Ggra7593.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7593.t1
Unique NameGgra7593.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length410
Homology
BLAST of Ggra7593.t1 vs. uniprot
Match: A0A2V3IVK5 (Ubiquitin carboxyl-terminal hydrolase 17-like protein E n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVK5_9FLOR)

HSP 1 Score: 493 bits (1269), Expect = 3.690e-171
Identity = 241/352 (68.47%), Postives = 281/352 (79.83%), Query Frame = 0
Query:    8 SSSAVLQNLPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRAGRRVQPPVIVALVDALRQSWRHDGRQHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERMLWLHIPVNHTSADVACMLDDYFSPQPIDGLRRGGRRVQAMETRSLIPEYAAIRETGETTSAERYLFNVITIPVAIRRFDMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFYDLGDGSLPGKERYARMQFLADRKLAEQVQLQEDESGAMAQQTM 359
            S S  L+NLPN+GN+CYLSSTLVSLF+ TD+FDGLLT SPRAP+ LR+AL  +V  +R G+   PP + ALV AL  +WRH+GRQHDAAEFLS LLDALRAPF+P+MR F+H   PD +D ALCTER+LWL I  N+  A V+ ML DYFS Q I GL+RGG+ V A E R LIPEYAA+RETGETT+AERYLF+VI IPVAI RFD+RG KLRT V + VQIDARKYLR FA D Q FMTLCA+ICHRG S +SGHYVAYTRAGA +WRRWND+R G VE     SDGLP   +WRDE+++DAYLLFYDLGDGSLPG+ER+  +QFLADRKLAEQVQLQED+ GA  QQ +
Sbjct:    7 SPSVALRNLPNVGNTCYLSSTLVSLFLGTDSFDGLLTTSPRAPSNLRKALVHVVTVVRDGKTPSPPDLRALVSALHPAWRHNGRQHDAAEFLSHLLDALRAPFIPMMRTFSHAGAPDANDSALCTERILWLQIATNNAHATVSSMLQDYFSAQSIQGLQRGGKSVDATEVRVLIPEYAAMRETGETTAAERYLFHVINIPVAISRFDVRGNKLRTSVHISVQIDARKYLRNFAADNQWFMTLCAVICHRGASISSGHYVAYTRAGAREWRRWNDMRGGAVERCESSSDGLPTRGEWRDELRKDAYLLFYDLGDGSLPGRERHRMLQFLADRKLAEQVQLQEDQHGAFRQQLL 358          
BLAST of Ggra7593.t1 vs. uniprot
Match: R7QFM5 (USP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFM5_CHOCR)

HSP 1 Score: 249 bits (637), Expect = 4.320e-75
Identity = 152/349 (43.55%), Postives = 194/349 (55.59%), Query Frame = 0
Query:   14 QNLPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRAGRRVQPPVIVALVDALRQSWRHDGR-QHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERMLWLHIPVNHTSAD---VACMLDDYFSPQPIDGLRRGGRRVQAMETRSLIPEYAAIRETGETTSAERYLFNVITIPVAIRRFDMR-GKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELS-AVQSDGLPKSSDWRDEIKRDAYLLFYDL--GDGSLPGKERYARMQFLADRKLAEQVQLQEDESGAM 354
            +N  N GNSCY+SS LVSLF   DA D LL     AP PL +AL   V  +R+ + V  P + AL  AL  +  H G  Q D AE L+ L DAL APF+PL     H   PD  D    TER+LWL +P    SA    +  +LDDYF  Q   GLRR G  V A   +SL+P Y   RETGET  A R+ F  +T+P+A++RF    G+K R  V +   +D   Y+ +FA   +  M L +++CHRG S  +GHYVAYT      WR+WNDL  G V  +    + G P+   W +EI RD+YLL Y+L  GDG + G      +Q LAD  LA Q Q QED S A+
