Ggra7605.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7605.t1
Unique NameGgra7605.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length531
Homology
BLAST of Ggra7605.t1 vs. uniprot
Match: A0A2V3IWQ7 (C2 NT-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWQ7_9FLOR)

HSP 1 Score: 611 bits (1576), Expect = 6.290e-214
Identity = 352/532 (66.17%), Postives = 419/532 (78.76%), Query Frame = 0
Query:    1 MAQRVKDLIKRSGSKIAAQQGSVKHIGTTPYRFRIDIFVSGVERIQNAGQVSVTCERRGNRHATPLMNVLNGRAEIGHTITLECTLFRKTPKNSKNTAAGGAPASSNDTSELHFDEKLAKIVLRKGAVDGKAMGKISIDFAKYIKGTTSTVFADLTLSNGSIVITKIEATMLHIGKKSKNGSRGGSDTLSEITDVYRDDDSIFGDGVSQDLGDLEHVTRSPNNLHGTFSSDIGMSPPSSVTPNDSPRRLVSSGKAATFTGHVPNRPQSLTSDSVNSLESSPEL-SADCSKRGKGQDGMKESPSLRDKLKTKLKERKGT-KKAREDKSDEAKSRAIPSSRSSAATTSKREKEKLVIPPELLSELKELKAQIHALKKENAKLKTTNKNANEEINALKADLNARELDLEDEKNKSVRGQKVSGTNAAPELSNTVKEKDRRIAELEAQNESLLEELEDNHEQQVESAQSYNASNNQIKDLKKKIEELEIALKREPRFLDVVNELKVTKVSLALANMEKEQALFQMQAMQHKLGIIT 530
            MAQRV++L+K SGSK++   GSVKHIGTTPYRFRID+FVSGVER+ NA QVSVT ER+G ++AT    VLNG+AEIG ++ +ECTLFR TPK SK     G P+S+ND SEL+FDEKLAK VLRKG  DGK +GKI++D AKYIKGTTSTVFADL LSNGS VITKIEATMLHIG+K KNGSR GSDTLSE+TDVYRDDDSIFGD VS+DLGDLE VTR+P +L G        SP S+ T  DSP++  S  K++TF G +P R +SL +DS+ S +S+ ++   + SKR KG D MKESPSLRDKLK+KL++RK   KK ++D S E K  A P S     T SKREKEK  +PPEL+SE+KELKA ++ALKKEN KLK+  KNA EEI+ALKADL ARELDLEDEK++S R  K +   A PELSN    KD+RIAELEA NE+LLEELE+ H+QQV ++    AS NQ K+++K+IEELEIALKREPRFLDVVNELKVTKVSLALANMEKEQALF++QAMQHKLG+IT
Sbjct:    1 MAQRVRNLLKHSGSKLSVAHGSVKHIGTTPYRFRIDVFVSGVERVTNAPQVSVTWERKGKKYATQARQVLNGKAEIGQSLAMECTLFRNTPKPSK-----GEPSSANDASELNFDEKLAKFVLRKGGPDGKPIGKITLDLAKYIKGTTSTVFADLNLSNGSTVITKIEATMLHIGRKGKNGSRAGSDTLSEMTDVYRDDDSIFGDTVSEDLGDLEQVTRTPPSL-GAVQIPSASSPVSTPTSADSPQKTASRQKSSTFLGVLPKRQESLAADSLKSFDSATDIPKKEKSKRVKGNDNMKESPSLRDKLKSKLRDRKAAAKKPKDDDSSEGK--AKPPSTKGIPTPSKREKEKPAVPPELISEVKELKAHVNALKKENLKLKSAFKNAQEEIDALKADLEARELDLEDEKSRSSRSPKPT---ALPELSNR---KDKRIAELEANNENLLEELEELHQQQVLTSNQDAASANQTKEMRKRIEELEIALKREPRFLDVVNELKVTKVSLALANMEKEQALFKLQAMQHKLGMIT 518          
BLAST of Ggra7605.t1 vs. uniprot
Match: R7QRX4 (C2 NT-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRX4_CHOCR)

HSP 1 Score: 340 bits (871), Expect = 1.150e-107
Identity = 241/535 (45.05%), Postives = 320/535 (59.81%), Query Frame = 0
Query:    9 IKRSGSKIAAQQGSVKHIGTTPYRFRIDIFVSGVERIQNAGQVSVTCERRGNRHATPLMNVLNGRAEIGHTITLECTLFRKTPKNSKNTAAGGAPASSNDTSELHFDEKLAKIVLRKGAVDGKAMGKISIDFAKYIKGTTSTVFADLTLSNGSIVITKIEATMLHIGKKSKNGSRGGSDTLSEITDVYRDDDSIFGDGVSQDLGDLEHVTRSPNNLHGTFSSDIGMSPPSSVTPNDSPRRLVSSGKAATFTGHVPNRPQSLTSDSVNSLE---------------SSPELSADCSKRG-------KGQDGMKESPSLRDKLKTKLKERKGTKKAREDKSD-EAKSRAIPSSRSSAATTSKREKEKLVIPPELLSELKELKAQIHALKKENAKLKTTNKNANEEINALKADLNARELDLEDEKNKSVRGQKVSGTNAAPELSNTVKEKDRRIAELEAQNESLLEELEDNHEQQVESAQSYNASNNQIKDLKKKIEELEIALKREPRFLDVVNELKVTKVSLALANMEKEQALFQMQ 520
