Ggra7560.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7560.t1
Unique NameGgra7560.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length254
Homology
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A2V3IVG4 (60S ribosomal protein L10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVG4_9FLOR)

HSP 1 Score: 386 bits (992), Expect = 1.480e-134
Identity = 199/209 (95.22%), Postives = 206/209 (98.56%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPIQAF 253
            MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVAR++IGQTLLSLRTKE+N+  ALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEY+ELKEQGRIIPDGSYCK++ NKGPIQAF
Sbjct:    1 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARIRIGQTLLSLRTKESNQNQALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYLELKEQGRIIPDGSYCKLSNNKGPIQAF 209          
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A7S2ZWG5 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWG5_9RHOD)

HSP 1 Score: 349 bits (895), Expect = 8.500e-120
Identity = 176/206 (85.44%), Postives = 195/206 (94.66%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPI 250
            MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLG+K+A VD+FPFAAH+VSDEKEQLSSEA+EAARVACNKYMTK  GK+AFH+RVR HPFHVLRINKMLSCAGADRLQTGMRGAFGKP GTVARVKIGQTLLS+R+++ NK H LEALRRAKYKFPGRQKLFIS +WGFT+F +E+Y++LKEQGRIIPDGS+CK+ TNKGPI
Sbjct:    1 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGKKKAHVDDFPFAAHMVSDEKEQLSSEAIEAARVACNKYMTKHAGKDAFHMRVRIHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTVARVKIGQTLLSVRSRDANKGHVLEALRRAKYKFPGRQKLFISRRWGFTQFDREDYIKLKEQGRIIPDGSHCKLLTNKGPI 206          
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A1X6PKW8 (Ribosomal_L16 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKW8_PORUM)

HSP 1 Score: 340 bits (873), Expect = 1.900e-116
Identity = 171/206 (83.01%), Postives = 193/206 (93.69%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPI 250
            MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRA VD+FPFAAH+VSDEKEQLSSEA+EAARVACNKYM+   GK+AFH+RVR HPFHVLRINKMLSCAGADRLQTGMRGAFGKP GTVARV IGQTLLS+R+K++NKA  LEALRRAKYKFPGRQK+++SS WGFT+F++EEY+ELK  G+IIPDG+YCK+ +NKGP+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAHVDDFPFAAHMVSDEKEQLSSEAIEAARVACNKYMSTQAGKDAFHMRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTVARVNIGQTLLSVRSKDSNKAIVLEALRRAKYKFPGRQKVYVSSNWGFTRFTREEYVELKAAGKIIPDGAYCKLQSNKGPL 206          
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A5J4YTG8 (60S ribosomal protein L10 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTG8_PORPP)

HSP 1 Score: 317 bits (811), Expect = 5.960e-107
Identity = 160/208 (76.92%), Postives = 182/208 (87.50%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPIQA 252
            MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRI+DLG+K+A VDEFP   HLVSDEK+QLSSEALEA+RV+CNKYM K  GK+ FH+R+R HPFHVLRINKMLSCAGADRLQTGMRGAFGKP G VARV IGQ LLSLRT+E+N  HA+EALRRAKYKFPGRQK+ +S+KWGFT+F+ EEY ELK+ G++IPDG Y K+   KG + A
Sbjct:    1 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIYDLGKKKATVDEFPVCVHLVSDEKQQLSSEALEASRVSCNKYMVKYGGKDTFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVSIGQVLLSLRTRESNTVHAMEALRRAKYKFPGRQKVIVSNKWGFTRFTHEEYKELKDAGKLIPDGCYVKLTPTKGNLAA 208          
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A1R1PFQ5 (60S ribosomal protein L10 n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PFQ5_ZANCU)

HSP 1 Score: 315 bits (808), Expect = 1.890e-106
Identity = 153/209 (73.21%), Postives = 177/209 (84.69%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPIQAF 253
            MGRRPARCYRYCKNKPYPKS  XXXXX   IRIFDLGRK+AGVDEFP   H++SDE +Q+SSEALEAAR+ CNKY+TK  GK++FHLRVR HPFHVLRINKMLSCAGADRLQTGMRGAFGKP GTVARVKIGQ LLS+RT++NNK   +EALRRAKYKFPGRQKL IS KWGFTK S+E+Y+E +  G++ PDG + K    +GP++ +
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFXXXXXDPKIRIFDLGRKKAGVDEFPLCVHMISDELQQISSEALEAARICCNKYITKVAGKDSFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPYGTVARVKIGQILLSVRTRDNNKDVVMEALRRAKYKFPGRQKLIISKKWGFTKLSREDYIEARSAGKLQPDGCHVKYLDERGPLENY 209          
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A1R1YE63 (60S ribosomal protein L10 n=3 Tax=Smittium TaxID=4888 RepID=A0A1R1YE63_9FUNG)