Sbjct:   18 RNFRNAGNSCYISSLLVSLFADFDALDALLL----APTPLCDALRRAVNLVRSAQPVSLPRVRALRAALIDAGWHRGTGQQDVAELLAFLFDALSAPFVPLYNNILHARTPDPADHVPSTERLLWLDVPPPPPSAPRVHLRALLDDYFFAQTRPGLRRQGVGVDATVAKSLLPFYTPDRETGETVRATRHKFRYLTLPLALKRFGAHSGEKRRDPVSIPTALDCTDYVNEFAGGARYSMLLRSVVCHRGPSIGAGHYVAYTYGPRVGWRQWNDLDEGAVRSARGSAATGEPEREMWAEEIARDSYLLLYELVPGDGEVKGAAWRTELQILADAHLAAQRQFQEDRSAAL 362          
BLAST of Ggra7593.t1 vs. uniprot
Match: A0A507BZH5 (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BZH5_9FUNG)

HSP 1 Score: 112 bits (280), Expect = 3.950e-23
Identity = 103/337 (30.56%), Postives = 156/337 (46.29%), Query Frame = 0
Query:   14 QNLPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPA--PLREALSMLVAAIRAGRRVQPPVIVALVDALRQ--SWRHDGRQHDAAEFLSQLLD--ALRAPFLPLMRCFTHDAPPDRDDEALCTERMLWLHIPVNHTSADVACMLDD----YFSPQPIDGLR----RGGRR--VQAMETRSLIP--EYAAIRETGETTSAERYLFNV-ITIPVAIRRFDMRGKKLRTKVQVRVQIDARKYLRKFATD-----KQLFMTLCAIICHRGQSRNSGHYVAYT---RAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFYDL-GDGS 322
            Q L N GN+CYL S + + FV    FD LL  S   PA   ++  L  +V  +R G+ V PP I  L+  L Q  S      Q DA+EF   L+    L+AP LPL++   +D      DE    ER+L L IP +  ++     ++D    YF    I   R    RG  R  V+A     LIP  ++     T    S+   L N  + +PVA++R+D  G++L  ++ +  QI    + ++             + L ++ICH G S +SGHYV+Y         +W  ++DLR   +    V+   L   +   +++   AYLL Y L  DG+
Sbjct:   71 QGLVNAGNTCYLDSVVFACFVNASPFDFLLLKSASNPAVREIQVTLRFIVNQLRTGKLVMPPTIQKLLFDLAQVGSPFTSTTQCDASEFFLFLMSDLCLQAPDLPLVQRLVYDGSSTIRDETHMRERILQLGIPKDDRTSKTLLTVEDLLFSYFFDNQISVTRELDTRGRNRILVEAWAATKLIPVVDFGGRDATWSWFSS---LGNANMVVPVALKRYDETGQRLARRIVIPPQIPFGLFAQQLGNSHTSNRSHYTLVLKSVICHHGNSIDSGHYVSYVCTESLNGEEWVLFDDLR---IPQRVVRFSDLKSETAAFEQMSTTAYLLLYQLVADGA 401          
BLAST of Ggra7593.t1 vs. uniprot
Match: ubiquitin carboxyl-terminal hydrolase 42 isoform X1 n=3 Tax=Strigops habroptila TaxID=2489341 RepID=UPI0011CF696A (ubiquitin carboxyl-terminal hydrolase 42 isoform X1 n=3 Tax=Strigops habroptila TaxID=2489341 RepID=UPI0011CF696A)

HSP 1 Score: 75.5 bits (184), Expect = 7.070e-11
Identity = 82/334 (24.55%), Postives = 142/334 (42.51%), Query Frame = 0
Query:   16 LPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRAGR-------RVQPPVIVALVDALRQSWRHDGRQHDAAEFLSQLLDALRAPFL-------------------------PLMRCFTHDAPPDRDDEALCTERMLWLHIPVNHTSADVACMLDDYFSPQPIDGLRRGGRRVQAMETRSLIPEYAAIRETGETTSAERYLFNVITIPVAIRRF-DMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFY 316
            L N+GN+C+L+STL  L       + +L+         ++   M        R        ++P  +++ +  + + +R+ G Q DA EFLS  +DAL+   L                           ++C +  A  DR +      R + L I    T+  V   L+ +  P+ +DG        +    ++++P  A+ R T   +S       V+TI  +++RF D  G K+   V+    +D R Y+ + +T + L   L A++ H G S N+GHY+ + +AG   W R ND               + + SD +  + + AYLLFY
