Ggra7527.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7527.t1
Unique NameGgra7527.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length307
Homology
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A812SP67 (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SP67_9DINO)

HSP 1 Score: 107 bits (268), Expect = 3.980e-23
Identity = 56/142 (39.44%), Postives = 86/142 (60.56%), Query Frame = 0
Query:    3 TRFLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSG 144
            T FL +GNPG+GKST+LN  IG   F SG+S   G+     + +     F+D+PGL+D++ R  A++ I + L   G +KIFFV+   N R+RPED+ T+N+VL A          H +I++NQ+ + E + L++D +  SG
Sbjct:   52 TNFLFVGNPGTGKSTILNGLIGELTFQSGISYGEGMTYRFDQVKHGKHTFMDTPGLSDMKRREAAAEAITEALKQDGRYKIFFVITLQNGRVRPEDVTTMNLVLDAAPIT------HYAIIINQMPQREFEELKSDTSPASG 187          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A2V3J358 (G domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J358_9FLOR)

HSP 1 Score: 99.8 bits (247), Expect = 6.220e-21
Identity = 66/223 (29.60%), Postives = 113/223 (50.67%), Query Frame = 0
Query:    6 LAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSGDFFKNSGCKFDITHHLLVPMDMHAVGEAGAVLENRQSILF-FLLTAPALQLW-GEEIEIPTDEYEAYEQMSRARIKDLEAIVRE 226
            +  GNPGSGKS++LN+ IG  +F SG+S+ SG+       +  + L+ D+PGL D   R RA+K I       G  K+ FV   +  RLR  D+AT+ I+++A+ S G +  K  SI++N+     ++ L+N       +   NS        ++  P   +A G+   ++    ++   FL TAPA  +   +   I  + +E   Q  +  +++LE  ++E
Sbjct:    8 IVAGNPGSGKSSILNSIIGRVKFESGISLGSGLTTALDSKRIGNVLYSDTPGLDDARIRDRAAKEISYAFRRGGKIKLIFVSTLEAGRLRSTDLATMRIIVEAIQSVGVDPAKQFSIIINKCEPEVLELLENKKNRAMLEVPLNSAAPAGRIAYM--PYRDYAAGKHNVLVTTDSNVYKEFLRTAPAFDMSRNKSFAINANGFELTVQRLQEMVEELEKKLKE 228          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A0L0T1Q2 (G domain-containing protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T1Q2_ALLM3)

HSP 1 Score: 102 bits (255), Expect = 9.230e-21
Identity = 75/250 (30.00%), Postives = 128/250 (51.20%), Query Frame = 0
Query:    6 LAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKT-EFQCSSALFLDSPGLADVEHRTRASKMIGKHLC-VPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSGDFFKNSGCK-----FDITHHLLVPMDMHAVGEAGAVL--ENRQSILFFLLTAPALQLWGEEIE-IPTDEYE--------AYEQMSRARIKDLEAIVREQEKLVSERTET 237
            +AIGNPGSGKSTL+N A  +    +G S   GI  +K  +F+ +   ++D+PGL+DV++RTRA+  I   L    G++++ FV+ T++ R++P+D+AT+ IVL A+  K    N    +++N++ E  ++ +     L   +F+    C      +   H  L P D  A      ++       +L F+ T P + +   ++E I T +++          E M  A  K LE IV   E  +++  ET
Sbjct:  222 MAIGNPGSGKSTLINGAAQSIVTQAGSSAGHGIQHDKLLKFEINGTTWIDTPGLSDVKYRTRAAGQITDALKDQEGLYRLIFVVTTESGRVKPDDLATLTIVLNAIRKK----NVPYGVIINKISERLLQKM-----LTEAEFYDKLICSLNSGPYSTNHIFLAPEDQDARDADNCIIPASAMTPVLNFIETVPCIAIRPTDVEAIKTSDFDDQEAKLKDLVEMMITAHSKQLEQIVIMHESAMAQHRET 462          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A812IHF0 (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812IHF0_9DINO)

HSP 1 Score: 100 bits (248), Expect = 1.040e-20
Identity = 80/237 (33.76%), Postives = 116/237 (48.95%), Query Frame = 0
Query:    3 TRFLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSGDFFKNSGCKFDITHHLL--VPMD-----MHAVGEAG--AVLENRQSIL------FFLLTAPALQLWGEEI-EIPTDEYEAYEQMSRARIKDLEAI 223
            T FL IGNPG+GKST+LN  I    F SG+S   G+  E    +     FLD+PGL+D   R +A++ I + L   G +KIFFV+   N R+R ED+ T+ +VL A  S  Y       +++NQL   E +AL +DP    G+  K+      +   LL  +P+D     +H V      A ++N    L      F L T P + +   E+ +I   EYEA        + D E +
Sbjct:   53 TNFLMIGNPGTGKSTVLNGLIQKPYFKSGMSFGGGMTYEFDRAEIGKHTFLDTPGLSDPTRRKQAAEAITEALKQNGYYKIFFVITLQNGRVRSEDVTTMKLVLDASPSNKY------GVIINQLNSREYEAL-HDP---EGEARKS------VLTALLGTMPVDKLSPYIHLVQHDDDLAGVDNMAKPLPDDLRDFILKTCPGIDIAEVEVADIKASEYEALTSQMEEMLADSEKL 273          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A813CEX5 (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813CEX5_9DINO)

HSP 1 Score: 96.3 bits (238), Expect = 8.730e-20
Identity = 73/238 (30.67%), Postives = 115/238 (48.32%), Query Frame = 0
Query:    1 MATRFLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEV----NKHVSIVLNQLYEHEIKALQNDPTLKSGDFFKNSGCKFDITHHLLVPMDMHAVGEAGAVLENRQSILFFLLTAPALQLWGEEI-EIPTDEYEAYEQMSRARIKDLEAIVREQEKLVSE 233
            M   FL +GNPG GKST+LN  I   +F SG S   G+       +     ++D+PGLADVE R  A+K I K L   G ++IFFVL  ++ R+RP+D AT+ +VLQA    G++     NK     + +  E+  +A  +   +     F  +       H+ L   D+        V   +  ++ F+   PA+ +   ++ EI  D+YE   QM  A  K +  +  +   L++E
Sbjct:    1 MPEYFLFVGNPGVGKSTILNGLISELRFKSGFSPGQGMTSVLQCEEKGGKFYMDTPGLADVEKRRIAAKEIEKALKQDGDYRIFFVLTLESGRVRPQDKATMELVLQAAPCIGHKYGILFNKVSKRAVAEFLENPSRADPSPRDVLLTHLFSGNLPVTTAIHYNLKDDDLE--DAMNVVKPLKPELVRFIQGLPAIHIHSSQVREIKADQYE---QMMEAMEKKMAKMQEDNAALLAE 233          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A225X2A9 (G domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2A9_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 4.640e-19
Identity = 59/197 (29.95%), Postives = 105/197 (53.30%), Query Frame = 0
Query:    6 LAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHV-SIVLNQLYEHEIKALQNDPTLKSGDFFKNSGCKFDITHHLLVPMDMHAVGEAGAVLENRQSILFFLLT-APALQLWGEEIE 200
            L +GNPG+GKSTL+N  +G   F SG+S   G+  E    Q +   ++D+PGLAD    T+A++ I   L   G++K+FF+++ +N R+  EDI T+  VL ++   G   N+ + S+V+N + + + + L+N            +  K+  T   L+P       E+G V++    I +F+   AP +++    ++
Sbjct:   10 LFLGNPGTGKSTLINCLVGKQAFRSGVSWGGGLTQEYQRIQHNDIAYMDTPGLADQTIITKAAEAITTALRQHGVYKLFFMVRINNGRVVSEDITTIERVLDSIDFHG---NRALYSVVINNISKKQFEKLKNRGYEFEQVTSVINSRKYPATAFCLIPKIDELDEESGKVVQLPHEIRYFIENEAPTIRIEANNVK 203          
BLAST of Ggra7527.t1 vs. uniprot
Match: W2QQB0 (G domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QQB0_PHYPN)

