Ggra7594.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7594.t1
Unique NameGgra7594.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length213
Homology
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A2V3IVF7 (Protein RER1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVF7_9FLOR)

HSP 1 Score: 283 bits (725), Expect = 5.020e-92
Identity = 150/212 (70.75%), Postives = 161/212 (75.94%), Query Frame = 0
Query:    1 MARLDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVTRPQXXXXXXXXXXPARTAPVPTVQVKKSPALSQ 212
            + RLDRQ QI LDRIAP+KL+RW+ L  LL +F+LR                    QFILFLQPKDRASL+ARA S  +D  P LPTAD DEFRPFVRRLPEFKFWYSTTYAT LAF ATFFKVFDVPVFWPVLLFYF++LFVATMRRQW DMK LKYVPWDIGTKKVYKSDPKRVSVTRPQ          PAR APVPTV VKK+ ALSQ
Sbjct:  181 ILRLDRQTQILLDRIAPYKLHRWLALTALLCIFMLRMFLLEGFYIVTYVLFIFILNQFILFLQPKDRASLVARAASP-DDSGPVLPTADDDEFRPFVRRLPEFKFWYSTTYATFLAFCATFFKVFDVPVFWPVLLFYFVLLFVATMRRQWYDMKRLKYVPWDIGTKKVYKSDPKRVSVTRPQQHQPSAPPTNPARAAPVPTVPVKKTAALSQ 391          
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A7S1TKE0 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TKE0_9RHOD)

HSP 1 Score: 160 bits (404), Expect = 7.570e-46
Identity = 85/177 (48.02%), Postives = 109/177 (61.58%), Query Frame = 0
Query:    6 RQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVTRPQ 182
            R+ Q+ LDR  P  ++RW+    +L  F+ R                    QF+LF+QPKDR++L+A        D P+LP +D D+FRPF R LPEFKFWYS   A+LLA   TF  V D+PV+WPVLLFYFI+LFVATMRRQ  DMK  KYVPWD+G K+    +P  V+  RP+
Sbjct:   41 RREQVLLDRWTPKMVHRWMAFVAVLVCFMTRVLIVKGFYVVVYVFFIFLLNQFLLFVQPKDRSALVA--------DGPSLPLSDSDDFRPFYRSLPEFKFWYSAFRASLLALTCTFVPVLDIPVYWPVLLFYFIILFVATMRRQLQDMKRFKYVPWDLGKKRPNGPNPMVVNSNRPK 209          
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A5J4YVP6 (Protein RER1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVP6_PORPP)

HSP 1 Score: 158 bits (400), Expect = 6.850e-44
Identity = 90/182 (49.45%), Postives = 108/182 (59.34%), Query Frame = 0
Query:    1 MARLDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTA---DGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVT 179
            M +  R+  +FLD+I P  LYRW+   V+L  F LR                    QFILFLQPKDR++L     S A+ D P LPT    D D +RPF RRLPEFKFW+S T ATLLA   TF    DVPVFWP+L+ Y ++LF ATMR+Q  DMK  KYVPWDIG K+ Y    K V+ T
Sbjct:  121 MDQASRRYSVFLDQITPLILYRWLAFVVVLLSFALRMFMIHGFYIVAYVLFIFLLNQFILFLQPKDRSAL--GDNSAADSDEPGLPTTSVVDFDTYRPFYRRLPEFKFWHSATRATLLAIVCTFVPFLDVPVFWPILVVYSVVLFFATMRKQLADMKRFKYVPWDIGKKQKYSGTSKSVAST 300          
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A7S0ZAA9 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAA9_9RHOD)

HSP 1 Score: 151 bits (381), Expect = 1.530e-41
Identity = 84/179 (46.93%), Postives = 108/179 (60.34%), Query Frame = 0
Query:    2 ARLDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTA-DGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVSVT 179
            A + R+  +FLD+I P +LYRW+  A+   + +LR                    QFILFLQPKDR+ L     S++ED A  LPT  D D +RPF RRLPEFKFW+S+  A L++   T     DVPVFWP+L+ Y ++LF+ATMRRQ +DMK  KYVPWDI  K+ Y    K VS T
Sbjct:   84 AAIQRRYSVFLDQITPLQLYRWLAFALFALILVLRVFLIHGFYIVLYVLFIFLLNQFILFLQPKDRSMLQDSQGSSSEDQA--LPTVVDADTYRPFYRRLPEFKFWHSSMKAVLISLLCTCIPFLDVPVFWPILVVYSVILFIATMRRQIMDMKRFKYVPWDIKPKQKYAGTSKSVSST 260          
BLAST of Ggra7594.t1 vs. uniprot
Match: M2Y7A2 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7A2_GALSU)

HSP 1 Score: 149 bits (375), Expect = 4.190e-41
Identity = 87/177 (49.15%), Postives = 108/177 (61.02%), Query Frame = 0
Query:    1 MARLDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSDPKRVS 177
            +  L  + Q FLD++ P  LYRWV    +L LFL+R                     FILFLQP+DR +L   A+S AE   P LP +  DEFRPFVRRLPEFKFW S T AT+L   AT F++ D+PVFWP+L+ YFIMLFVATMRRQ  DM    Y+P++ G +K Y S  K V+
Sbjct:    4 LVALRNKYQTFLDKLTPFILYRWVCFGNILVLFLVRIFLAQGFYIIAYVLFIYLLNLFILFLQPQDREAL---ASSNAE--GPTLPVSSSDEFRPFVRRLPEFKFWLSATRATILCLFATAFRILDIPVFWPILVIYFIMLFVATMRRQIADMIQYHYLPFNFGKRK-YTSSTKFVA 174          
BLAST of Ggra7594.t1 vs. uniprot
Match: U9TU55 (Protein RER1 n=6 Tax=Rhizophagus TaxID=1129544 RepID=U9TU55_RHIID)

HSP 1 Score: 146 bits (368), Expect = 1.080e-40
Identity = 75/165 (45.45%), Postives = 99/165 (60.00%), Query Frame = 0
Query:    2 ARLDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTK 166
            A  D++ Q FLD + P+  YRW+G  V+L LF+LR                     F+ FLQPK   SL    T    ++ P+LPT   +EF+PF+RRLPEFKFWYS+T A +++   TFF  FD+PVFWP+LL YF +LF  TM+RQ   M+   YVP+DIG K
Sbjct:   23 AAFDKRYQKFLDEVTPYYAYRWIGTVVILGLFMLRIFILQGFYIVTYALGIYLLNLFLAFLQPKFDPSLEMDITENEGEEGPSLPTQADEEFKPFIRRLPEFKFWYSSTKAIVISLFCTFFPFFDIPVFWPILLIYFCILFAITMKRQIKHMRKYNYVPFDIGKK 187          
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A397V6V1 (Protein RER1 n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V6V1_9GLOM)

HSP 1 Score: 144 bits (362), Expect = 9.470e-40
Identity = 75/167 (44.91%), Postives = 103/167 (61.68%), Query Frame = 0
Query:    4 LDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTKKVYK 170
            L+R+ Q FLD + P+ +YRW+  A+L  LF++R                     F+ FLQPK   SL      +  ++ P+LPT   +EFRPF+RRLPEFKFW+S+T A +++   TFF +FD+PVFWP+LL YF +LF  TM+RQ   M   KY+P+DIG KK YK
Sbjct:   30 LERKYQKFLDEVTPYVIYRWISTAILTLLFMIRIISLQGFYIVTYALGIYLLNLFLAFLQPKFDPSLEMDIAESEVEEGPSLPTKADEEFRPFIRRLPEFKFWHSSTKAVIISLICTFFSMFDIPVFWPILLIYFCILFAITMKRQIKHMIKYKYIPFDIG-KKHYK 195          
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A397I5J1 (Protein RER1 n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397I5J1_9GLOM)

HSP 1 Score: 143 bits (360), Expect = 2.070e-39
Identity = 97/164 (59.15%), Postives = 119/164 (72.56%), Query Frame = 0
Query:    4 LDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASL-LARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTK 166
            LDR+ Q FLD + P+   RW+   +LL LF+   XXXXXXXXXXXXXXXXXXX F+ FLQPK   SL +  A S AE++ P+LPT   +EFRPF+RRLPEFKFWYS+T AT ++   TFF +FDVPVFWP+LL YF +LF  TM+RQ   M   KY+P+DIG K
Sbjct:   30 LDRRYQKFLDTVTPYTAPRWLSTILLLALFMXXXXXXXXXXXXXXXXXXXXXXXFLAFLQPKFDPSLEMDIAESNAEEEGPSLPTKADEEFRPFIRRLPEFKFWYSSTKATTISMFCTFFSIFDVPVFWPILLIYFSILFAITMKRQIKHMIKYKYIPFDIGKK 193          
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A433PUK5 (Protein RER1 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PUK5_9FUNG)

HSP 1 Score: 142 bits (359), Expect = 2.530e-39
Identity = 75/171 (43.86%), Postives = 100/171 (58.48%), Query Frame = 0
Query:    2 ARLDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTKKVYKSD 172
            +  +R+ Q +LD + P+  YRW+G A LL L+ LR                     F+ FLQPK   SL         ++ P+LPT   +EFRPF+RRLPEFKFWYS T A  +AF  +FF++FD+PVFWP+LL YF +LF  TMRRQ   M   +YVP+D G K   K++
Sbjct:   23 SAFERRWQQYLDEVTPYTNYRWIGTASLLLLYALRVFTAQGWYIVTYALGIYLLNLFLAFLQPKFDPSLEMDIQENEVEEGPSLPTKADEEFRPFIRRLPEFKFWYSATRAISIAFFCSFFRIFDIPVFWPILLVYFFILFYITMRRQIKHMIKYRYVPFDFGKKSYTKNN 193          
BLAST of Ggra7594.t1 vs. uniprot
Match: A0A397T5I4 (Protein RER1 n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T5I4_9GLOM)

HSP 1 Score: 142 bits (358), Expect = 3.900e-39
Identity = 74/163 (45.40%), Postives = 97/163 (59.51%), Query Frame = 0
Query:    4 LDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTXXXXXXXXXXXXXXXXXXXQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRLPEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQWLDMKHLKYVPWDIGTK 166
            L+++ Q FLD + P+  YRW+   V+L LF+LR                     F+ FLQPK   SL    T    ++ P+LPT   +EF+PF+RRLPEFKFWYSTT A +++   TF   FD+PVFWP+LL YF +LF  TM+RQ   M   KYVP+DIG K
Sbjct:   29 LEKRYQKFLDEVTPYYAYRWIATVVILLLFMLRIFTIQGFYIITYALGIYLLNLFLAFLQPKFDPSLEMDITENEGEEGPSLPTQADEEFKPFIRRLPEFKFWYSTTKAVIISLICTFIPFFDIPVFWPILLIYFCILFAITMKRQIKHMIKYKYVPFDIGKK 191          
The following BLAST results are available for this feature:
BLAST of Ggra7594.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVF75.020e-9270.75Protein RER1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
A0A7S1TKE07.570e-4648.02Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YVP66.850e-4449.45Protein RER1B n=1 Tax=Porphyridium purpureum TaxID... [more]
A0A7S0ZAA91.530e-4146.93Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2Y7A24.190e-4149.15Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
U9TU551.080e-4045.45Protein RER1 n=6 Tax=Rhizophagus TaxID=1129544 Rep... [more]
A0A397V6V19.470e-4044.91Protein RER1 n=2 Tax=Gigaspora TaxID=4873 RepID=A0... [more]
A0A397I5J12.070e-3959.15Protein RER1 n=1 Tax=Diversispora epigaea TaxID=13... [more]
A0A433PUK52.530e-3943.86Protein RER1 n=1 Tax=Endogone sp. FLAS-F59071 TaxI... [more]
A0A397T5I43.900e-3945.40Protein RER1 n=1 Tax=Glomus cerebriforme TaxID=658... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 3..169
e-value: 1.3E-60
score: 204.0
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 3..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..212
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availableTMHMMTMhelixcoord: 43..62
NoneNo IPR availableTMHMMTMhelixcoord: 103..122
NoneNo IPR availableTMHMMTMhelixcoord: 127..144
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:260915..261553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7594.t1Ggra7594.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 260915..261553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7594.t1 ID=Ggra7594.t1|Name=Ggra7594.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=213bp
MARLDRQMQIFLDRIAPHKLYRWVGLAVLLTLFLLRTFLLEGFYIVIYVL
FIFILNQFILFLQPKDRASLLARATSTAEDDAPALPTADGDEFRPFVRRL
PEFKFWYSTTYATLLAFGATFFKVFDVPVFWPVLLFYFIMLFVATMRRQW
LDMKHLKYVPWDIGTKKVYKSDPKRVSVTRPQPQPAATATSAPARTAPVP
TVQVKKSPALSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1