Sbjct:  109 LQNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTKSCHAKDFCMMCTLEAHINRVLCSSNNAIKPTSVISGLKRIGKHFRY-GSQEDAHEFLSFTVDALQKACLNESTTLDVSSQATTLIYQIFGGYLRSQVKCLSCKAVSDRYEPF----RDITLDI---ETATSVTEALEQFVKPEQLDG----ENSYKCSNCKNMVP--ASKRYTIHRSS------KVLTI--SLKRFADFDGGKINKDVKYPEYLDLRAYMSQ-STGEPLIYALYAVLVHSGFSCNAGHYICFVKAGNGFWYRMNDA--------------IVERSDIKTVLNQQAYLLFY 405          
BLAST of Ggra7593.t1 vs. uniprot
Match: A0A6J1MUS3 (Ubiquitin carboxyl-terminal hydrolase n=9 Tax=Satyrini TaxID=127320 RepID=A0A6J1MUS3_BICAN)

HSP 1 Score: 75.1 bits (183), Expect = 8.200e-11
Identity = 84/333 (25.23%), Postives = 147/333 (44.14%), Query Frame = 0
Query:   16 LPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRA---------GRRVQPPVIVALVDALRQSWRH--DGRQHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERML--WLHIPVNHTSADVACMLDDYFSPQPIDGLRRGGRRVQAMET---RSLIPEYAAIRET-GETTSAERYLF---NVITIPVAIRRFDMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFYD----LGDGSLP 324
            + N+GN+CYL+STL +LF    AF   L           +  + ++  +RA         G  ++P  + +    LR   RH   GRQ DA EFL  L++A+   +L   R    D       E     ++L  +L   V   +         +F    +D +R+     +A+++   R  + +     E   +  SA +  F     + + +A++RF + G KL   VQ R +I+  KY+    + +QL   L +++ H G S+N GHY A  +A  S + +++D     + LSAV              +  +AY++F++    + D S+P
Sbjct:  126 MQNVGNTCYLNSTLQALF-HVPAFANWLVSEAAHAEKCNQQEACVICGMRATLMATQKSGGAPIKPWQVYS---KLRLICRHLTPGRQEDAHEFLRYLVEAMEKSYLS--RFINADKLDQYSKETTPLNQILGGYLRSTVRCLACHHLSTTYQHFEDLLLD-IRKHSTLDEALDSFFSRERLEDLGYKCEACNKKVSATKQFFVERAPMVLCIALKRFSLAGGKLSKHVQFRKKINLNKYMYNKNSPQQLSYKLVSMVTHLGPSQNCGHYTAIGQAPNSNYYQFDDSCVRPLPLSAV--------------LGTNAYIMFFEKDNTMEDCSIP 437          
BLAST of Ggra7593.t1 vs. uniprot
Match: A0A212F3Z2 (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Danaus TaxID=13036 RepID=A0A212F3Z2_DANPL)

HSP 1 Score: 74.7 bits (182), Expect = 1.100e-10
Identity = 81/322 (25.16%), Postives = 141/322 (43.79%), Query Frame = 0
Query:   16 LPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRA---------GRRVQPPVIVALVDALRQSWRH--DGRQHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERML--WLHIPVNHTSADVACMLDDYFSPQPIDGLRRGGRRVQAMET---RSLIPEYAAIRET-GETTSAERYLF---NVITIPVAIRRFDMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFYD 317
            + N+GN+CYL+STL +LF    AF   L           +  + ++  +RA         G  ++P  + +    LR   +H   GRQ DA EFL  L++A+   +L   R    D       E     ++L  +L   V   +         +F    +D +R+     +A+++   R  + +     E   +  SA +  F     + + +A++RF + G KL   VQ R +I+  KY+       QL   L +++ H G S+NSGHY A  +A  S + +++D     + LSAV              +  +AY++F++
