Ggra753.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra753.t1
Unique NameGgra753.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra753.t1 vs. uniprot
Match: A0A2V3IPM6 (Vacuolar protein-sorting-associated protein 33-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPM6_9FLOR)

HSP 1 Score: 303 bits (776), Expect = 2.170e-101
Identity = 154/174 (88.51%), Postives = 162/174 (93.10%), Query Frame = 0
Query:    1 MPLLANLERAGLLVRSLREPPKSNLGWIFPNFGGGHTERYIPSETGSTTGSVRSFTTSASDELWRSRSRSAEYSWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHATLEHRREEIHRDEDGIDAVIVFVGGITRAE 174
            MPLLANLERAG LVRSLREPP++NLGWIFP+FGGGH ERYIPSETGSTTGSVRSFTT+ASDE  RSRSRSA+ SWQF RRALQL+TE DQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGL EEGWGSLPHIL HMSLL P HATLEHRREEI R+EDGIDAVIVFVGGITRA+
Sbjct:   66 MPLLANLERAGRLVRSLREPPRNNLGWIFPSFGGGHMERYIPSETGSTTGSVRSFTTTASDESRRSRSRSAKSSWQFVRRALQLVTERDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLCEEGWGSLPHILCHMSLLFPEHATLEHRREEICREEDGIDAVIVFVGGITRAK 239          
BLAST of Ggra753.t1 vs. uniprot
Match: A0A5J4YME3 (Vacuolar protein-sorting-associated protein 33-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YME3_PORPP)

HSP 1 Score: 79.0 bits (193), Expect = 1.920e-13
Identity = 60/175 (34.29%), Postives = 83/175 (47.43%), Query Frame = 0
Query:   73 YSWQFARRALQLITE-------------LDQDRPANP-------GTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHATLEHRREEIHRDEDGIDA--------------------VIVFVGGITRAEATAVRMASKAS-GMKALIATTAVMGPDEFVLSL 206
            Y+WQ AR AL+L++E             L QDR A              VA  YSGY PL+ RLVEAGL  +GW  LPH+ S   LLP GH    H + E    +  + +                    V+ FVGG+ RAEA+ +R  S +S   + +IAT+A++  + F+  L
Sbjct:  712 YNWQVARAALKLLSEYEPPDSVSMGSAELHQDRVAGKVIVSSAAEAEQKVAGCYSGYIPLTFRLVEAGLSAQGWNKLPHLASEQ-LLPRGHTMHTHEQSE-QLQQSSVPSELLPPQQTEHEKSSRAPDIWVVAFVGGVCRAEASTIRWHSASSPSTQVIIATSAIITGNTFLHEL 884          
BLAST of Ggra753.t1 vs. uniprot
Match: M2X786 (Vacuolar protein sorting protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X786_GALSU)

HSP 1 Score: 65.1 bits (157), Expect = 1.000e-8
Identity = 44/143 (30.77%), Postives = 74/143 (51.75%), Query Frame = 0
Query:   74 SWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHATLE----HRREEIHRDEDG----IDAVIVFVGGITRAEATAVRMASKASGMKALIATTAVMGPDEFVLSLDD 208
            +W   R AL+L+ +    +P    +    A A+SGY PLS R+++  L +  W  L   L   ++   GH+  E    H R ++  +        DAV+V +GGITRAEA A++  + +SG + +I +T V   + ++ S+ D
Sbjct:  526 TWTVCRTALRLLVDY---QPKESISDIEEAEAFSGYIPLSARVIQGALDDNAWKKLLSTLC--TVFKNGHSAFEEDILHERYQVSIEMKNRKPLFDAVVVMIGGITRAEAAAMKALAYSSGKRIVIVSTTVFNGNGWIESMVD 663          
BLAST of Ggra753.t1 vs. uniprot
Match: A0A7J6VS47 (Vacuolar protein-sorting-associated protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6VS47_THATH)

HSP 1 Score: 63.5 bits (153), Expect = 2.590e-8
Identity = 48/163 (29.45%), Postives = 78/163 (47.85%), Query Frame = 0
Query:   67 RSRSAEYSWQFARRALQLITE-LDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHATLEHRREEIHRDEDGIDA----------------VIVFVGGITRAEATAVRMASKASGMKA--LIATTAVMGPDEFVLSLDDAL 210
            + + ++ +WQ  +R LQL+ E  D D P++  T   ++  +SGY PLS+RLV+  +   GW  +  IL    LLP  H   +  R   +   D +                  ++VF+GG+T AE +A+R  S   GM    ++ TT ++  D  V S  + L
Sbjct:  214 KKQDSKSNWQTIKRTLQLVLEDTDADNPSDSPTD--ISYVFSGYAPLSIRLVQHAV-RSGWRPIEDILK---LLPGPHMESKRSRYSSNPSTDSLAGTPTNLDKAADGRRSLVLVVFIGGVTFAEISALRFLSSQEGMPCDLIVGTTKLLNGDTLVQSFGENL 370          
BLAST of Ggra753.t1 vs. uniprot
Match: A0A2P6SJ85 (Putative sec1-like protein n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6SJ85_ROSCH)

