Ggra7568.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7568.t1
Unique NameGgra7568.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length381
Homology
BLAST of Ggra7568.t1 vs. uniprot
Match: A0A2V3IS53 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS53_9FLOR)

HSP 1 Score: 222 bits (565), Expect = 1.920e-67
Identity = 121/235 (51.49%), Postives = 166/235 (70.64%), Query Frame = 0
Query:  148 MKIGFLSLVFYVAAIISDGTIFSPHRPSIAGNVASVLILIAMSALLYIRLVPESMQYSLLGGDLFQTIAFLLIILTTAVLLPAIAVISLNFVIFSVTFLWFFVEQSLSVFVAFVQFLGGLSLFNLQHTYLCLRQIYVNGSESEYEQQLVSNSERFLLQVRNNWFITKVPRFFLENADLSVRTVLSEHLHDQVDFIPFIDMESFASDEDEE---SSLTQPESEVNETTALLERTSG 379
            M I F++LVFY+AAI++DGT F+PHRP+IA   A+ LI+IA+S+LLYI +VP  MQ+ L G  +  + AFLLI+LT A +LP IA+I+LNF +F V F+ F ++  L+  +    F  GL+L++ QHTYLCLRQIY N SE +Y+QQL++ S++ L   R+NW + +VPR  L++AD +VRTVL EHLHD V+F PF  M S  S+ D+E   S   QP++   ETTALL RT G
Sbjct:    1 MNIAFVTLVFYIAAILADGTFFTPHRPTIATTTATALIMIALSSLLYITIVPARMQFVLFGAGILHSAAFLLIVLTCAFVLPGIAIITLNFTVFLVAFVGFLLDLMLTFLIGVFHFFRGLALYHAQHTYLCLRQIYSNLSEDDYDQQLLAYSDKLLRHARSNWNLHRVPRSLLDSADHAVRTVLPEHLHDDVEFAPFTTMGSLDSNHDQEDANSEQEQPQTLPTETTALLGRTPG 235          
BLAST of Ggra7568.t1 vs. uniprot
Match: R7QRI1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRI1_CHOCR)

HSP 1 Score: 221 bits (564), Expect = 1.470e-65
Identity = 137/343 (39.94%), Postives = 201/343 (58.60%), Query Frame = 0
Query:   43 ICKVARVAF-DASACRVARRQLQIRSSPCLWRVSVVSDVIRDTHRLLTPQHSELSRHEVRLLTRLDGCNSTEQCANEKVDCTYGIEDPSDAFWWREYNHDIKFVVMMKIGFLSLVFYVAAIISDGTIFSPHRP-SIAGNVASVLILIAMSALLYIRLVPESMQYSLLGGDLFQTIAFLLIILTTAVLLPAIAVISLNFVIFSVTFLWFFVEQSLSVFVAFVQFLGGLSLFNLQHTYLCLRQIYVNGSE--SEYEQQLVSNSERFLLQVRNNWFITKVPRFFLENADLSVRTVLSEHLHDQV--DFIPFIDMESFASDEDEESSLTQPESEVNETTALLERTSG 379
            ICKV  V F + S CR  +      + PC W++ VVS    D H +   +  + +  EV LL  LDGCNS+E C NE + C YGIEDPSDAFW R+Y+ + KFVVM +I F SL+F++ +IIS+G+I+ PH P S +   A+   +IA+SALLY+ +VP   Q SL G  L+Q+  +  IILT A  LP + V+ ++F +F++ FL FFVEQ L +    + +LG L  +  +HT   LR +Y  G++  +E ++Q++  SE FL +VR N F+ ++P    ++    V   L EHL D++  + +P ID E      DE +    P S    TT LL++  G
Sbjct:   28 ICKVVLVHFLEPSFCRDTKLSSPPDTEPCRWQIDVVSLKRPDVHLIGREEPEKYTPREVSLLRELDGCNSSESCKNESLPCAYGIEDPSDAFWLRKYDRESKFVVMFQIAFASLLFFLVSIISEGSIYYPHAPGSFSLLSAATFSIIALSALLYLIIVPREYQLSLYGQGLWQSFGYCCIILTVAAALPFLTVVWISFCLFAIYFLGFFVEQLLCMIGGTLYYLGALFAYQAEHTLYELRLMYGGGNQDQAEIDRQVLQMSETFLRRVRGNVFLYRIPEALEQDGIQVVGNTLPEHLFDEMVQENVPQIDFEGLDDSPDENA----PSSTPTVTTPLLQQNQG 366          
The following BLAST results are available for this feature:
BLAST of Ggra7568.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IS531.920e-6751.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QRI11.470e-6539.94Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..380
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 254..272
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 273..380
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 215..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..253
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
NoneNo IPR availableTMHMMTMhelixcoord: 10..29
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 211..233
NoneNo IPR availableTMHMMTMhelixcoord: 248..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:90137..91279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7568.t1Ggra7568.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 90137..91279 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7568.t1 ID=Ggra7568.t1|Name=Ggra7568.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=381bp
MPLSWRFRALTARYVAATAVLMALCVLFVPNKTAPARGVRVAICKVARVA
FDASACRVARRQLQIRSSPCLWRVSVVSDVIRDTHRLLTPQHSELSRHEV
RLLTRLDGCNSTEQCANEKVDCTYGIEDPSDAFWWREYNHDIKFVVMMKI
GFLSLVFYVAAIISDGTIFSPHRPSIAGNVASVLILIAMSALLYIRLVPE
SMQYSLLGGDLFQTIAFLLIILTTAVLLPAIAVISLNFVIFSVTFLWFFV
EQSLSVFVAFVQFLGGLSLFNLQHTYLCLRQIYVNGSESEYEQQLVSNSE
RFLLQVRNNWFITKVPRFFLENADLSVRTVLSEHLHDQVDFIPFIDMESF
ASDEDEESSLTQPESEVNETTALLERTSGT*
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