Sbjct:  126 MQNVGNTCYLNSTLQALF-HVPAFANWLVSDCTHAEKCNQEEACVICGMRATLMATQKSGGAAIKPWQVYS---KLRLICKHLTPGRQEDAHEFLRYLVEAMEKCYLS--RLINADKLDQYSKETTPLNQILGGYLRSTVRCLACHHLSTTYQHFQDLLLD-IRKHSTLDEALDSFFSRERLEDLGYKCEACNKKVSATKQFFIERAPMVLCIALKRFSLAGGKLSKHVQFRKKINLNKYIYNKNNPHQLSYKLVSLVTHLGPSQNSGHYTAIGQAPNSNYYQFDDSCVRPIPLSAV--------------LGTNAYIMFFE 426          
BLAST of Ggra7593.t1 vs. uniprot
Match: A0A194QNZ5 (Ubiquitin carboxyl-terminal hydrolase n=7 Tax=Papilio TaxID=7145 RepID=A0A194QNZ5_PAPMA)

HSP 1 Score: 74.7 bits (182), Expect = 1.100e-10
Identity = 79/297 (26.60%), Postives = 135/297 (45.45%), Query Frame = 0
Query:   16 LPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRA---------GRRVQPPVIVALVDALRQSWRH--DGRQHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERML--WLHIPVNHTSADVACMLDDYFSPQPIDGLRRGGRRVQAMET---RSLIPEYAAIRET-GETTSAERYLF---NVITIPVAIRRFDMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAV 292
            + N+GN+CYL+STL +LF      + L+T S  A     +  + ++  +RA         G  ++P  + +    LR   RH   GRQ DA EFL  L++A+   +L   R    D       E     ++L  +L   V   +         +F    +D +R+     +A+++   R  + +     E   +  SA +  F     + + +A++RF + G KL   VQ R +I+  KY+      +QL   L +++ H G S+N GHY A  +A  S + +++D     + LSAV
Sbjct:  125 MQNVGNTCYLNSTLQALFHVPAFANWLVTESTHAE-KCNQQEACVICGMRATLMATQKSGGAPIKPWQVYS---KLRLICRHLTPGRQEDAHEFLRYLVEAMEKCYLT--RFVNSDKLDQYSKETTPLNQILGGYLRSTVRCLACHHLSTTYQHFQDLLLD-IRKHSTLDEALDSFFSRERLEDLGYKCEACNKKVSATKQFFVERAPMVLCIALKRFSLAGGKLSKHVQFRKKINLSKYIYNKNNPQQLTYKLVSLVTHLGPSQNCGHYTAIGQAPNSNYYQFDDSCVRPLPLSAV 414          
BLAST of Ggra7593.t1 vs. uniprot
Match: A0A7K9CQN2 (UBP42 hydrolase (Fragment) n=1 Tax=Hemiprocne comata TaxID=243314 RepID=A0A7K9CQN2_9AVES)

HSP 1 Score: 74.7 bits (182), Expect = 1.230e-10
Identity = 81/332 (24.40%), Postives = 142/332 (42.77%), Query Frame = 0
Query:   16 LPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRAGRRV----QPPVIVALVDALRQSWR--HDGRQHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERMLW------------------LHIPVNHTSADVACM------LDDYFSPQPIDGLRRGGRRVQAMETRSLIPEYAAIRETGETTSAERYLFNVITIPVAIRRF-DMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFY 316
            L N+GN+C+L+STL  L       + +L+         ++   M        + +     P    ++++ L++  R  H G Q DA EFLS  +DAL+        C       DR  +A      ++                   + P    S D+  +      L+ Y  P+ +DG        +  + + ++P  A+ R T   +S      NV+T+  +++RF +  G K+  +V+    +D R Y+ + +  + L   L A++ H G S N+GHY+ Y +AG  +W R ND     VELS +++            + + AY+LFY
Sbjct:  101 LLNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTQSCGEKDFCMMCAMETHINQVLCCSNAPIKPTSVINGLKRIGRNFHFGSQEDAHEFLSFTVDALQKA------CLNGSTKLDRSSQATTLIYQIFGGYLRSRVKCQNCKAVSDTYEPFLDISLDIKAVTSITRALEQYVKPEQLDG----ENSYKCSKCKKMVP--ASKRYTIHRSS------NVLTL--SLKRFANYTGGKINKEVKYPEYLDLRAYMSQ-SIGEPLIYALYAVLVHNGFSCNAGHYICYIKAGNGRWYRMNDA---SVELSDIKT-----------VLNQQAYVLFY 397          
BLAST of Ggra7593.t1 vs. uniprot
Match: ubiquitin carboxyl-terminal hydrolase 42 n=1 Tax=Chaetura pelagica TaxID=8897 RepID=UPI00052313E9 (ubiquitin carboxyl-terminal hydrolase 42 n=1 Tax=Chaetura pelagica TaxID=8897 RepID=UPI00052313E9)

HSP 1 Score: 74.7 bits (182), Expect = 1.330e-10
Identity = 81/332 (24.40%), Postives = 142/332 (42.77%), Query Frame = 0
Query:   16 LPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAPAPLREALSMLVAAIRAGRRV----QPPVIVALVDALRQSWR--HDGRQHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERMLW------------------LHIPVNHTSADVACM------LDDYFSPQPIDGLRRGGRRVQAMETRSLIPEYAAIRETGETTSAERYLFNVITIPVAIRRF-DMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFY 316
            L N+GN+C+L+STL  L       + +L+         ++   M        + +     P    ++++ L++  R  H G Q DA EFLS  +DAL+        C       DR  +A      ++                   + P    S D+  +      L+ Y  P+ +DG        +  + + ++P  A+ R T   +S      NV+T+  +++RF +  G K+  +V+    +D R Y+ + +  + L   L A++ H G S N+GHY+ Y +AG  +W R ND     VELS +++            + + AY+LFY
Sbjct:  109 LLNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTQSCGEKDFCMMCAMETHINQVLCCSNAPIKPTSVINGLKRIGRNFHFGSQEDAHEFLSFTVDALQKA------CLNGSTKLDRSSQATTLIYQIFGGYLRSRVKCMNCKAVSDTYEPFLDISLDIKAVTSITRALEQYVKPEQLDG----ENSYKCSKCKKMVP--ASKRYTIHRSS------NVLTL--SLKRFANYTGGKINKEVKYPEYLDLRAYMSQ-SIGEPLIYALYAVLVHNGFSCNAGHYICYIKAGNGRWYRMNDA---SVELSDIKT-----------VLNQQAYVLFY 405          
BLAST of Ggra7593.t1 vs. uniprot
Match: A0A8H7VE95 (USP domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VE95_9FUNG)

HSP 1 Score: 72.8 bits (177), Expect = 3.870e-10
Identity = 71/290 (24.48%), Postives = 116/290 (40.00%), Query Frame = 0
Query:   91 RQHDAAEFLSQLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERMLWLHIPV-NHTSADVACMLDDYFSPQPIDGLRRG-------------------GRRVQAMETRS--------------------------LIPEYAAIRETG---ETTSAERYLFNVITIPVAIRRFDM----RGKKLRTKVQVRVQIDARKYLRKFATDK---------QLFMTLCAIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKSSDWRDEIKRDAYLLFYDL 318
            +Q DA+E L  L +    PFLP      H A  D DD+ + T+R+L L IP  ++ +  +  +L D+F    + G++R                    G    A+ T S                          L+P Y+ I E G   E+ +   +  + + +PV ++R+      R  K +  V +   I   K+L + A D          +  M L +++CH+G S +SGHY+AY+R        W  L          +  G     +   E+ +D YL FY+L
Sbjct:  194 KQEDASELLLFLTETFDLPFLPFQMRLFHGANRDVDDDRVTTDRVLSLCIPSESNKTLRLEDILFDHFYSSIVTGVKRQIDWQGQQQRQQKQNQLSPPGSPTSAISTSSIAKTNIFFNEQQRQQEIAVNAWQVLELLPFYSGINEQGVRIESQNQRSFPDSRMVLPVILKRYRCTTLGRYVKDQRSVIIPPNIHFNKFLNQNAEDPICEGCGRKVEGIMRLRSVVCHKGNSPHSGHYIAYSRTIDRDNEIWLKLDDLSPTQRVKRLTGREHEEEIYRELGKDGYLFFYEL 483          