HSP 1 Score: 62.4 bits (150), Expect = 8.050e-8
Identity = 53/164 (32.32%), Postives = 82/164 (50.00%), Query Frame = 0
Query:   67 RSRSAEYSWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHA--------------TLEHRREEIHRDEDGIDAVI--VFVGGITRAEATAVRMASKASGMK--ALIATTAVMG----PDEFVLSLDD 208
            + +  + +W   +RALQL+ E D D  ANP     +A A+SGY PLS+RLV+  +   GW  +  IL    LLP  H+              TL+     + +  DG  +++  VF+GG+T AE +A+R  S   GM    ++ TT ++      + FV  +DD
Sbjct:  443 KKQETKTNWLTVKRALQLVVE-DTDT-ANPND---IAYAFSGYAPLSIRLVQHAV-RSGWRPIEEILK---LLPGPHSETKRGRFSSSASFDTLQGAANNVDKVADGRRSLVLVVFIGGVTFAEISALRFLSSQEGMAYDLIVGTTKIVSGHSLTETFVGKMDD 597          
BLAST of Ggra753.t1 vs. uniprot
Match: A0A5A7R1L5 (Vacuolar protein sorting n=2 Tax=Orobanchaceae TaxID=91896 RepID=A0A5A7R1L5_STRAF)

HSP 1 Score: 62.0 bits (149), Expect = 1.060e-7
Identity = 52/162 (32.10%), Postives = 80/162 (49.38%), Query Frame = 0
Query:   67 RSRSAEYSWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLP--------------PGHATLEHRREEIHRDEDGIDAVI--VFVGGITRAEATAVRMASKASGM--KALIATTAVMGPDEFVLSLDDAL 210
            R + ++ +W   +RALQL+ E D D  ANP     ++  +SGY PLSVRLV+  +   GW  +  IL    LLP              P + TL      + +  DG  A++  +F+GG+T AE +A+R  S   GM  + +I TT ++     + +  D L
Sbjct:  402 RKQDSKSNWLTIKRALQLLVE-DTDT-ANPKD---ISYVFSGYAPLSVRLVQQAI-RSGWRPVEEILR---LLPGPHSEIKRGGFSSIPSYDTLPGSLNSLEKHADGRRALVLVIFIGGVTFAEISALRFLSSQEGMAYELIIGTTKIVNGQSLIETFVDRL 554          
BLAST of Ggra753.t1 vs. uniprot
Match: A0A059BHG4 (Uncharacterized protein n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059BHG4_EUCGR)

HSP 1 Score: 62.0 bits (149), Expect = 1.090e-7
Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 0
Query:   67 RSRSAEYSWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHATLEHRREEIHRDEDGID--------------AVIVFVGGITRAEATAVRMASKASGM 187
            + + ++ +W   +RALQL+  +D    ANP     +A  +SGY PLS+RLV+  +   GW  +  IL    +LP  H+ L+  R    +  D +                ++VFVGG+T AE +A+R  S   GM
Sbjct:  443 KKQESKSNWLTIKRALQLV--VDDTDTANPND---IAYVFSGYAPLSIRLVQNAI-RSGWRPIEEILR---MLPGPHSELKRSRFASSQSNDSLQDASVDKVTGGRRSLVLVVFVGGVTFAEISALRFLSSQEGM 568          
BLAST of Ggra753.t1 vs. uniprot
Match: A0A0K9P7I6 (Putative Vacuolar protein sorting n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P7I6_ZOSMR)

HSP 1 Score: 61.6 bits (148), Expect = 1.470e-7
Identity = 52/157 (33.12%), Postives = 77/157 (49.04%), Query Frame = 0
Query:   67 RSRSAEYSWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPP-----GHATLEHRRE---EIHRDEDGIDAV--IVFVGGITRAEATAVRMASKASGM--KALIATTAVMGPDEFVLSLDDALV 211
            + +  + +W    RAL+LI   D     NP     +A  YSGY PLS+RLV+  +   GW S+  +L    LLP      G +T    R     + R  DG  +V  +VF+GG+T  E +A+R  S   GM    ++ATT V+  +  + +L D  V
Sbjct:  442 KKQELKSNWPIITRALKLIA--DDSSSTNPND---IAHLYSGYAPLSIRLVQHAI-RSGWRSIEEVLK---LLPGPMKRGGDSTTSDMRNVHANLGRPSDGRRSVALVVFIGGVTSGELSALRFLSSQEGMGHDFIVATTKVVNGNTLLETLLDTTV 589          
BLAST of Ggra753.t1 vs. uniprot
Match: W1NPD1 (Uncharacterized protein n=7 Tax=Amborella trichopoda TaxID=13333 RepID=W1NPD1_AMBTC)

