Ggra7556.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7556.t2
Unique NameGgra7556.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length153
Homology
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A2V3IVM2 (Divalent-cation tolerance protein CutA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVM2_9FLOR)

HSP 1 Score: 130 bits (327), Expect = 6.520e-36
Identity = 75/150 (50.00%), Postives = 100/150 (66.67%), Query Frame = 0
Query:    1 MRYALATGAAALLLLLLGAARTAPLASVARRLAKSARGGSGDDSEAQ-VVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQTQ 149
            MRYA+    A  L  +L  A T  L  ++  L  S+   + D++ A   VMA  TVPD A   AI++ALV+ERL ACVN V G+KST+ W+G V  + E+LLI+KTR  L+  L+ RL QLHPYDVPELIVH++VDG+APYL+W+   T+
Sbjct:    1 MRYAIFALVALALAAMLAHAATRRLLPLSTALHSSSA--ADDNAHATPYVMAFSTVPDQAVATAISNALVTERLAACVNTVPGLKSTYCWQGNVNVDDELLLIIKTRAQLIPQLKKRLVQLHPYDVPELIVHSIVDGHAPYLKWIAHSTK 148          
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A841H839 (Periplasmic divalent cation tolerance protein n=2 Tax=Longimicrobium terrae TaxID=1639882 RepID=A0A841H839_9BACT)

HSP 1 Score: 117 bits (293), Expect = 3.000e-31
Identity = 55/101 (54.46%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   48 VVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQT 148
            VV+A+ T PD  T   I  ALV ERL+AC+N V G+ S +RWEG+V  + EVL++MKTR   V  LR+R+++LHPY VPEL+V  VV+G APY +WVR +T
Sbjct:   10 VVLALSTAPDAGTAARIGQALVDERLIACMNVVPGLTSIYRWEGEVRHDSEVLMLMKTRPGRVDALRARISELHPYRVPELLVAPVVEGLAPYCRWVRDET 110          
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A154QJL9 (Cation tolerance protein n=2 Tax=Rhodanobacter TaxID=75309 RepID=A0A154QJL9_9GAMM)

HSP 1 Score: 112 bits (279), Expect = 3.850e-29
Identity = 53/103 (51.46%), Postives = 72/103 (69.90%), Query Frame = 0
Query:   46 AQVVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQT 148
            A V++  C+ PD A+  AIA ALV ERL ACVN + G+ ST+RW+G V+Q++E LL++KT       L+SRL QLHPY++PEL+   V  G+A YL WVR+ T
Sbjct:    5 ATVLLCYCSCPDAASAQAIAEALVGERLAACVNRLPGIHSTYRWQGAVSQDREELLLIKTTAERFDALKSRLLQLHPYELPELVAVPVQRGHAAYLDWVREAT 107          
BLAST of Ggra7556.t2 vs. uniprot
Match: divalent-cation tolerance protein CutA n=1 Tax=Halochromatium glycolicum TaxID=85075 RepID=UPI001909E707 (divalent-cation tolerance protein CutA n=1 Tax=Halochromatium glycolicum TaxID=85075 RepID=UPI001909E707)

HSP 1 Score: 111 bits (277), Expect = 7.730e-29
Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 0
Query:   40 SGDDSEAQVVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQT 148
            S      QV +A CT P+  T  ++A ALVSERL ACVNA+ GV S +RWE +V  + EVLLI+KT    +  + +R+  LHPYDVPE+I H +  G+  YL WVRQ T
Sbjct:    2 SNQSDSQQVYVAYCTCPNAETAQSLAEALVSERLAACVNALPGVTSVYRWESQVETDTEVLLIIKTTEPCITPMTARIASLHPYDVPEVISHPITTGHENYLDWVRQCT 110          
BLAST of Ggra7556.t2 vs. uniprot
Match: divalent-cation tolerance protein CutA n=1 Tax=Steroidobacter soli TaxID=2497877 RepID=UPI00101D1E6B (divalent-cation tolerance protein CutA n=1 Tax=Steroidobacter soli TaxID=2497877 RepID=UPI00101D1E6B)

HSP 1 Score: 110 bits (276), Expect = 1.030e-28
Identity = 55/99 (55.56%), Postives = 70/99 (70.71%), Query Frame = 0
Query:   47 QVVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVR 145
            QV++ + + PD ATG  IA ALVSERL  CVN VAGV ST+ W+G++  + E+LLI+KT  A +  L +RL  LHPY++PELIV  V  GN  YLQWVR
Sbjct:    4 QVIVGLSSCPDEATGKRIAEALVSERLATCVNRVAGVTSTYFWDGRLQDDAEILLIIKTTAARLAELEARLRVLHPYELPELIVLPVTGGNERYLQWVR 102          
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A522IVT7 (Divalent-cation tolerance protein CutA n=1 Tax=Rhodanobacter sp. TaxID=1883446 RepID=A0A522IVT7_9GAMM)

HSP 1 Score: 110 bits (275), Expect = 1.270e-28
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 0
Query:   48 VVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQT 148
            V++  CT PD A+   IA  LVSERL ACV+ ++G++ST+RWEG V  + EVLL++KT  + +  L  RL QLHPY+VPELI   VV G+  YL WVR+Q+
Sbjct:    5 VLLCYCTCPDDASARRIAETLVSERLAACVSQLSGIRSTYRWEGAVHSDAEVLLLIKTTDSRLAALERRLLQLHPYEVPELIAVPVVQGHEAYLDWVRRQS 105          
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A0D0S417 (Periplasmic divalent cation tolerance protein cutA n=3 Tax=unclassified Lysobacter TaxID=2635362 RepID=A0A0D0S417_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 1.790e-28
Identity = 52/102 (50.98%), Postives = 72/102 (70.59%), Query Frame = 0
Query:   48 VVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQTQ 149
            V++A CT PD A+ D +A ALV+ERL ACV+ + GV+ST+RW+G+V    EVLL++KT    +  L +R+  LHPY++PELI    V G APYL WV +QT+
Sbjct:    3 VLIAYCTCPDAASADVLARALVAERLAACVSEIPGVRSTYRWQGRVEHGNEVLLMIKTTREQLDALTARVRALHPYELPELIAVEAVGGLAPYLDWVVEQTR 104          
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A7S6ZSX3 (Divalent-cation tolerance protein CutA n=2 Tax=unclassified Lysobacter TaxID=2635362 RepID=A0A7S6ZSX3_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 1.790e-28
Identity = 54/102 (52.94%), Postives = 72/102 (70.59%), Query Frame = 0
Query:   48 VVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQTQ 149
            V++A CT PD A+ D +A ALV ERL ACV+ + GV+ST+RWEG+V   QEVLL++KT    + +L  R+  LHPY++PELI    V G APYL WV +QT+
Sbjct:    3 VLIAYCTCPDRASADTVADALVGERLAACVSQLPGVRSTYRWEGRVEHGQEVLLMIKTTRDQLDSLTVRVRALHPYELPELIAVEAVGGLAPYLDWVVEQTR 104          
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A562LS16 (Divalent cation tolerance protein n=1 Tax=Lysobacter ruishenii TaxID=686800 RepID=A0A562LS16_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 1.790e-28
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 0
Query:   49 VMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQTQ 149
            ++  CT PD AT D +AHA+V  RL ACVNA+ GV+ST+RW+G+V Q  EVLL++KT G  V  L  RL +LHPY++PE++      G   Y+ WV QQT+
Sbjct:    4 LLVFCTCPDAATADRLAHAVVEARLAACVNALPGVRSTYRWQGQVEQADEVLLLVKTTGDRVEALTRRLRELHPYELPEVLAVEASAGLPEYVAWVAQQTR 104          
BLAST of Ggra7556.t2 vs. uniprot
Match: A0A259R2L8 (Divalent-cation tolerance protein CutA n=1 Tax=Xanthomonadales bacterium 14-68-21 TaxID=1970612 RepID=A0A259R2L8_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 3.400e-28
Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:   48 VVMAMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVLLIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQ 147
            V++  CT PD A    +A  LV ERL ACVN + G+ ST+RW+G+V  + EVLL++KT  A   +L+ RL  LHPY++PELI   V +G+ PYL WVR Q
Sbjct:    5 VLLCYCTCPDTACAQKLADVLVGERLAACVNRIPGIASTYRWQGEVVTDSEVLLLIKTTAAQFDSLKERLLALHPYELPELIAVPVTEGHRPYLDWVRDQ 104          
The following BLAST results are available for this feature:
BLAST of Ggra7556.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVM26.520e-3650.00Divalent-cation tolerance protein CutA n=1 Tax=Gra... [more]
A0A841H8393.000e-3154.46Periplasmic divalent cation tolerance protein n=2 ... [more]
A0A154QJL93.850e-2951.46Cation tolerance protein n=2 Tax=Rhodanobacter Tax... [more]
divalent-cation tolerance protein CutA n=1 Tax=Halochromatium glycolicum TaxID=85075 RepID=UPI001909E7077.730e-2949.54divalent-cation tolerance protein CutA n=1 Tax=Hal... [more]
divalent-cation tolerance protein CutA n=1 Tax=Steroidobacter soli TaxID=2497877 RepID=UPI00101D1E6B1.030e-2855.56divalent-cation tolerance protein CutA n=1 Tax=Ste... [more]
A0A522IVT71.270e-2852.48Divalent-cation tolerance protein CutA n=1 Tax=Rho... [more]
A0A0D0S4171.790e-2850.98Periplasmic divalent cation tolerance protein cutA... [more]
A0A7S6ZSX31.790e-2852.94Divalent-cation tolerance protein CutA n=2 Tax=unc... [more]
A0A562LS161.790e-2850.50Divalent cation tolerance protein n=1 Tax=Lysobact... [more]
A0A259R2L83.400e-2850.00Divalent-cation tolerance protein CutA n=1 Tax=Xan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004323Divalent ion tolerance protein, CutAPFAMPF03091CutA1coord: 50..147
e-value: 1.7E-32
score: 111.2
IPR004323Divalent ion tolerance protein, CutAPANTHERPTHR23419DIVALENT CATION TOLERANCE CUTA-RELATEDcoord: 26..148
IPR015867Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminalGENE3D3.30.70.120coord: 45..152
e-value: 2.1E-36
score: 126.0
NoneNo IPR availablePANTHERPTHR23419:SF8FI09726Pcoord: 26..148
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR011322Nitrogen regulatory PII-like, alpha/betaSUPERFAMILY54913GlnB-likecoord: 47..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:55610..56153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7556.t2Ggra7556.t2Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 55610..56153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7556.t2 ID=Ggra7556.t2|Name=Ggra7556.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=153bp
MRYALATGAAALLLLLLGAARTAPLASVARRLAKSARGGSGDDSEAQVVM
AMCTVPDGATGDAIAHALVSERLVACVNAVAGVKSTFRWEGKVTQEQEVL
LIMKTRGALVHTLRSRLTQLHPYDVPELIVHAVVDGNAPYLQWVRQQTQH
TL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004323Ion_tolerance_CutA
IPR015867N-reg_PII/ATP_PRibTrfase_C
IPR011322N-reg_PII-like_a/b