFVCCHCKGECPEKAQCITYKKTNQRRRAK 251          
BLAST of Ggra7670.t1 vs. uniprot
Match: A0A5J4YS79 (Uncharacterized protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS79_PORPP)

HSP 1 Score: 79.7 bits (195), Expect = 5.280e-12
Identity = 40/94 (42.55%), Postives = 54/94 (57.45%), Query Frame = 0
Query:  209 PSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYKWDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQINHRKKKAG 302
            PS  CHIC++ A       VC N+    CRKVIC+KCFAE  WD  ++  A   EW C HC   CP R+QC++Y + ++R R  + +  K K G
Sbjct:  187 PSRFCHICTKSAKVV-RQAVCYNVQTGSCRKVICEKCFAENGWDF-ELATAPDNEWYCCHCMRICPTRAQCNVYKKNTQRTRPSRAHGCKGKKG 278          
The following BLAST results are available for this feature:
BLAST of Ggra7670.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3ILI42.150e-4339.60Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IT392.350e-3848.19Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QTW67.220e-3355.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TIE41.060e-1948.39Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XH975.540e-1948.39Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IER03.760e-1843.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A6T6BG322.370e-1745.26Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XF761.680e-1541.58Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XDQ78.380e-1340.66Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
A0A5J4YS795.280e-1242.55Uncharacterized protein n=2 Tax=Porphyridium purpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 720..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 888..906
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 831..906
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 839..866
NoneNo IPR availableCDDcd00065FYVE_like_SFcoord: 212..269
e-value: 0.00251816
score: 35.2004

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:23408..26491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7670.t1Ggra7670.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 23408..26491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7670.t1 ID=Ggra7670.t1|Name=Ggra7670.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1028bp
MNNKPNTTGGIRNPGEAFIGHAIRQTSPGSVGQGAVGQRMGNVWFAMDPT
SIMGRVPVGSVGGAPVVIHRANIGVPAQVDEPRETIVLPSANGLGRMSGK
GDEVGETLLVKPNELYGLAGGVPTSNGGSCKQQGSSPPPDLSTQGDSFPP
SIPSNPAGPSNTPSEGQLGDDKHRKGGKLGTATGGVTKGNASGHGTSKRR
PRRYKEAIPSLHCHICSRRAGPKCTHFVCGNILRACCRKVICDKCFAEYK
WDINDVRKAGPGEWLCNHCRDECPPRSQCHIYNRTSERRRLKQINHRKKK
AGNSSNPNSLAASRSQSTQPTAAPPEAWKDALGSTAGGNPAVQCAPVDPN
LGMSAAGLSTARLESISRKEGSEPRAENPQSTGAKGKKKTKRRRNEGQTS
KPAKKAKTAPEGRVVLARTKEEFVAQMRKHGGNVREMARDSRAAQQESVQ
QSALAIPQGSKTPAVGHKNVNPTHSMDQCITVLSSLHRESVPVGNQSIDP
ALCSTAPHIAHPTSVPQPSVIQSVGHPLAHPLPRVMERTVSHNPSLSQGD
MALSIGNRVTDPSSSNIDLRVARAPAIPQESLCLPMRTQFADPTKVEIRQ
SVANFDSAPHGTVGLPIGNPFTHPNQVNVQQGVAGPQTAPRGIVVLPDGN
QHINSVHGKMLHHAHPHPPAIRQGGMALLARNQPIDPAQGNTRQSMTYSH
SVPPASAVPIGNCAMDQRHTITQQGTKQPPAPQGNVSLPIGNNAIAPTPG
NTQQSVPHVAQASREDVIRQTRSNHAMLGDGNAPPYTSASLAPHLAGAVA
GGNSHVPQANDVFLGIDDAIAAAVQDKQNSLDMRKENAQALKGNSSNIPT
SAPTDSLGPSSNPRASESLEQDRERSDSETQLKQSIALMTEHDKDEDNEK
KVTQLGAEKTGLDGSATQERSEIEALVDSFLVDDMQQVPPLFGTAESVQV
QDEEQVDVTGSGEYGEFQLAVNEAFEIPEPLVEDAHDILGDQNSEHRDFL
GSGEEVMNLTNVDFGVGSSCLSAPNGF*
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