HSP 1 Score: 61.6 bits (148), Expect = 1.470e-7
Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 0
Query:   67 RSRSAEYSWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILS-----HMSLLPPGH---ATLEHRREEIHRDEDGIDA-----VIVFVGGITRAEATAVRMASKASGMK--ALIATT 194
            + + ++ +W   +RA+QL+  +D    ANP     +A  +SGY PLS+RLV+  +   GW ++  I+      HM L   G+   + LE ++E +   +  +D      ++VF+GG+T AE +A+R  S   GM    +IATT
Sbjct:  443 KKQESKSNWLTVKRAMQLV--VDDTDTANPND---IAYVFSGYAPLSIRLVQHAI-RSGWRAIEDIVKLLPGPHMELKREGYPNSSVLETQQEGLANLDKLVDGRRSLVLVVFIGGVTFAEISALRFLSSQEGMAYDIIIATT 579          
BLAST of Ggra753.t1 vs. uniprot
Match: A0A803NWG7 (Uncharacterized protein n=6 Tax=Rosales TaxID=3744 RepID=A0A803NWG7_CANSA)

HSP 1 Score: 61.2 bits (147), Expect = 1.990e-7
Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 0
Query:   67 RSRSAEYSWQFARRALQLITELDQDRPANPGTRAAVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHATLEHRREEIHRDEDGIDA----------------VIVFVGGITRAEATAVRMASKASGM 187
            + + A+ +WQ  +RALQL+ E D D  ANP     +A  +SGY PLS+RLV+  +   GW  +  IL    LLP  H+  +  R       D +                  ++VF+GG+T AE +A+R  S   GM
Sbjct:  443 KKQEAKSNWQTIKRALQLVVE-DTDT-ANPND---IAYVFSGYAPLSIRLVQHAV-RSGWRPIDEILK---LLPGPHSEAKRGRFSGSSSFDNLQGASASTDKVADGRRSLVLVVFIGGVTFAEISALRFLSSQEGM 570          
The following BLAST results are available for this feature:
BLAST of Ggra753.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPM62.170e-10188.51Vacuolar protein-sorting-associated protein 33-lik... [more]
A0A5J4YME31.920e-1334.29Vacuolar protein-sorting-associated protein 33-lik... [more]
M2X7861.000e-830.77Vacuolar protein sorting protein n=1 Tax=Galdieria... [more]
A0A7J6VS472.590e-829.45Vacuolar protein-sorting-associated protein n=1 Ta... [more]
A0A2P6SJ858.050e-832.32Putative sec1-like protein n=2 Tax=Rosoideae TaxID... [more]
A0A5A7R1L51.060e-732.10Vacuolar protein sorting n=2 Tax=Orobanchaceae Tax... [more]
A0A059BHG41.090e-731.85Uncharacterized protein n=5 Tax=Myrtoideae TaxID=1... [more]
A0A0K9P7I61.470e-733.12Putative Vacuolar protein sorting n=1 Tax=Zostera ... [more]
W1NPD11.470e-732.17Uncharacterized protein n=7 Tax=Amborella trichopo... [more]
A0A803NWG71.990e-733.58Uncharacterized protein n=6 Tax=Rosales TaxID=3744... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 69..203
e-value: 2.0E-12
score: 47.2
IPR001619Sec1-like proteinPANTHERPTHR11679VESICLE PROTEIN SORTING-ASSOCIATEDcoord: 72..203
IPR027482Sec1-like, domain 2GENE3D3.40.50.1910coord: 67..210
e-value: 3.1E-20
score: 74.6
IPR027121Vacuolar protein sorting-associated protein 33PANTHERPTHR11679:SF1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33Acoord: 72..203
IPR036045Sec1-like superfamilySUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 6..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:216597..217241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra753.t1Ggra753.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 216597..217241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra753.t1 ID=Ggra753.t1|Name=Ggra753.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MPLLANLERAGLLVRSLREPPKSNLGWIFPNFGGGHTERYIPSETGSTTG
SVRSFTTSASDELWRSRSRSAEYSWQFARRALQLITELDQDRPANPGTRA
AVAAAYSGYTPLSVRLVEAGLGEEGWGSLPHILSHMSLLPPGHATLEHRR
EEIHRDEDGIDAVIVFVGGITRAEATAVRMASKASGMKALIATTAVMGPD
EFVLSLDDALVAVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001619Sec1-like
IPR027482Sec1-like_dom2
IPR027121VPS33
IPR036045Sec1-like_sf