The following BLAST results are available for this feature:
BLAST of Ggra7593.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVK53.690e-17168.47Ubiquitin carboxyl-terminal hydrolase 17-like prot... [more]
R7QFM54.320e-7543.55USP domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A507BZH53.950e-2330.56Uncharacterized protein n=1 Tax=Synchytrium microb... [more]
ubiquitin carboxyl-terminal hydrolase 42 isoform X1 n=3 Tax=Strigops habroptila TaxID=2489341 RepID=UPI0011CF696A7.070e-1124.55ubiquitin carboxyl-terminal hydrolase 42 isoform X... [more]
A0A6J1MUS38.200e-1125.23Ubiquitin carboxyl-terminal hydrolase n=9 Tax=Saty... [more]
A0A212F3Z21.100e-1025.16Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Dana... [more]
A0A194QNZ51.100e-1026.60Ubiquitin carboxyl-terminal hydrolase n=7 Tax=Papi... [more]
A0A7K9CQN21.230e-1024.40UBP42 hydrolase (Fragment) n=1 Tax=Hemiprocne coma... [more]
ubiquitin carboxyl-terminal hydrolase 42 n=1 Tax=Chaetura pelagica TaxID=8897 RepID=UPI00052313E91.330e-1024.40ubiquitin carboxyl-terminal hydrolase 42 n=1 Tax=C... [more]
A0A8H7VE953.870e-1024.48USP domain-containing protein n=1 Tax=Mucor circin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 129..318
e-value: 2.7E-16
score: 61.5
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 15..128
e-value: 1.4E-10
score: 42.7
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 210..316
coord: 13..107
NoneNo IPR availableCDDcd02257Peptidase_C19coord: 16..316
e-value: 1.13319E-21
score: 91.3906
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 209..316
e-value: 1.5E-12
score: 47.6
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 16..107
e-value: 3.4E-6
score: 26.8
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 14..319
score: 21.849579
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 16..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:259062..260291 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7593.t1Ggra7593.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 259062..260291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7593.t1 ID=Ggra7593.t1|Name=Ggra7593.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=410bp
MNPPQFPSSSAVLQNLPNIGNSCYLSSTLVSLFVATDAFDGLLTPSPRAP
APLREALSMLVAAIRAGRRVQPPVIVALVDALRQSWRHDGRQHDAAEFLS
QLLDALRAPFLPLMRCFTHDAPPDRDDEALCTERMLWLHIPVNHTSADVA
CMLDDYFSPQPIDGLRRGGRRVQAMETRSLIPEYAAIRETGETTSAERYL
FNVITIPVAIRRFDMRGKKLRTKVQVRVQIDARKYLRKFATDKQLFMTLC
AIICHRGQSRNSGHYVAYTRAGASKWRRWNDLRRGEVELSAVQSDGLPKS
SDWRDEIKRDAYLLFYDLGDGSLPGKERYARMQFLADRKLAEQVQLQEDE
SGAMAQQTMLLQASEPFGYAYSSGAPNGARSVPLVVRRSAHIADVLFGET
GVWSDDDDS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf