Ggra7657.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7657.t1
Unique NameGgra7657.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length181
Homology
BLAST of Ggra7657.t1 vs. uniprot
Match: A0A2V3IWW2 (Protein BOBBER 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWW2_9FLOR)

HSP 1 Score: 258 bits (659), Expect = 1.650e-85
Identity = 121/176 (68.75%), Postives = 149/176 (84.66%), Query Frame = 0
Query:    5 DSQQRAAPSAGNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRELLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAKLQ 180
            D++   AP  GNGG GPNYSW+QTL E+++  AV   TTA+Q++CDISD ++ + ++G   + G L NAVRADEC+WQIDRQD+T+S+HLEK D +NWW CVVQGH+ +D+SKI+PDNSRLDELD ETRGMVEKMMYDQRQKAAGLPTSDEQ KM+LFEKFK++HPEMDFS+AKLQ
Sbjct:    6 DNKAVVAPDTGNGGEGPNYSWSQTLAEVTLTTAVARETTAKQVQCDISDKSIKLVINGVSHIEGHLSNAVRADECYWQIDRQDATVSIHLEKQDRMNWWPCVVQGHSCVDLSKIEPDNSRLDELDSETRGMVEKMMYDQRQKAAGLPTSDEQQKMQLFEKFKREHPEMDFSNAKLQ 181          
BLAST of Ggra7657.t1 vs. uniprot
Match: protein BOBBER 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D66F2 (protein BOBBER 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D66F2)

HSP 1 Score: 202 bits (514), Expect = 1.600e-63
Identity = 98/166 (59.04%), Postives = 123/166 (74.10%), Query Frame = 0
Query:   15 GNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGR--ELLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAK 178
            GNGG+G  YSWTQTL E+ +   VP GT  R + C+I D  L + L      +L G L   V+AD+  WQIDR+D T+ +HLEK D ++WW+CVV+G   IDVSKI+PDNS+L +LDGETRGMVEKMMYDQR+KAAGLPTSDEQ +  + +KF+QQHPEMDF +AK
Sbjct:    7 GNGGSGEGYSWTQTLSEVVITATVPPGTPGRLVHCEIGDQTLSLGLKEAPSRILDGKLGGTVKADDSMWQIDREDGTIIVHLEKKDRMSWWNCVVEGEPVIDVSKIEPDNSKLSDLDGETRGMVEKMMYDQRRKAAGLPTSDEQRQHDMLKKFQQQHPEMDFRNAK 172          
BLAST of Ggra7657.t1 vs. uniprot
Match: A0A6T6N0E7 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6N0E7_9RHOD)

HSP 1 Score: 191 bits (484), Expect = 6.540e-59
Identity = 92/171 (53.80%), Postives = 125/171 (73.10%), Query Frame = 0
Query:    9 RAAPSAGNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRE-LLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAK 178
            +  P+AGNGG    Y WTQTLG+L+V +  P     + + C I ++ + V + G++ +LSG L   V ADE FWQ+DR +STL L+LEK + + WW  VV+G  ++D +K++P+NS+L +LDGETRGMVEKMM+DQRQKA+GLPTSDE  K ++FEKFK QHPEMDFS+ K
Sbjct:    8 KLVPNAGNGGETDKYKWTQTLGDLNVGIKFPVLPNKKSVSCIIEESRVSVGVVGQDPILSGELFAKVNADESFWQLDRDESTLELYLEKQNKMEWWKSVVKGEPELDTTKVEPENSKLSDLDGETRGMVEKMMFDQRQKASGLPTSDELQKEQMFEKFKSQHPEMDFSNVK 178          
BLAST of Ggra7657.t1 vs. uniprot
Match: M2WAF7 (Salt tolerance protein 5-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WAF7_GALSU)

HSP 1 Score: 178 bits (451), Expect = 6.070e-54
Identity = 86/173 (49.71%), Postives = 125/173 (72.25%), Query Frame = 0
Query:    9 RAAPSAGNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTL---DGRELLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAK 178
            + AP++GNGG   +Y+WTQTL +++VV+ VP G T++ I C++    L + +   + + L++  L  AV A+E FWQ+D ++S ++++L+KV+ + WW  V Q   +ID SK++P+NS+L +LD ETR MVEKMM+DQRQKAAGLPTSDE  K +L  KF +QHPEMDFS AK
Sbjct:    3 KQAPNSGNGGTTESYTWTQTLQDVTVVVPVPQGNTSKTIVCNVEQKHLKIKVQIPEEKVLVNDDLFAAVYAEESFWQLDSKESVVTIYLDKVNKMEWWPKVTQSEPEIDTSKVEPENSKLSDLDPETRSMVEKMMFDQRQKAAGLPTSDELKKQELLAKFMEQHPEMDFSQAK 175          
BLAST of Ggra7657.t1 vs. uniprot
Match: A0A388KUZ5 (CS domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KUZ5_CHABU)

HSP 1 Score: 182 bits (462), Expect = 5.020e-53
Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 0
Query:   12 PSAGNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRE-LLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAKL 179
            P+AGNG +   YSWTQTL ELSV + VP GT AR +  DI  N L   L G + +L+G L  +V+ADEC+W ++     LS+HL KV+ + WW+CVV G   I+  K++P+NS+L +LDGETR  VEKMM+DQRQKA GLPTS+EQ K  + +KF  QHP+MDFS AK+
Sbjct:  220 PNAGNGADHEKYSWTQTLSELSVSIPVPPGTKARALTVDIKRNHLKAGLKGMQPILAGELHKSVKADECYWGLE-DGKVLSIHLTKVNTMEWWNCVVNGEPVINTQKVEPENSKLSDLDGETRQTVEKMMFDQRQKALGLPTSEEQKKQDILKKFMAQHPDMDFSRAKI 387          
BLAST of Ggra7657.t1 vs. uniprot
Match: A0A3S3N029 (Protein BOBBER 1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3N029_9MAGN)

HSP 1 Score: 173 bits (438), Expect = 4.860e-52
Identity = 86/171 (50.29%), Postives = 121/171 (70.76%), Query Frame = 0
Query:   10 AAPSAGNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRE-LLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAKL 179
            A P++GNG +  NYSWTQTL E+SV + VP GT +R + C+I  N L V L G+  +++G L  +V+ D+CFW I+  +  +S+ L K + + WW C+V+G  QID  K++P+NS+L +LD ETR  VEKMM+DQRQK+ GLPTSDE  K ++ +KF  +HPEMDFS AK+
Sbjct:    2 AGPNSGNGLDLDNYSWTQTLQEVSVNVPVPKGTKSRFVVCEIKKNQLKVGLKGQPPVINGELFQSVKVDDCFWSIE-DEKFISILLTKQNQMEWWKCLVKGDPQIDTQKVEPENSKLSDLDPETRQTVEKMMFDQRQKSMGLPTSDEVQKQEILKKFMAEHPEMDFSRAKI 171          
BLAST of Ggra7657.t1 vs. uniprot
Match: A0A1Y2FNN0 (Nuclear movement protein nudC n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FNN0_PROLT)

HSP 1 Score: 172 bits (435), Expect = 1.520e-51
Identity = 81/161 (50.31%), Postives = 114/161 (70.81%), Query Frame = 0
Query:   19 NGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRELLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAKL 179
            +G  YSW+QTL E+S+ + VP GT  + +   I  + L V L G+ L SG+L   V+ D+  W ID Q   + +HLEK++  +WW CV+QGHA+ID +KIQP+NS+L++LDG+TR MVEKMM+DQRQK  G P+SD+  K  +  KF+++HPEMDFS AK+
Sbjct:   15 DGCTYSWSQTLKEVSITVPVPQGTRGKDLDIQILPSKLSVKLKGQVLFSGSLAKDVKVDDSTWTIDSQRE-VQIHLEKLNGTSWWECVIQGHAKIDTTKIQPENSKLEDLDGDTRAMVEKMMFDQRQKEMGKPSSDDLKKQDMLAKFQREHPEMDFSKAKM 174          
BLAST of Ggra7657.t1 vs. uniprot
Match: S8BSG8 (CS domain-containing protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8BSG8_DACHA)

HSP 1 Score: 172 bits (436), Expect = 1.660e-51
Identity = 86/159 (54.09%), Postives = 114/159 (71.70%), Query Frame = 0
Query:   23 YSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRE-LLSGALCNAVRADECFWQI-DRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAKL 179
            Y W+QTL E+ V + VP GT  + +  +I   +  + L G+E +L G L  +++ DE  W I DR+  T+ +H EKV+A  WW  V+  H +ID++KIQP+NS+L +LDGETRGMVEKMMYDQRQK  GLPTS+EQ KM++FEKFK QHPEMDFS A+L
Sbjct:   31 YKWSQTLEEVDVAVPVPEGTRGKDLIVEIKSTSFKIALKGQEPILEGTLFKSIKVDEATWSIADRK--TVEVHFEKVNAKEWWPHVLTHHPKIDITKIQPENSKLSDLDGETRGMVEKMMYDQRQKEMGLPTSEEQKKMEMFEKFKSQHPEMDFSKAQL 187          
BLAST of Ggra7657.t1 vs. uniprot
Match: D7FU75 (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU75_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.730e-51
Identity = 89/166 (53.61%), Postives = 118/166 (71.08%), Query Frame = 0
Query:   15 GNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRELL-SGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAKL 179
            GNGG+   Y WTQTL ELSVV+ VP G+ +R + CDI+ + L V L G+ LL  G + N V+ D+ FW ++     +S+ L+K + + WW CVV+G  +I+ SK+QP+NS+L ELDGETR  VEKMM+DQRQKA GLPT+DE SK ++  KF  QHPEMDFS AK+
Sbjct:  213 GNGGSTDKYDWTQTLQELSVVVPVPEGSKSRDVVCDITKSRLRVGLKGQPLLVDGEMYNKVKVDDSFWTLE-DGKEVSIALQKENQMEWWKCVVKGDPEINTSKVQPENSKLSELDGETRKTVEKMMFDQRQKAQGLPTADEMSKQEMLGKFMAQHPEMDFSRAKI 377          
BLAST of Ggra7657.t1 vs. uniprot
Match: G1XC04 (CS domain-containing protein n=5 Tax=Orbilia oligospora TaxID=2813651 RepID=G1XC04_ARTOA)

HSP 1 Score: 172 bits (435), Expect = 2.830e-51
Identity = 87/158 (55.06%), Postives = 110/158 (69.62%), Query Frame = 0
Query:   23 YSWTQTLGELSVVLAVPSGTTARQIKCDISDNALHVTLDGRE-LLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAVNWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGLPTSDEQSKMKLFEKFKQQHPEMDFSHAKL 179
            Y WTQ L E+ +++A+P+GT  R +  DI    L V L G+E L  G L   +R D+  W +   DSTL +HL+K +   WW  V+  H +IDVSKIQP+NS+L +LDGETRGMVEKMMYDQRQK  GLPTSDEQ KM + +KF+ QHPEMDFS AK+
Sbjct:   38 YKWTQALEEVDIIVALPAGTRGRDLIVDIKLTGLKVGLKGKEPLFEGTLYKPIRLDDSTWSVS--DSTLEIHLDKSNKKEWWPHVLTHHPKIDVSKIQPENSKLSDLDGETRGMVEKMMYDQRQKEMGLPTSDEQKKMDMLKKFQVQHPEMDFSKAKI 193          
The following BLAST results are available for this feature:
BLAST of Ggra7657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWW21.650e-8568.75Protein BOBBER 1 n=1 Tax=Gracilariopsis chorda Tax... [more]
protein BOBBER 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D66F21.600e-6359.04protein BOBBER 1-like n=1 Tax=Mercenaria mercenari... [more]
A0A6T6N0E76.540e-5953.80Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2WAF76.070e-5449.71Salt tolerance protein 5-like protein n=1 Tax=Gald... [more]
A0A388KUZ55.020e-5353.85CS domain-containing protein n=1 Tax=Chara braunii... [more]
A0A3S3N0294.860e-5250.29Protein BOBBER 1 n=1 Tax=Cinnamomum micranthum f. ... [more]
A0A1Y2FNN01.520e-5150.31Nuclear movement protein nudC n=1 Tax=Protomyces l... [more]
S8BSG81.660e-5154.09CS domain-containing protein n=1 Tax=Dactylellina ... [more]
D7FU751.730e-5153.61CS domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
G1XC042.830e-5155.06CS domain-containing protein n=5 Tax=Orbilia oligo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007052CS domainPFAMPF04969CScoord: 21..96
e-value: 1.6E-11
score: 45.0
IPR007052CS domainPROSITEPS51203CScoord: 18..107
score: 14.036223
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 14..141
e-value: 1.8E-36
score: 127.0
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 5..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR12356:SF3NUCLEAR MIGRATION PROTEIN NUDCcoord: 7..179
NoneNo IPR availableCDDcd06467p23_NUDC_likecoord: 23..107
e-value: 7.70055E-29
score: 100.315
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 7..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000206_piloncontigtig00000206_pilon:120353..121017 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7657.t1Ggra7657.t1Gracilaria gracilis GNS1m malemRNAtig00000206_pilon 120353..121017 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7657.t1 ID=Ggra7657.t1|Name=Ggra7657.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=181bp
MSDGDSQQRAAPSAGNGGNGPNYSWTQTLGELSVVLAVPSGTTARQIKCD
ISDNALHVTLDGRELLSGALCNAVRADECFWQIDRQDSTLSLHLEKVDAV
NWWSCVVQGHAQIDVSKIQPDNSRLDELDGETRGMVEKMMYDQRQKAAGL
PTSDEQSKMKLFEKFKQQHPEMDFSHAKLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007052CS_dom
IPR008978HSP20-like_chaperone
IPR037898NudC_fam