            +K   S+I   +GS+ HIGTTPYRFRI+IFVS V+ ++N   V VT ERRGN  AT L+ V   +A   HT+++E TLFR+   N+K     GAP+++ D  +L FDEK AK+VLRKG+  GKA+GKI ++ A YI+G TSTVFAD+ LSNGSI++T+IEATMLH+GKK KN S+ GS+  SE+TD    +DS+FGD    DLGD+E +  +P  + G       +SP SS + + +   L +  KA+     V N      S S +SL+               SS  L    S+RG       KG + +KESPSLR  LK               K + EA + A+P                    PE  +E+ ELK  + +LKKENAKLK + + A +EI+AL+ DL A E  LE      V  +  S    A E+S T+KEKD+ I  LEAQN+SLL+ELE+ H + V+ A    ++  QI  L+ KIE+LEIAL+REP+++DVVNELKVTKVSLALANMEKEQA F MQ
Sbjct:    1 MKNVSSRIHVGKGSMTHIGTTPYRFRIEIFVSYVDHVKNVSDVCVTWERRGNSEATNLVKVKENKAVFKHTLSMESTLFRRV-NNAK-----GAPSTNQD--QLQFDEKKAKVVLRKGSSTGKAIGKIHLNMADYIRGPTSTVFADMKLSNGSIIVTRIEATMLHMGKKKKNDSKAGSEACSEMTDANSIEDSLFGDD-DADLGDIE-IETTPVPVEGKTPGAAVLSPVSSASASSTTASLTT--KASGLDDLVGNGSMKEASSSPSSLKGTSGAQEDSYGPASSSSAALRNKSSQRGPRSLKSVKGDEELKESPSLR--LKXXXXXXXXXXXXDPSKGEKEASTGALPPQ-----------------SPERAAEVAELKNLVESLKKENAKLKASKQAAMDEIDALRTDLEACEAALE------VGSRSASQPRGALEMSKTLKEKDKTITALEAQNDSLLQELEELHNEAVQGAGGVESA--QITSLQNKIEDLEIALRREPQYMDVVNELKVTKVSLALANMEKEQAQFAMQ 496          
BLAST of Ggra7605.t1 vs. uniprot
Match: A0A1X6PA29 (C2 NT-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PA29_PORUM)

HSP 1 Score: 160 bits (406), Expect = 1.900e-39
Identity = 166/557 (29.80%), Postives = 241/557 (43.27%), Query Frame = 0
Query:    5 VKDLIKRSGSKIAAQQGSVKHIGTTPYRFRIDIFVSGVERIQNAGQVSVTCERRGNRHATPLMNVLNGRAEIGHTITLECTLFRKTPKNSKNTAAGGAPASSNDTSELHFDEKLAKIVLRKGAVDGKAMGKISIDFAKYIKGTTSTVFADLTLSNGSIVITKIEATMLHIGKKSKNGSRG----------GSDTLSEITDVYRDDDSIFGDGVSQDLGDLEHVTRSPNNLHGTFSSDIGMSPPSSVTPNDSPRRLVSSGKAATFTGHVPNRPQSLTSDSVNSLESSPELSADCSKRG-----------KGQDGMKESPSLRDKLKTKLKERKGTKKAREDKS------------------DEAKSRAIPSSRSSAATTSKREKEKLVIPPELLSELKELKAQIHALKKENAKLKTTNKNANEEINALKADLNARELDLEDEKNKSVRGQKVSGTNAAPELS---NTVKEKDRRIAELEAQNESLLEELEDN--HEQQVESAQSYNASNNQIKDLKKKIEELEIALKREPRFLDVVNELKVTKVSLALANMEKEQALF 517
            +K +IKRS SK+ A +GS+ HIG+TP +FRID FV  V+ +     V V  ERR     T  +   +G+A     + L+ TLFR+        A GG            FDEK AK  L+K   DGK + K+ ++ A Y++GT+  +FAD+ LSNG  + +K+EAT+L  GK  K G  G          GS  L+++     DDDSIF DG   DL DLE   R+        ++  G + P S T + S                                                         KG+   K S         K  ER G+    E KS                  D     +  +S  +    ++++   LV          EL+ +I  L+K N +L+   K+AN E++AL+A+L A                +V+G+ AA E     +T+K   R +  L  +N  LLEE+E+    ++   SA +    N +   L  +I++L   L REP FL VV +LKV KV LA A  +KEQA+F
Sbjct:    6 IKGVIKRSSSKLGAGKGSIAHIGSTPSKFRIDFFVQYVDGVSCDDGVCVVYERRDTTLVTKAVMAKDGKAVFRENMALQVTLFRR--------ADGGGDGPK-------FDEKKAKFALKKNDADGKTLAKVHLNLADYVQGTSGAMFADVKLSNGMTMASKVEATLLSSGK-GKGGGDGASSKMSAMTTGSGGLNDVDSSIGDDDSIFDDGDLDDLNDLEETARA--------AAGKGTAVPPSPTGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEGPTKSSSKRILSKIAKKSERSGSIAGIEKKSKXXXXXXXXXXXXXXXMADGGSGTSAVASSDNVRAHAEKDSAPLVA---------ELRKRITTLEKANGRLQIDLKDANTEMDALQAELEA------------ATTSEVTGSKAAAEAKKQKDTIKALQREVHTLTLENAGLLEEIEERCADDEDASSASAIERLNQKNAALVSEIQDLTQKLGREPEFLKVVEQLKVIKVQLATAIEDKEQAVF 517          
BLAST of Ggra7605.t1 vs. uniprot
Match: A0A7S1TB17 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB17_9RHOD)

HSP 1 Score: 84.3 bits (207), Expect = 9.010e-14
Identity = 56/187 (29.95%), Postives = 90/187 (48.13%), Query Frame = 0
Query:    9 IKRSGSKIAAQQGSVKHIGTTPYRFRIDIFVSGVERIQN-AGQVSVTCERRGNRHATPLMNVLNGRAEIGHTITLECTLFRKTPKNSKNTAAGGAPASSNDTSELHFDEKLAKIVLRKGAVDGKAMGKISIDFAKYIKGTTSTVFADLTLSNGSIVITKIEATMLHIGKKSKN-GSRGGSDTLSEIT 193
            IK   SK       V H+  TP++F   + V  V  I+N AG+V V  ERR    +T L  V + +      + +E TL++K                        ++ K+AK  +R G+ DG+ +GKI +D +K+ +  +  V  DL LSNGS+++ KIE  +   G++ +  GS  GS+  +  T
Sbjct:   12 IKAVLSKKVNVASRVGHLAATPFKFDYSVMVVEVNNIKNSAGEVCVVWERRDKIVSTRLEKVASKKVGFRVALNMEVTLYKK-------------------REAADYEPKMAKFAVRMGSADGRTVGKIHVDISKFARVPSGAVSQDLQLSNGSVLVLKIETRLNMSGRQRRGPGSTAGSERSALTT 179          
The following BLAST results are available for this feature:
BLAST of Ggra7605.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IWQ76.290e-21466.17C2 NT-type domain-containing protein n=1 Tax=Graci... [more]
R7QRX41.150e-10745.05C2 NT-type domain-containing protein n=1 Tax=Chond... [more]
A0A1X6PA291.900e-3929.80C2 NT-type domain-containing protein n=1 Tax=Porph... [more]
A0A7S1TB179.010e-1429.95Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 422..484
NoneNo IPR availableCOILSCoilCoilcoord: 361..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..465
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..331
IPR019448NT-type C2 domainPFAMPF10358NT-C2coord: 47..173
e-value: 4.1E-8
score: 33.1
IPR019448NT-type C2 domainPROSITEPS51840C2_NTcoord: 23..175
score: 14.730381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:292860..294452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7605.t1Ggra7605.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 292860..294452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7605.t1 ID=Ggra7605.t1|Name=Ggra7605.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=531bp
MAQRVKDLIKRSGSKIAAQQGSVKHIGTTPYRFRIDIFVSGVERIQNAGQ
VSVTCERRGNRHATPLMNVLNGRAEIGHTITLECTLFRKTPKNSKNTAAG
GAPASSNDTSELHFDEKLAKIVLRKGAVDGKAMGKISIDFAKYIKGTTST
VFADLTLSNGSIVITKIEATMLHIGKKSKNGSRGGSDTLSEITDVYRDDD
SIFGDGVSQDLGDLEHVTRSPNNLHGTFSSDIGMSPPSSVTPNDSPRRLV
SSGKAATFTGHVPNRPQSLTSDSVNSLESSPELSADCSKRGKGQDGMKES
PSLRDKLKTKLKERKGTKKAREDKSDEAKSRAIPSSRSSAATTSKREKEK
LVIPPELLSELKELKAQIHALKKENAKLKTTNKNANEEINALKADLNARE
LDLEDEKNKSVRGQKVSGTNAAPELSNTVKEKDRRIAELEAQNESLLEEL
EDNHEQQVESAQSYNASNNQIKDLKKKIEELEIALKREPRFLDVVNELKV
TKVSLALANMEKEQALFQMQAMQHKLGIIT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019448NT-C2