HSP 1 Score: 91.7 bits (226), Expect = 6.580e-18
Identity = 53/149 (35.57%), Postives = 89/149 (59.73%), Query Frame = 0
Query:    1 MATRFLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSG-DFFK 148
            M   +L +GNPG+GKSTL+N  IG+ +F SGLS  SG+     +F     +++D+PGLAD E + +A+  I + L   G +K+FF+++ +N R+  +D+AT+  V+ ++  +        SIV+N      +K  Q++  +K G +FFK
Sbjct:    1 MKENYLFLGNPGTGKSTLINCLIGHQEFESGLSYGSGMTHFFQKFSDHDKVYMDTPGLADREIKQQAATAITQALRQSGRYKLFFMVRLENGRVVSDDLATIETVMDSMDMEDVPF----SIVINN-----VKKRQHNAMMKRGVEFFK 140          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A8J5M4U4 (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M4U4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.680e-17
Identity = 76/250 (30.40%), Postives = 127/250 (50.80%), Query Frame = 0
Query:    1 MATRFLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSG-DFFK----NSGCKFDITHHLLVP-------MDMHAVGEAGAVLENRQSILFFLLTAPALQLWGEEI-EIPTDEYEAY-----EQMSRARIKDLEAIVREQEKLVS 232
            M   +L +GNPG+GKSTL+N  IG  +F SGLS  +G+     +      +++D+PGLAD E + +A+  I + L   G +K+FF+++ +N R+  ED+AT+  V+ ++  +    +   SIV+N      +K  Q +  +K G +FFK     +  K+       +P       MD       G V+E      FF + AP++ +  E + EI   +Y        E++ + R +D EA+ R  E L+S
Sbjct:    1 MKENYLFLGNPGTGKSTLINCLIGQQEFESGLSYGAGMTQLFQKSTHQDIVYMDTPGLADREIKQQAAAAITQALRQSGRYKLFFMVRLENGRVVSEDLATIETVMDSIDME----DAPFSIVINN-----VKKRQYETMMKKGSEFFKVVTLTNSSKYTTPCITFIPTLERLDEMDNQCTELPGDVVE------FFRVKAPSIVIAPERVNEIKLTDYNTLVNNLREELEQLR-RDNEALRRRVEDLMS 234          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A225X3J8 (G domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3J8_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 3.870e-17
Identity = 59/213 (27.70%), Postives = 113/213 (53.05%), Query Frame = 0
Query:    3 TRFLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSGDFFK------NSGCKFDITHHLLVPM--DMHAVGEAGAVLENRQSILFFLLTAPALQLWGEEI-EIPTDEY 206
            T +L +GNPG+GKSTLLN  +G   F +G+S  SG      +++    +++D+PGL+D   + RA   I + L   G +K+FF+++ +N R+  +D+A + +++ ++  +        +I++N + + E KA+     ++ GD +       N+G K+   H L +P   D+     A   L N   + FF   AP++ +  + + ++  DE+
Sbjct:    4 TYYLFLGNPGTGKSTLLNCIVGEQVFTAGISYESGFTEVVEKYEHKGNVYMDTPGLSDRTLKQRAIAAIIEALRQSGTYKLFFIVRIENGRVVADDLAIIEMMISSIDQRDVPF----TIIVNNIRKREYKAI-----MERGDEYMQFVTLINAG-KYCTPHILFIPTLPDLDKKDNALVTLPNF-VMNFFHFEAPSVVIESDHVNDVTQDEF 205          
BLAST of Ggra7527.t1 vs. uniprot
Match: A0A833WFT4 (50S ribosome-binding GTPase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WFT4_PHYIN)

HSP 1 Score: 89.7 bits (221), Expect = 4.050e-17
Identity = 60/202 (29.70%), Postives = 108/202 (53.47%), Query Frame = 0
Query:    5 FLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSALFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIATVNIVLQALTSKGYEVNKHV--SIVLNQLYEHEIKALQNDPTLKSGDFFK------NSGCKFDITHHLLVPMDMHAVGEAGAVLENRQSIL-FFLLTAPALQLWGE 197
            +L +GNPG+GKSTLLN  IG   F +G+    G+     + +    +F+D+PGLAD +   +A+  I + L   G +K+FF+++ +N R+  +D++T+  V+  +     E  + V  ++++N + + + KA+     ++ GD FK      N+G K+  +H L VP   +   E  AV+     +  F  L+AP + +  E
Sbjct:    6 YLLLGNPGTGKSTLLNCIIGEQVFEAGICYGGGLTEFFRKHEHDGDVFMDTPGLADRKLMKKAAAAITEALRQSGAYKLFFMVRLENGRVVADDLSTIETVMSCI-----EATEDVPFTVIINNIKKRQYKAM-----MERGDAFKEVVTLVNAG-KYTTSHILFVPTLDNLDEEDNAVVTLPDHVTRFIFLSAPTVVIKPE 196          
The following BLAST results are available for this feature:
BLAST of Ggra7527.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812SP673.980e-2339.44Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A2V3J3586.220e-2129.60G domain-containing protein n=1 Tax=Gracilariopsis... [more]
A0A0L0T1Q29.230e-2130.00G domain-containing protein n=1 Tax=Allomyces macr... [more]
A0A812IHF01.040e-2033.76Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A813CEX58.730e-2030.67Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A225X2A94.640e-1929.95G domain-containing protein n=1 Tax=Phytophthora m... [more]
W2QQB06.580e-1835.57G domain-containing protein n=9 Tax=Phytophthora T... [more]
A0A8J5M4U41.680e-1730.40Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A225X3J83.870e-1727.70G domain-containing protein n=1 Tax=Phytophthora m... [more]
A0A833WFT44.050e-1729.7050S ribosome-binding GTPase n=1 Tax=Phytophthora i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..160
e-value: 3.2E-11
score: 45.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..283

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:286002..286922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7527.t1Ggra7527.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 286002..286922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7527.t1 ID=Ggra7527.t1|Name=Ggra7527.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=307bp
MATRFLAIGNPGSGKSTLLNTAIGNFQFVSGLSIASGIIPEKTEFQCSSA
LFLDSPGLADVEHRTRASKMIGKHLCVPGIFKIFFVLKTDNLRLRPEDIA
TVNIVLQALTSKGYEVNKHVSIVLNQLYEHEIKALQNDPTLKSGDFFKNS
GCKFDITHHLLVPMDMHAVGEAGAVLENRQSILFFLLTAPALQLWGEEIE
IPTDEYEAYEQMSRARIKDLEAIVREQEKLVSERTETHQEYVKMKEQNES
MFSASKNGQSDHQKKHVSRTGTFVQSMQKRMIPSTSRAEGDRREKPGNAL
QHSSNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase