Ggra7631.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7631.t1
Unique NameGgra7631.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length292
Homology
BLAST of Ggra7631.t1 vs. uniprot
Match: A0A2V3ISR2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR2_9FLOR)

HSP 1 Score: 317 bits (811), Expect = 1.570e-100
Identity = 158/224 (70.54%), Postives = 182/224 (81.25%), Query Frame = 0
Query:    2 SPEDFASKYVLPPHRQRRTQPQSEINPSADGHQFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVPLHNTDDRLKVMLYTEWPKLRMYVFVQHLQKDEQDPFGDAEFQRRERD 225
            S E+F  KYV       R        PS+   QFYHYSQASQF+LRAQIDC    TGEVFDVKTRAVAKIRYDL NYLQ+ S+KLRFLKGKTDSYEREFYDMVRTVF KYALQLRIGRM+GALVAYHNTTELL LEYISLKEIESY+FGS+ WADVAFGTA+ LL+ +L TIT ++PL + D++LKVMLYTEW KL+M+VFVQ L+K E D FG+ EF+RR+++
Sbjct:  282 SAEEFTRKYVASQSEVGRASEYPHAMPSSHEQQFYHYSQASQFLLRAQIDCRNAATGEVFDVKTRAVAKIRYDLANYLQYTSHKLRFLKGKTDSYEREFYDMVRTVFLKYALQLRIGRMAGALVAYHNTTELLGLEYISLKEIESYIFGSERWADVAFGTAVHLLQEVLGTITKSMPLDDCDEKLKVMLYTEWSKLKMFVFVQRLKKGEVDAFGNKEFERRDQE 505          
BLAST of Ggra7631.t1 vs. uniprot
Match: R7QNH1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNH1_CHOCR)

HSP 1 Score: 260 bits (665), Expect = 1.020e-78
Identity = 132/224 (58.93%), Postives = 165/224 (73.66%), Query Frame = 0
Query:    2 SPEDFASKYVLPP------HRQRRTQPQSEINPSADGHQFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVPLHNTDDRLKVMLYTEWPKLRMYVFVQHLQKDEQDPFGDAEF 219
            SP +F++KYV  P      H     + +   +P     QFY+YS+ S+F+LRAQIDC   NTGEVFDVKTRAVA IRYDL NY   ++++LRFL+GK DSYEREFYDMVRTVF KYALQLRIGRMSGALVAYHNT+E+L LEY+ LKEI SYVFGS+ W D+AFGT + LL+ +L+ IT  V   + ++ LKV++ TEW +L MY+FVQ +   EQDPFG + F
Sbjct:  291 SPNEFSTKYVRSPNENSSVHHDNMNESKGLASPDE---QFYNYSKISKFLLRAQIDCRNENTGEVFDVKTRAVAPIRYDLQNYEAFSTHRLRFLRGKRDSYEREFYDMVRTVFLKYALQLRIGRMSGALVAYHNTSEILGLEYLPLKEINSYVFGSEKWGDIAFGTTMHLLQDVLEKITAEVCQGDPNENLKVVMSTEWSRLHMYIFVQRVVDGEQDPFGPSVF 511          
BLAST of Ggra7631.t1 vs. uniprot
Match: A0A7S0ZFZ6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZFZ6_9RHOD)

HSP 1 Score: 164 bits (416), Expect = 1.340e-42
Identity = 79/186 (42.47%), Postives = 119/186 (63.98%), Query Frame = 0
Query:   29 SADGH-QFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVPLHNTDDRLKVMLYTEWPKLRMYVFVQHLQKDEQDP 213
            SAD   Q Y+Y++   F LRAQ+D     TG +FD+KTRA  KIRY++ NY Q  SY +  LKG+  S+EREFYD++RT F KYA Q++IGRM+GA VA+HNT E+   EY+ ++EI++YVFG + W  +AF  A+ L    ++   +  P    +D +++++        ++ FVQ +  +E+DP
Sbjct:  389 SADAEPQSYNYTRMGDFFLRAQLDAMDKKTGLIFDLKTRATLKIRYNIENYKQGVSYLINQLKGENHSFEREFYDLIRTAFIKYAYQIKIGRMNGAFVAFHNTDEIFGFEYVPIEEIDTYVFGGEYWGSIAFDRAVQLYNIFMNHAMSLFPNRKPEDSVRIVICPLKASGSLHFFVQLIPANEEDP 574          
BLAST of Ggra7631.t1 vs. uniprot
Match: M1VLA8 (Probable mitochondrial mRNA processing protein PET127 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VLA8_CYAM1)

HSP 1 Score: 163 bits (412), Expect = 7.040e-42
Identity = 93/211 (44.08%), Postives = 122/211 (57.82%), Query Frame = 0
Query:    1 MSPEDFASKYVLPPHRQRRTQPQSEINPSADGHQFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVPLHNT----DDRLKVMLYTEWPKLRMYVFVQHLQ 207
            M P  F  K++ P   Q +      I+P  D  Q ++YS+   FVLRAQIDC  P T E FD+KTRA A IR+DL NY  +  Y++  L+G   SYEREFYDM+R+VF KY  QLR+GRM GA V YHNT E    E++ L E+E YVFG+  WA  AF   + L ++IL    T    H+      D LK+ +     + R  V+VQ L+
Sbjct:  424 MEPGAFCRKFLRP---QAQLLTDEAISPMPD--QAFNYSRCGDFVLRAQIDCRHPRTDEPFDLKTRAAAPIRWDLDNYRDYLEYRITHLRGPMYSYEREFYDMIRSVFIKYCFQLRVGRMVGAFVTYHNTRECFGFEFVPLSEMEQYVFGNTHWAREAFSAVMGLFQQILAH--TAAHWHDALQRDHDSLKLTIDPGRQRGRARVYVQRLR 627          
BLAST of Ggra7631.t1 vs. uniprot
Match: A0A7S3EAR2 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EAR2_9RHOD)

HSP 1 Score: 153 bits (387), Expect = 8.530e-39
Identity = 91/215 (42.33%), Postives = 127/215 (59.07%), Query Frame = 0
Query:   35 FYHYSQASQFVLRAQIDCHKPNTG--EVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVPLHNTDDRLKVMLYTEWPKLRMYVFVQHLQKDEQDPF-----------GDAEFQR-------RERDACLY 229
            F++YS+  + ++R+Q+D  +  +   E+FD+K+RAVA  RY L  Y Q A+YK+++ +G T SYE EFYDMVR+VF KYA QLR+G MSGA V +HNT E+L  EYI L+EIE YVFGS  WA+ AFG  +SL + I++T       +       VM  ++     +Y+FV H   D +DP            GDA+F         RE D  +Y
Sbjct:  343 FHNYSRFEKLLIRSQVDGQRQGSRGIELFDIKSRAVAPTRYHLTRYKQFANYKIQYPRGVTRSYELEFYDMVRSVFMKYAFQLRLGGMSGAFVCFHNTREMLGFEYIRLQEIEQYVFGSSHWAEKAFGFTLSLYQVIMETAVNAFSEYPRGKLRIVMRISD--DTGLYLFV-HRIPDIKDPLSRKALSNVPIKGDADFAEYLKANGLRESDVKMY 554          
BLAST of Ggra7631.t1 vs. uniprot
Match: A0A7J7IF74 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IF74_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 4.380e-38
Identity = 84/176 (47.73%), Postives = 107/176 (60.80%), Query Frame = 0
Query:   34 QFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILD-TITTTVPLHNTD-DRLKVMLYTEWPKLRMYVFVQHLQ 207
            Q ++YS+   FVLRAQIDC  P T E FD+KTRA A IR+DL NY  + +Y++  L+G   SYEREFYDM+R+VF KY  QLR+GRM GA V YHNT E    E++ L E+E YVFG  L         + L + ILD TI T       D D LK+ +     + R  V+VQ L+
Sbjct:  432 QAFNYSRCGDFVLRAQIDCRHPRTDEPFDLKTRAAAPIRWDLDNYRDYLAYRITHLRGPMYSYEREFYDMIRSVFIKYCFQLRVGRMVGAFVTYHNTRECFGFEFVPLTEMEQYVFGKYLLGSRGILLCMGLFQNILDHTIATWGDALRRDRDPLKLTIDPGRQRGRARVYVQRLR 607          
BLAST of Ggra7631.t1 vs. uniprot
Match: A0A5J4YQN5 (mRNA degradation protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQN5_PORPP)

HSP 1 Score: 150 bits (380), Expect = 2.030e-37
Identity = 72/157 (45.86%), Postives = 100/157 (63.69%), Query Frame = 0
Query:   34 QFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVPLHNTDDRLKVML 190
            Q Y+Y+Q   F+ RAQIDC     G+ FDVK+RAVA I++D+ +Y  H+ Y +    G  +S++REF+D++R  F KYA Q+R+GRM GA + YHNT   L  EY+ L E+E YVFG   W +VAF  ++ L  RILD   + VP     D ++VML
Sbjct:  473 QMYNYTQMGNFLFRAQIDCVDARNGKFFDVKSRAVAPIQWDVQDYEMHSHYMIDRATGDMNSFQREFFDLIRNGFMKYAFQIRLGRMDGAFIIYHNTKTCLGFEYVGLPEMEQYVFGGHWWGEVAFRYSMQLYNRILDHSLSLVPEAQLGDSVRVML 629          
BLAST of Ggra7631.t1 vs. uniprot
Match: A0A6A5AV95 (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5AV95_NAEFO)

HSP 1 Score: 149 bits (376), Expect = 6.470e-37
Identity = 76/178 (42.70%), Postives = 110/178 (61.80%), Query Frame = 0
Query:    1 MSPEDFASKYVLPPHRQRRTQPQSEINPSADGHQFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVP 178
            M PE+F  +YV         +  ++ N S D    Y Y +   F++R+Q+DC+ P  G VFD+KTRA+++IR ++ NY +  + K++ +KG  +SYEREFYDMVR+VF KY+ Q RIG M G  VAYHNT+EL   EY+ L EI+ +VFGS    +  F   + ++  +LD IT   P
Sbjct:  570 MEPEEFEKRYV---------KKYAQENISMDDADVYRYLRHGSFIIRSQLDCYDPQHG-VFDIKTRAISRIRTNMENYERFVNSKIKHVKGILNSYEREFYDMVRSVFVKYSFQARIGDMDGMFVAYHNTSELFGFEYMKLAEIDKFVFGSTYMGERFFNLLLDVMRDVLDRITDRFP 737          
BLAST of Ggra7631.t1 vs. uniprot
Match: uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D)

HSP 1 Score: 148 bits (374), Expect = 1.350e-36
Identity = 86/214 (40.19%), Postives = 128/214 (59.81%), Query Frame = 0
Query:    1 MSPEDFASKYVLPP-HRQRRTQPQSEINPSADGHQFYHYSQASQFVLRAQIDCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITT---TVPLHNTDDRLKVMLYTEWPKLRMYVFVQHLQKDE 210
            M PE+F  ++V    H    +  ++E+         Y Y +   F++R+Q+DC+ P  G VFD+KTRA+ +IR ++ +Y +  + K++ +KG  +SYEREFYDMVR+VF KY++Q RIG M G  +AYHNT EL   EY+ L EI+SYVFG+   A+  F   + LL  +LD IT     +PL  T   LKV  Y       + +FV+ +Q+D+
Sbjct:  546 MEPEEFEKRFVKKYCHTDAISMNEAEV---------YRYLRHGSFIVRSQLDCYHPKHG-VFDIKTRAINRIRINMEHYEKFVNSKIKLVKGINNSYEREFYDMVRSVFVKYSMQARIGDMDGMFLAYHNTRELFGFEYLKLSEIDSYVFGNSYMAERFFTLLLDLLRDVLDRITDRFPNIPLKITFRPLKVEPYF------IDIFVEPVQEDK 743          
BLAST of Ggra7631.t1 vs. uniprot
Match: Q24CB9 (mRNA processing protein, putative n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q24CB9_TETTS)

HSP 1 Score: 144 bits (364), Expect = 1.160e-35
Identity = 77/178 (43.26%), Postives = 109/178 (61.24%), Query Frame = 0
Query:   31 DGHQFYHYSQASQFVLRAQIDCHK--PNTGE--VFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREFYDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFGSQLWADVAFGTAISLLERILDTITTTVPLHNTDDRLKVMLYTEWPKLRMYVFVQ 204
            D H+F   ++     LR+QIDC    P TG+  VF++KTRAV  IRYDL NYL H  Y++    G   S+ERE+YD++R    KYA QL+IGRM GA +AYHNT E+   EY+  KEIE+  FG+Q +AD +F     +L  +LD I   +  +   + LK+  Y++ P  +M +FV+
Sbjct:  326 DHHRFMKLNK--NICLRSQIDCQAIDPKTGQPFVFEIKTRAVCPIRYDLNNYLDHIDYRINTKFGLHSSFEREYYDLIRGAMLKYAFQLKIGRMDGAFIAYHNTKEIFGFEYVKTKEIETRCFGNQFFADASFVVCSKILTNLLDHILNDLE-NEKYEMLKIGFYSDSPTKKMIIFVE 500          
The following BLAST results are available for this feature:
BLAST of Ggra7631.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISR21.570e-10070.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QNH11.020e-7858.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZFZ61.340e-4242.47Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M1VLA87.040e-4244.08Probable mitochondrial mRNA processing protein PET... [more]
A0A7S3EAR28.530e-3942.33Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7J7IF744.380e-3847.73Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A5J4YQN52.030e-3745.86mRNA degradation protein n=1 Tax=Porphyridium purp... [more]
A0A6A5AV956.470e-3742.70Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFD236D1.350e-3640.19uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
Q24CB91.160e-3543.26mRNA processing protein, putative n=1 Tax=Tetrahym... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013943Mitochondrial protein Pet127PFAMPF08634Pet127coord: 23..171
e-value: 1.7E-50
score: 172.0
IPR013943Mitochondrial protein Pet127PANTHERPTHR31014UNCHARACTERIZEDcoord: 23..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:578531..579406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7631.t1Ggra7631.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 578531..579406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7631.t1 ID=Ggra7631.t1|Name=Ggra7631.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=292bp
MSPEDFASKYVLPPHRQRRTQPQSEINPSADGHQFYHYSQASQFVLRAQI
DCHKPNTGEVFDVKTRAVAKIRYDLPNYLQHASYKLRFLKGKTDSYEREF
YDMVRTVFFKYALQLRIGRMSGALVAYHNTTELLALEYISLKEIESYVFG
SQLWADVAFGTAISLLERILDTITTTVPLHNTDDRLKVMLYTEWPKLRMY
VFVQHLQKDEQDPFGDAEFQRRERDACLYSSRILDSCALYPSRAIALATY
IRCPLRCATRNIRAHSPRSSSVTFLPPPLSPTPSSPSPQSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013943Pet127