Ggra7524.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7524.t1
Unique NameGgra7524.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length619
Homology
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BLAST of Ggra7524.t1 vs. uniprot
Match: A0A2V3IQ57 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ57_9FLOR)

HSP 1 Score: 842 bits (2175), Expect = 3.150e-302
Identity = 403/600 (67.17%), Postives = 469/600 (78.17%), Query Frame = 0 
Query:   21 NAQAIPDVPWSDDAAFVYDFLISDEFNGRRLDLSKWDPHGKRNPDTGCPNWNGPPSSSQPEWSTFFPTTTEPGTGRRAEKFYKVRKGKLTLRTDSKPVEYFKQREYYCDATTFKCNHNDQIECHATDYNGVPFYKDAAKTQFAGVTHDKCKIEPYCIPHPEFVTGRPRVYSRLVGAHITSKRSFKYGFYEVEVQMGDSPAVAAAWMHDDQMVNGFCRFVKQTDANSDRDRQLECPSKIRSRRWQEIDMLEAMNSVIHQQLYIPNIHAFAGYKGEFTSETAVDNGDGEMGGGPILAKQSLFNENNPSFSDVQAGERLANDWHFSSGSVHTLDAPWKSGRRRLGLYWSPKEIRLYVDGKEVERLRNTIIHQPMLFDFSYSFNVQWAQQTPTDAQIQEPFEVMYVRRWDVFTPDGLDPPSTLPFNEKMTEFQNHYGEQLLGMFDRFPANDDNTFSEVLPEADSLENIQETIEKVRGSLAKKFKFPSRQLWSSGDDVLRMGEQDYLMSASVMNETVYTVRQGQHALRAGGVGNRRFSRVRKKLSAVQRRIALSYRTRFSAVTN--GRAALLADGETTVFEFANPQKNGAGWATADGGGTDGSLS 618
             A   P+VPW   A F YD ++SDEF+ R LD SKWDPHGKRNPDT CPNWNGPPS+SQPEWSTFFPTTT+P T    EK Y VR GKLTL    +P+EYF +REYYC+ TTFKCNH++ I+C AT+YNGVPFYKDAAKT +AGVTHDKCKIEP+CIPHPE+VTG+PRVYSR+VGAH+TSK  FKYGF+EV VQ+G+SP+VAA WMHDDQMVNG+CRF+  TD +   DR LECPS IRSRRWQEIDMLEAMNS  H+QLYIPNIHAFAGYKGEFTSE A D+GDG MGGGPIL K SLFNE  PSF DV A +R +NDWHFSSGSVH L+A W    R+LG+YWSPKEIR YVDGKEV R+RNT+IHQPML D SYSFNVQWA++T T  +I+EPF + YVRRWDV+T DGLDPPS+LPF+EKMT F NHYGE LLGMF+RFP NDD TFSEVLPE D+L                    PS ++  +G     +G+ DY++S   +N +V++VRQG+   RAGGVGNRRFS+ R+KLSA +R +ALSY +RF+ V     RA ++ D ETTVFEFANP  NGAGWAT DG GTDGSLS
Sbjct:   20 TAAIRPNVPWRSSATFKYDRVVSDEFSLRVLDTSKWDPHGKRNPDTNCPNWNGPPSTSQPEWSTFFPTTTDPDTLLPTEKLYSVRNGKLTLYNGVRPLEYFTKREYYCNTTTFKCNHDNTIDCFATNYNGVPFYKDAAKTMYAGVTHDKCKIEPFCIPHPEYVTGKPRVYSRIVGAHLTSKTPFKYGFFEVAVQIGNSPSVAAVWMHDDQMVNGYCRFITNTDPSRSGDRVLECPSLIRSRRWQEIDMLEAMNSAFHKQLYIPNIHAFAGYKGEFTSEIAQDSGDGNMGGGPILVKSSLFNEPKPSFGDVPAADRKSNDWHFSSGSVHKLNAAWSDRPRKLGMYWSPKEIRFYVDGKEVRRIRNTLIHQPMLMDLSYSFNVQWARETATTQRIEEPFHIYYVRRWDVYTDDGLDPPSSLPFDEKMTTFGNHYGEDLLGMFERFPTNDDKTFSEVLPEEDTLSG------------------PSSRM-QTGVAEFDLGDTDYMLSELQVNRSVFSVRQGRRQRRAGGVGNRRFSKARRKLSAQERLVALSYASRFAGVRRLGERAEVVPDAETTVFEFANPNANGAGWATTDGLGTDGSLS 600
The following BLAST results are available for this feature:
BLAST of Ggra7524.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ573.150e-30267.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 23..428
e-value: 1.1E-27
score: 99.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..618
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 38..426

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:273641..275497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7524.t1Ggra7524.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 273641..275497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7524.t1 ID=Ggra7524.t1|Name=Ggra7524.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=619bp
MCFRACFVIAYGLLLSASVANAQAIPDVPWSDDAAFVYDFLISDEFNGRR
LDLSKWDPHGKRNPDTGCPNWNGPPSSSQPEWSTFFPTTTEPGTGRRAEK
FYKVRKGKLTLRTDSKPVEYFKQREYYCDATTFKCNHNDQIECHATDYNG
VPFYKDAAKTQFAGVTHDKCKIEPYCIPHPEFVTGRPRVYSRLVGAHITS
KRSFKYGFYEVEVQMGDSPAVAAAWMHDDQMVNGFCRFVKQTDANSDRDR
QLECPSKIRSRRWQEIDMLEAMNSVIHQQLYIPNIHAFAGYKGEFTSETA
VDNGDGEMGGGPILAKQSLFNENNPSFSDVQAGERLANDWHFSSGSVHTL
DAPWKSGRRRLGLYWSPKEIRLYVDGKEVERLRNTIIHQPMLFDFSYSFN
VQWAQQTPTDAQIQEPFEVMYVRRWDVFTPDGLDPPSTLPFNEKMTEFQN
HYGEQLLGMFDRFPANDDNTFSEVLPEADSLENIQETIEKVRGSLAKKFK
FPSRQLWSSGDDVLRMGEQDYLMSASVMNETVYTVRQGQHALRAGGVGNR
RFSRVRKKLSAVQRRIALSYRTRFSAVTNGRAALLADGETTVFEFANPQK
NGAGWATADGGGTDGSLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf