Ggra7663.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7663.t1
Unique NameGgra7663.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length454
Homology
BLAST of Ggra7663.t1 vs. uniprot
Match: A0A2V3IVA3 (Ankyrin repeat, bromo and BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVA3_9FLOR)

HSP 1 Score: 548 bits (1411), Expect = 3.430e-191
Identity = 317/450 (70.44%), Postives = 368/450 (81.78%), Query Frame = 0
Query:    6 KARRSSSGRSVSPPAANPPEEDEELIEQGKG--MDTAPSANRPSKKRKRSERESLTSIRAVRSTAQWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYIVHDKKSDTFSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRLLDDVNSQIVENEAHIAREKEKERREIERKXXXXXXXXKAAEEEAALAASQAKKAAAALEKVRREAREAEXXXXXXXXXXXXXXXXXXXXXXXXXXQEALDELLAKQRKERRGSMVNTSSVSSDEHDTGIGEVTFTFVSTEGMEKKRGRKSAIVMELEVQHDDLMKRRKAMLDMSVELNKMKEIELSFDEKQIICEQVARLDFVRMKAVVDIIARGMKRMELLNEVSLELDVNELNNKVLRDIQFFLKNPAAHTAKDALRHIEAKITDIETRLVEIRYQKVG 453
            KARRS+SG SVSP AA P EE EELI+ G G  +++ PSANRP+KKRKR     L+S RAVRST+++AFYEGML EL++  EC DF EPVLTLWSP DVPGYLDKIKHPMDLGTVK++MQ+ KYI+HDKK+D +SFD KAMAKDLRLIFQNCMEYNEPSS LY+TAK+ L+D+NSQI+ENEAHI REKEKER      XXXXXXXXKAAEEEAALAASQAKKAA ALEK +       XXXXX                     QEALDELLAKQR++RRGS+VNTSSVSSD++D GIGEV+FTFVSTEGMEKKRGRKSA+VMELEVQHDDLMKRRKA+L+ + EL KMK IE+SF+EK+ +C  V +LDFVRMKAVVDII  GM R +LL++V ++L+VN++N  VLR+IQFFL+NPAAHTA+DALRHIE KITDIETRLVEIRYQK+ 
Sbjct:    5 KARRSTSGTSVSPTAAVPDEE-EELIDHGNGKALESTPSANRPNKKRKRET--VLSSPRAVRSTSEYAFYEGMLFELMQNAECTDFLEPVLTLWSPQDVPGYLDKIKHPMDLGTVKKHMQNGKYILHDKKTDGYSFDSKAMAKDLRLIFQNCMEYNEPSSPLYNTAKKQLEDINSQILENEAHINREKEKERXXXXXXXXXXXXXXKAAEEEAALAASQAKKAALALEKAKXXXXXXXXXXXXELKRKDAEWAARLKQEKARAVQEALDELLAKQRRDRRGSVVNTSSVSSDDNDGGIGEVSFTFVSTEGMEKKRGRKSAVVMELEVQHDDLMKRRKAILERAAELEKMKSIEMSFEEKRELCNMVGQLDFVRMKAVVDIIVNGMGRADLLHDVEVDLEVNKINKDVLREIQFFLQNPAAHTARDALRHIELKITDIETRLVEIRYQKIS 451          
BLAST of Ggra7663.t1 vs. uniprot
Match: R7QNT2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNT2_CHOCR)

HSP 1 Score: 96.7 bits (239), Expect = 7.710e-18
Identity = 52/128 (40.62%), Postives = 77/128 (60.16%), Query Frame = 0
Query:   57 SLTSIRAVRSTAQWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYIVHDKKSDT--FSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRLLDDVNSQIVE 182
            SL SI A ++  Q A    M+ +LL   +   FS+P+  LW+ D +PGY D +K+PMDL TV++ ++S  Y+    K +    SFD KA +KD+RLIF+N   YN P    Y+ AKRLL+   ++I +
Sbjct:   65 SLQSIAASKNR-QLAHCLRMIKDLLRLKDAFGFSKPIDQLWAIDQLPGYFDIVKNPMDLDTVRQRLESGHYLTTPGKEEVEEVSFDTKAFSKDMRLIFKNAQTYNRPGDTFYEAAKRLLEKFEAKIAQ 191          
BLAST of Ggra7663.t1 vs. uniprot
Match: R7QS71 (Uncharacterized protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS71_CHOCR)

HSP 1 Score: 86.7 bits (213), Expect = 2.840e-16
Identity = 67/167 (40.12%), Postives = 92/167 (55.09%), Query Frame = 0
Query:  156 MEYNEPSSGLYDTAKRLLDDVNSQIVENEAHIAREKEKERREIERKXXXXXXXXKAAEEEAALAASQAKKAAAALEKVRREAREAEXXXXXXXXXXXXXXXXXXXXXXXXXXQEALDELLAKQRKERRGSMVNTSSVSSDEHDTGIGEVTFTFVSTEGMEKKRGRKS 322
            M+YN+P S +++ A++LL    + I   E+ + R KE  +++++R+        K AEEE A AA QA+KA+  + K++RE  EAE                             + E LAK  KER G ++NTSSV  DE D G GE+TF FVST GMEKKRGRKS
Sbjct:    1 MDYNDPKSEIHEMARKLLKKATTMISGLESKLERVKESAQKKLKREQERRWT--KTAEEEGAPAAKQARKASVVMGKMKRETEEAERKRLQEIKKEAEWKTRMQHEKGKAVAA-VVQEALAK--KEREGRVMNTSSVRFDERD-GRGELTFMFVSTVGMEKKRGRKS 161          
BLAST of Ggra7663.t1 vs. uniprot
Match: R7QLJ0 (Bromo domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLJ0_CHOCR)

HSP 1 Score: 85.5 bits (210), Expect = 4.440e-14
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 0
Query:   69 QWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYI--VHDKKSDTFSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRLLDDVNSQIVE 182
            ++ F + ++  LL       FS PVL LW  + +P Y D I HPMDL TVKRN+++  YI   HD     + F+      D+RL+F+NCM YN     L++ A+ LL+D    + E
Sbjct:  260 RFQFCKKLITSLLRNARTGPFSAPVLELWPKEAIPRYFDVISHPMDLRTVKRNLETSVYISPCHDGVL-AYQFEAAMFMDDVRLVFRNCMVYNRAGDMLFNAARDLLEDFEKTMDE 374          
BLAST of Ggra7663.t1 vs. uniprot
Match: A0A7S3A8U2 (Hypothetical protein (Fragment) n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8U2_9RHOD)

HSP 1 Score: 85.1 bits (209), Expect = 6.950e-14
Identity = 85/356 (23.88%), Postives = 151/356 (42.42%), Query Frame = 0
Query:   69 QWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQS----EKYIVHDKKSDTFSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRLLDDVNSQIVENEAHIAREKEKERREIERKXXXXXXXXKAAEEEAALAASQAKKAAAALEKVRREAREAEXXXXXXXXXXXXXXXXXXXXXXXXXXQEALDELLAKQRKERRGSMVNTSSVSSDEHDTGIGEVTFTFVSTEGMEKKRGRKSAIVMELEVQHDDLMKRRKAMLDMSVELNKMKEIELSFDEKQIICEQVARLDFVRMKAVVDIIARGMKRMELLNEVSLELDVNELNNKVLRDIQFFLKN 420
            Q+ F   +  E     +   FS+PV  LW P+ +PGY D +K PMDLGTV R M+S     +Y    K+ D F+ +    A+D+RLIF N + YN     ++D AK LL  +  ++ E          K    + +K        K A+ + +  +   KK         R  R A+                               E   K + +R+ S    S   +DE ++   E   T    E   +   R+ +I   L      L   R      ++    M  + +S++EK+ + E + +L   ++  +++I+A+   + E+  +  +ELD++ ++NK LR+++ F+ +
Sbjct:  218 QYQFCYRLAKEFARHKDGVSFSKPVTELWKPEAIPGYHDIVKKPMDLGTVMRKMESGAYGHEYTQSGKQGDNFNVEM--WAEDMRLIFSNAISYNRAGDQIHDAAKSLLAKLEQKLFEMPG-------KGEENVTKKGSPKNKSGKGADRKHSKHSHHHKK---------RSHRAADG------------------------------EDAGKTKPKRQRSQKAVSKADADE-ESAEDETERTARDVERKLEXVQRQMSI---LRAMSSPLASPRTPTY--AIHAAAMYHVPMSYEEKRKLGENINKLPGEKLGKLIEIVAKRTGKAEMNKDEEIELDIDAMDNKTLREMEAFVNS 519          
BLAST of Ggra7663.t1 vs. uniprot
Match: A0A7S0BSZ3 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BSZ3_9RHOD)

HSP 1 Score: 83.6 bits (205), Expect = 1.720e-13
Identity = 86/357 (24.09%), Postives = 154/357 (43.14%), Query Frame = 0
Query:   69 QWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYIVHD-----KKSDTFSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRLLDDVNSQIVENEAHIAREKEKERREIERKXXXXXXXXKAAEEEAALAASQAKKAAAALEKVRREAREAEXXXXXXXXXXXXXXXXXXXXXXXXXXQEALDELLAKQRKERRGSMVNTSSVSSDEHDTGIGEVTFTFVSTEGMEKKRGRKSAIVMELEVQHDDLMKRRKAMLDMSVELNKMKEIELSFDEKQIICEQVARLDFVRMKAVVDIIARGMKRMELLNEVSLELDVNELNNKVLRDIQFFLKN 420
            Q+ F   +  +   + +   FS+PV  LW P+ +PGY D +K PMDLGTV R M+S  Y  HD     K+ D F+ +  A+  D+RLIF N + YN     ++D AK LL  +  ++ E         +K      RK        K A+ + +  +   KK         R  R A+                               E   K + +R+ S    S   +D+ ++   E   T    E   ++  R+ +I   L      L   R      ++    M  + +S++EK+ + E + +L   ++  +++I+A+   + E+  +  +ELD++ ++NK LR+++ F+ +
Sbjct:  161 QYQFCYRLAKDFARQKDGVSFSKPVTELWKPEAIPGYNDVVKKPMDLGTVLRKMESGAY-GHDYTQGGKQVDEFNVEMWAV--DMRLIFSNAISYNRSGDQIHDAAKSLLARLEQKLFEMP-------DKGEENASRKGSPKKKSGKGADRKHSKHSHHHKK---------RSHRAADG------------------------------EEAGKTKPKRQRSQKAVSKAEADD-ESAEDETERTARDVERKLEEAQRQMSI---LRAMSSPLASPRTP--SYAIHAAAMYHVPMSYEEKRRLGENINKLPGEKLGKLIEIVAKRTGKAEMNKDEEIELDIDAMDNKTLREMEAFVNS 462          
BLAST of Ggra7663.t1 vs. uniprot
Match: A0A2V3IM32 (Bromodomain testis-specific protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM32_9FLOR)

HSP 1 Score: 80.9 bits (198), Expect = 1.140e-12
Identity = 41/114 (35.96%), Postives = 64/114 (56.14%), Query Frame = 0
Query:   69 QWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYIVHDKKSDTFS--FDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRLLDDVNSQI 180
            Q  F   M+ E+L + +   FS+P+  LW  D +PGY D I  PMDL TV+R +++ +Y+    + D     FD KA   D+RL+F+N   YN      +++A RLL+   S++
Sbjct:   90 QVVFCLRMVKEILRRKDAFGFSKPIDQLWPIDQLPGYFDIITKPMDLDTVRRKLEAGQYMTTPGRKDVEEVVFDVKAFEADMRLVFENARTYNRVGDFYHESATRLLEKFESRM 203          
BLAST of Ggra7663.t1 vs. uniprot
Match: A0A2V3JC81 (Bromodomain-containing factor 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JC81_9FLOR)

HSP 1 Score: 72.0 bits (175), Expect = 3.620e-10
Identity = 36/112 (32.14%), Postives = 61/112 (54.46%), Query Frame = 0
Query:   69 QWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYIVHDKKSDTFSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRLLDDVNSQI 180
            Q+ F   ++ E+L+      FS+PV  LW P  +  Y +KIK PMDLGTV++ + +  Y       D   F+     K++RL+F N MEYN+  + L   A + +  +++++
Sbjct:   34 QFHFCNELVGEVLDDEHALSFSKPVDELWEPAVLTDYFEKIKRPMDLGTVQKTLNNNGY-----DDDAGRFNPNLFRKEIRLVFLNAMEYNQRGTDLNRLANKFIHHIDTKL 140          
BLAST of Ggra7663.t1 vs. uniprot
Match: A0A6G0WE44 (Bromo domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE44_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 3.040e-9
Identity = 42/97 (43.30%), Postives = 54/97 (55.67%), Query Frame = 0
Query:   77 LLELLEKPECQD-FSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYIVHDKKSDTFSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRL 172
            L++ L K + +  F+EPV     PDDV GY D I+HPMD+ T++   Q   Y+  D           A A D+RLIF NCM YNE S+  Y  AKRL
Sbjct:  325 LVDQLSKADSRKIFAEPV-----PDDVEGYRDVIRHPMDISTLRHKAQQLHYVSLD-----------AFAADVRLIFSNCMTYNEESTIYYKEAKRL 405          
BLAST of Ggra7663.t1 vs. uniprot
Match: A0A448YXV5 (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXV5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 7.610e-9
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0
Query:   68 AQWAFYEGMLLELLEKPECQDFSEPVLTLWSPDDVPGYLDKIKHPMDLGTVKRNMQSEKYIVHDKKSDTFSFDCKAMAKDLRLIFQNCMEYNEPSSGLYDTAKRL 172
            AQWA    +L  ++++ + + F  PV   W    +  Y   IK PMDLGTVKRN+ S KY     KS          A+D+RL++ NCM YN+  S  Y  AK L
Sbjct:    7 AQWASMSKILQSMIQRSDTEPFRVPVD--WKGMGLFDYPTLIKKPMDLGTVKRNINSRKY-----KS------IPEAAEDIRLVWTNCMTYNQDGSDFYILAKNL 98          
The following BLAST results are available for this feature:
BLAST of Ggra7663.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVA33.430e-19170.44Ankyrin repeat, bromo and BTB domain-containing pr... [more]
R7QNT27.710e-1840.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QS712.840e-1640.12Uncharacterized protein (Fragment) n=1 Tax=Chondru... [more]
R7QLJ04.440e-1437.93Bromo domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3A8U26.950e-1423.88Hypothetical protein (Fragment) n=4 Tax=Rhodosorus... [more]
A0A7S0BSZ31.720e-1324.09Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A2V3IM321.140e-1235.96Bromodomain testis-specific protein n=1 Tax=Gracil... [more]
A0A2V3JC813.620e-1032.14Bromodomain-containing factor 1 n=1 Tax=Gracilario... [more]
A0A6G0WE443.040e-943.30Bromo domain-containing protein n=1 Tax=Aphanomyce... [more]
A0A448YXV57.610e-939.05Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 173..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..220
NoneNo IPR availablePANTHERPTHR22880:SF225BROMODOMAIN-CONTAINING PROTEIN 2coord: 7..422
NoneNo IPR availablePANTHERPTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINScoord: 7..422
NoneNo IPR availableCDDcd04369Bromodomaincoord: 78..180
e-value: 3.58499E-20
score: 83.1906
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 147..166
score: 40.0
coord: 102..118
score: 48.34
IPR001487BromodomainSMARTSM00297bromo_6coord: 62..185
e-value: 1.6E-18
score: 77.5
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 75..170
e-value: 2.6E-16
score: 59.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 85..166
score: 14.8724
IPR027353NET domainPFAMPF17035BETcoord: 357..419
e-value: 2.2E-9
score: 37.4
IPR027353NET domainPROSITEPS51525NETcoord: 347..429
score: 11.086564
IPR038336NET domain superfamilyGENE3D1.20.1270.220coord: 350..428
e-value: 2.5E-9
score: 39.1
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 37..206
e-value: 1.6E-28
score: 101.2
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 64..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000206_piloncontigtig00000206_pilon:134494..135855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7663.t1Ggra7663.t1Gracilaria gracilis GNS1m malemRNAtig00000206_pilon 134494..135855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7663.t1 ID=Ggra7663.t1|Name=Ggra7663.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=454bp
MARNQKARRSSSGRSVSPPAANPPEEDEELIEQGKGMDTAPSANRPSKKR
KRSERESLTSIRAVRSTAQWAFYEGMLLELLEKPECQDFSEPVLTLWSPD
DVPGYLDKIKHPMDLGTVKRNMQSEKYIVHDKKSDTFSFDCKAMAKDLRL
IFQNCMEYNEPSSGLYDTAKRLLDDVNSQIVENEAHIAREKEKERREIER
KRETERKRRKAAEEEAALAASQAKKAAAALEKVRREAREAERRRLEELRR
KEAEWAARLKQEKARAVQEALDELLAKQRKERRGSMVNTSSVSSDEHDTG
IGEVTFTFVSTEGMEKKRGRKSAIVMELEVQHDDLMKRRKAMLDMSVELN
KMKEIELSFDEKQIICEQVARLDFVRMKAVVDIIARGMKRMELLNEVSLE
LDVNELNNKVLRDIQFFLKNPAAHTAKDALRHIEAKITDIETRLVEIRYQ
KVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR027353NET_dom
IPR038336NET_sf
IPR036427Bromodomain-like_sf