HSP 1 Score: 314 bits (804), Expect = 7.690e-106
Identity = 152/207 (73.43%), Postives = 174/207 (84.06%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPIQ 251
            MGRRPARCYRYCKNKPYPKS  XXXXX   IRIFDLGRK+A VDEFP   H+ SDE +Q+SSEALEAAR+ CNKY+TK+ GK++FHLR+R HPFHVLRINKMLSCAGADRLQTGMRGAFGKP GT ARVKIGQ LLS+RTK++NKA  +EALRRAKYKFPGRQK+ IS KWGFTK S+EEY   + +G++IPDG Y K     GP++
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFXXXXXDPKIRIFDLGRKKANVDEFPLCIHMTSDEYQQISSEALEAARICCNKYITKTSGKDSFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPYGTAARVKIGQILLSVRTKDSNKATVMEALRRAKYKFPGRQKIIISKKWGFTKLSREEYANARVEGKVIPDGCYVKYVGEHGPLE 207          
BLAST of Ggra7560.t1 vs. uniprot
Match: L8GXX4 (Ribosomal protein L10, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GXX4_ACACA)

HSP 1 Score: 313 bits (803), Expect = 8.560e-106
Identity = 147/204 (72.06%), Postives = 172/204 (84.31%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKG 248
            MGRRPARCYRYCKNKPY KS          +RI+DLGRK+AGVDEFPF AHL+S E EQ+SSEALEAAR++CNKY+TK  GK++FH+RVR HP+H+LRINKMLSCAGADRLQTGMRGAFGKP G VARVKIGQ L S+R+K+N+KAH +EALRRAKYKFPGRQK+ +S+KWGFT   +EEY++LK +GRIIPDG   KV  NKG
Sbjct:    1 MGRRPARCYRYCKNKPYIKSRYCRGVPEPKLRIYDLGRKKAGVDEFPFVAHLLSWEHEQISSEALEAARISCNKYITKMAGKDSFHMRVRVHPYHILRINKMLSCAGADRLQTGMRGAFGKPAGCVARVKIGQILFSVRSKDNSKAHVIEALRRAKYKFPGRQKIVLSNKWGFTPLQREEYLQLKSEGRIIPDGVNAKVVKNKG 204          
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A4P9ZLQ0 (60S ribosomal protein L10-A n=2 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZLQ0_9FUNG)

HSP 1 Score: 311 bits (798), Expect = 6.290e-105
Identity = 148/209 (70.81%), Postives = 170/209 (81.34%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPIQAF 253
            MGRRPARCYRYCKNKPYPKS          IRI+DLGRK+AGVDEFP   HLVS+E EQLSSEALEAAR+  NKY+TK  GK++FHLRVR HPFHV+RINKMLSCAGADRLQTGMRGAFGKP G VARV IGQ L S+RTK++NKA  +EALRRAKYKFPGRQK+ +S KWGFTK S+E+Y+E ++ G++ PDG Y K    KGP+ AF
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIYDLGRKKAGVDEFPLCVHLVSNEYEQLSSEALEAARICANKYITKMSGKDSFHLRVRVHPFHVVRINKMLSCAGADRLQTGMRGAFGKPNGVVARVNIGQVLFSVRTKDSNKAVVIEALRRAKYKFPGRQKIILSKKWGFTKLSREDYIEARQAGQLQPDGCYVKYLNEKGPLSAF 209          
BLAST of Ggra7560.t1 vs. uniprot
Match: A7RJH6 (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RJH6_NEMVE)

HSP 1 Score: 311 bits (796), Expect = 1.220e-104
Identity = 144/209 (68.90%), Postives = 172/209 (82.30%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPIQAF 253
            MGRRPARCYRYCKNKPYPKS          IRI+DLGRK+A VD+FP   H+VSDE EQLS EA+EAAR+  NKYM KSCGK+AFH+R+R HPFHV+RINKMLSCAGADRLQTGMRGAFGKP GTVARV IGQT++S+RTK+ NKA A+EALRRAK+KFPGRQKLF+S KWGFTKF ++ Y + + +G++IPDG + K  +  GP+ A+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFNRGVPDPKIRIYDLGRKKAMVDDFPLCVHMVSDEYEQLSGEAMEAARICANKYMVKSCGKDAFHIRIRTHPFHVVRINKMLSCAGADRLQTGMRGAFGKPQGTVARVNIGQTIISIRTKDGNKAAAIEALRRAKFKFPGRQKLFVSRKWGFTKFDRDIYEQWRAEGKLIPDGVHAKYISGHGPLAAW 209          
BLAST of Ggra7560.t1 vs. uniprot
Match: A0A2B4S7M3 (60S ribosomal protein L10 n=3 Tax=Scleractinia TaxID=6125 RepID=A0A2B4S7M3_STYPI)

HSP 1 Score: 311 bits (796), Expect = 1.270e-104
Identity = 145/209 (69.38%), Postives = 170/209 (81.34%), Query Frame = 0
Query:   45 MGRRPARCYRYCKNKPYPKSXXXXXXXXXXIRIFDLGRKRAGVDEFPFAAHLVSDEKEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCAGADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAKYKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPIQAF 253
            MGRRPARCYRYCKNKPYPKS          IRI+DLGRK+A VDE P   H+VSDE EQLSSEALEAAR+ CNKYM K+CGK++FHLR+R HPFHV+RINKMLSCAGADRLQTGMRGAFGKP GTVARV IGQ ++SLRTK+ NKA A+EALRRAK+KFPGRQK+++S KWGFTKF +E Y E +  G+++PDG   K   + GP+ A+
Sbjct:    1 MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIYDLGRKKARVDELPLCIHMVSDEYEQLSSEALEAARICCNKYMVKNCGKDSFHLRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVNIGQVIMSLRTKDGNKAAAIEALRRAKFKFPGRQKIYVSKKWGFTKFDREVYEEWRASGKLVPDGVMAKYMADHGPLAAW 209          
The following BLAST results are available for this feature:
BLAST of Ggra7560.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVG41.480e-13495.2260S ribosomal protein L10 n=1 Tax=Gracilariopsis c... [more]
A0A7S2ZWG58.500e-12085.44Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A1X6PKW81.900e-11683.01Ribosomal_L16 domain-containing protein n=1 Tax=Po... [more]
A0A5J4YTG85.960e-10776.9260S ribosomal protein L10 n=1 Tax=Porphyridium pur... [more]
A0A1R1PFQ51.890e-10673.2160S ribosomal protein L10 n=1 Tax=Zancudomyces cul... [more]
A0A1R1YE637.690e-10673.4360S ribosomal protein L10 n=3 Tax=Smittium TaxID=4... [more]
L8GXX48.560e-10672.06Ribosomal protein L10, putative n=1 Tax=Acanthamoe... [more]
A0A4P9ZLQ06.290e-10570.8160S ribosomal protein L10-A n=2 Tax=Dimargaris cri... [more]
A7RJH61.220e-10468.90Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A2B4S7M31.270e-10469.3860S ribosomal protein L10 n=3 Tax=Scleractinia Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016180Ribosomal protein L10e/L16PFAMPF00252Ribosomal_L16coord: 56..209
e-value: 4.0E-37
score: 127.2
IPR016180Ribosomal protein L10e/L16CDDcd01433Ribosomal_L16_L10ecoord: 85..209
e-value: 2.12056E-41
score: 135.697
IPR001197Ribosomal protein L10eTIGRFAMTIGR00279TIGR00279coord: 45..218
e-value: 2.9E-77
score: 256.2
IPR001197Ribosomal protein L10ePANTHERPTHR1172660S RIBOSOMAL PROTEIN L10coord: 45..251
IPR036920Ribosomal protein L10e/L16 superfamilyGENE3D3.90.1170.10Ribosomal protein L10e/L16coord: 45..253
e-value: 3.6E-113
score: 378.5
IPR036920Ribosomal protein L10e/L16 superfamilySUPERFAMILY54686Ribosomal protein L16p/L10ecoord: 48..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
IPR018255Ribosomal protein L10e, conserved sitePROSITEPS01257RIBOSOMAL_L10Ecoord: 152..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:65200..66126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7560.t1Ggra7560.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 65200..66126 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7560.t1 ID=Ggra7560.t1|Name=Ggra7560.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=254bp
MVVRNAGGDHRNSSKPSPSHRAPRARFTFVEVKSLLPRPGQLSIMGRRPA
RCYRYCKNKPYPKSRYCRGVPDPKIRIFDLGRKRAGVDEFPFAAHLVSDE
KEQLSSEALEAARVACNKYMTKSCGKEAFHLRVRAHPFHVLRINKMLSCA
GADRLQTGMRGAFGKPLGTVARVKIGQTLLSLRTKENNKAHALEALRRAK
YKFPGRQKLFISSKWGFTKFSKEEYMELKEQGRIIPDGSYCKVATNKGPI
QAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016180Ribosomal_L10e/L16
IPR001197Ribosomal_L10e
IPR036920Ribosomal_L10e/L16_sf
IPR018255Ribosomal_L10e_CS