Ggra7521.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7521.t1
Unique NameGgra7521.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length199
Homology
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A2V3IQ40 (Methylmalonic aciduria and homocystinuria type D protein, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ40_9FLOR)

HSP 1 Score: 138 bits (348), Expect = 4.800e-38
Identity = 75/173 (43.35%), Postives = 105/173 (60.69%), Query Frame = 0
Query:   26 RISAHTLVAPLLSETFVKLQYSAHVANKSLARELRTILPDAPRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVGVYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVLQQSLRALNHA 198
            R +A T++ P LS+ F  L+YS HV   S+ REL+T+ P    G  L V+ TVQ     L+++G+ QA EKDR L+RF  W   ++  +  R+  AW++A DPASG A WG   GVY EVDG +R LGY  ++VG C +  HP W    Y A++F +ARR+ L  +L  +N A
Sbjct:    8 RRAADTVLHPTLSDAFEGLEYSVHVPAASVRRELKTVFPGTDVGQIL-VVPTVQQARCSLLSWGEEQAEEKDRLLERFVRWCEAVKKAVLKRET-AWIDAVDPASGVALWGGAAGVYNEVDGFARTLGYDVQLVGSCPILEHPAWRFRSYPATLFCAARRNTLLHALAEVNGA 178          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A7S0G4N2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4N2_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 1.060e-22
Identity = 60/162 (37.04%), Postives = 87/162 (53.70%), Query Frame = 0
Query:   38 SETFVKLQYSAHVANKSLARELRTILP--DAPRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVG-VYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVLQQSLRALN 196
            S+     +YSA +  +++ RELR +    D P G  ++V+ T Q    PL  +GD +A EKDR L+RF  WA  LR +L  +    W +  DP +G    G   G +Y +VDG  RLL Y+ +   GC +  HP+W  + Y A+ FT+A R  L  SL+  N
Sbjct:   12 SQALEDFEYSALLVPRTMLRELRHVFAGIDLPDGETIAVL-TCQKASVPLTNWGDEEAAEKDRLLERFLVWAKDLRSKLEGK--GFWSDFTDPCTGLPYNGDSSGSIYPDVDGFERLLRYSVDGSMGCRIMSHPKWRFSSYPATFFTTAPRQELVDSLKLTN 170          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A4P9Y540 (Uncharacterized protein n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y540_9FUNG)

HSP 1 Score: 94.0 bits (232), Expect = 2.530e-20
Identity = 57/144 (39.58%), Postives = 75/144 (52.08%), Query Frame = 0
Query:   44 LQYSAHVANKSLARELRTILPDAPRGA---ALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGR-GVGVYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSA 183
            LQYS H   +S  R L+ I P  P G     L ++ T Q    P++++    A EKD  L  F  WA RL   L A     W +  DPASG     + G   Y +V+GA RLL YAT  +GGC +  HP+WG  VY  ++FT+A
Sbjct:   53 LQYSIHACPRSFRRTLQLIFPSLPSGPDAPTLHILPTFQPTSCPILSWTPEAAAEKDHLLLTFTTWANRLTLALHAE--GHWADLTDPASGLPVHTQQGPSFYPDVEGAERLLRYATVDIGGCRLLEHPKWGSRVYPGTLFTTA 194          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A6G0X228 (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X228_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.570e-17
Identity = 59/168 (35.12%), Postives = 84/168 (50.00%), Query Frame = 0
Query:   23 RAQRISAHTLVAPLLSETFVKLQYSAHVANKSLARELRTILPD-APRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVG-VYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVL 188
            R  R+  H ++ P  + T   L+ S H   +++ REL  + P+   + + +  +VT QH    L  FG+    EKDR L+ F  WA  L   + A     W +  DP SG          VY+EVDG   LL Y+    G C +  HP+WG AVY AS+FT+A  DV+
Sbjct:   13 RTGRVPRHVMLLPP-TMTSSGLEVSVHECPRTMMRELVHVFPNHLKKDSNVLGVVTCQHACVDLAQFGEEADKEKDRLLENFVKWAHELSAAIIAA--GHWADFIDPCSGLPMLALNSNKVYSEVDGVEVLLRYSCLSAGMCKILIHPEWGAAVYPASLFTTAPYDVV 177          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A6H5K3L9 (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L9_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.880e-17
Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 0
Query:   44 LQYSAHVANKSLARELRTILPDAPRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVGVYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVLQQSL 192
            L+ S H   ++L REL  + P     A L+ I T Q     L+  GD    EKD  L  F  +A+ L  ++R  +   W +  DP SG      G  VY+EV+G   LL Y     G C V  HPQWG AVY AS+F +A  D +Q+ L
Sbjct:   24 LEVSLHTCPRALLRELDHVFPGVDLDACLA-IPTNQKAGMDLVAMGDTVETEKDVLLNSFASFASGLCKQIR--EAGYWADYIDPCSGLPMLSGGTKVYSEVEGMQLLLQYQVMNAGNCKVLLHPQWGSAVYPASLFCTAPSDFVQRLL 169          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A067CS91 (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CS91_SAPPC)

HSP 1 Score: 81.3 bits (199), Expect = 1.010e-15
Identity = 54/147 (36.73%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   44 LQYSAHVANKSLARELRTILPDA-PRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVG-VYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVL 188
            L+ S H   ++L REL  + P    + +A+  +VT Q     L  FG     EKDR L+ F  WA  +   + A     W +  DP SG          VY+EVDG   LL Y+    G C +  HP+WG AVY AS+FT+A  DV+
Sbjct:   33 LEVSVHECPRALLRELVHVFPATLKKDSAVLGVVTCQRACVDLAQFGSEADKEKDRLLENFARWAQDVATAILAS--GHWADFIDPCSGLPMLAMNSSKVYSEVDGVEVLLHYSCLSAGMCKILLHPEWGAAVYPASLFTTAPYDVV 177          
BLAST of Ggra7521.t1 vs. uniprot
Match: W4GVX0 (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVX0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.280e-15
Identity = 52/147 (35.37%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   44 LQYSAHVANKSLARELRTILPDA-PRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVG-VYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVL 188
            L+ S H   +++ REL  + P+   +   +  +VT Q     L  FG+    EKDR L+ F  WA  + + L A     W +  DP SG          VY+EVDG   LL Y     G C +  HP+WG AVY AS+FT+A  D++
Sbjct:   64 LEVSVHECPRTMMRELVHVFPNTLKKDCNVLAVVTNQRASVDLAQFGEEADKEKDRLLENFVKWAHEVAEALTAA--GHWADFIDPCSGLPMLALNSNKVYSEVDGVEVLLRYNCLSAGMCKILIHPEWGAAVYPASLFTTAPSDLV 208          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A7S4GLS2 (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GLS2_9EUGL)

HSP 1 Score: 81.3 bits (199), Expect = 1.310e-15
Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 0
Query:   44 LQYSAHVANKSLARELRTILP-DAPRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAW-GRGVGVYAEVDGASRLLGYATEVV----GGCAVARHPQWGLAVYLASMFTSARRDVL 188
            ++YS H +++ L+ E++   P D     +L++++T Q     L+ + D  A++KD +L+ F  WA  LR++L A     W +  DPA GF    G G   +++V G    L Y    +    GGC V  HPQW LA Y A+ FT+A  + L
Sbjct:   28 IEYSVHKSSRLLSDEVKVAFPIDTFDAKSLNLVITFQPSSCELIEWTDEAAVQKDLKLEIFVKWANDLRNKLNAE--GHWADFTDPACGFPVHSGHGSQPFSDVSGCEACLPYRFHHISGSAGGCRVITHPQWRLACYPATFFTTAPEEAL 176          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A485KNW0 (Aste57867_9822 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNW0_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 2.370e-15
Identity = 58/176 (32.95%), Postives = 85/176 (48.30%), Query Frame = 0
Query:   15 QLTAAAQRRAQRISAHTLVAPLLSETFVKLQYSAHVANKSLARELRTILPDA-PRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVG-VYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVL 188
            Q TA +  R  R + H ++ P    +   L+ S H   +++ REL  + P+   + A +  ++T Q     L  FG+    EKDR L+ F  WA  +   + A     W +  DP SG          V++EVDG   LL Y     G C +  HP+WG AVY AS+FT+A  DV+
Sbjct:   17 QPTATSIARNVRPARHVMLLPPTMNSS-GLEISVHECPRTMMRELVHVFPNTLKKDANVLGVITCQRASVDLAQFGEEADKEKDRLLENFVKWAHEVAAAIAAA--GHWADFIDPCSGLPMIALNSNKVFSEVDGVEVLLRYNCLSAGMCKILIHPEWGAAVYPASLFTTAPYDVV 189          
BLAST of Ggra7521.t1 vs. uniprot
Match: A0A1V9ZA04 (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA04_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 5.070e-15
Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = 0
Query:   44 LQYSAHVANKSLARELRTILPD-APRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQLQRFFYWAARLRDELRARQPDA--WVEAADPASGFAAWGRGVG-VYAEVDGASRLLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVL 188
            L+ S H   ++L REL  + P+   + +++  +VT Q     L  FG+    EKDR L+ F  WA     E+     DA  W +  DP SG          VY+EVDG   LL Y+    G C +  HP+WG AVY AS+FT+A  +V+
Sbjct:   30 LEVSVHECPRALLRELVHVFPNNLKKDSSVLGVVTCQRACVDLAQFGEEADKEKDRLLENFAKWA----QEVATAIIDAGHWADFIDPCSGLPMLAMNSSKVYSEVDGVEVLLHYSCLSAGMCKILLHPEWGAAVYPASLFTTAPFEVV 174          
The following BLAST results are available for this feature:
BLAST of Ggra7521.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2V3IQ404.800e-3843.35Methylmalonic aciduria and homocystinuria type D p... [more]
A0A7S0G4N21.060e-2237.04Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A4P9Y5402.530e-2039.58Uncharacterized protein n=1 Tax=Piptocephalis cyli... [more]
A0A6G0X2281.570e-1735.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6H5K3L92.880e-1737.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A067CS911.010e-1536.73Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
W4GVX01.280e-1535.37Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A7S4GLS21.310e-1533.77Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A485KNW02.370e-1532.95Aste57867_9822 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1V9ZA045.070e-1536.24Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019362Methylmalonic aciduria and homocystinuria type D proteinPFAMPF10229MMADHCcoord: 38..187
e-value: 4.7E-9
score: 36.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:268280..268979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7521.t1Ggra7521.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 268280..268979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7521.t1 ID=Ggra7521.t1|Name=Ggra7521.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=199bp
MGETMSEEVSDTTTQLTAAAQRRAQRISAHTLVAPLLSETFVKLQYSAHV
ANKSLARELRTILPDAPRGAALSVIVTVQHCDTPLMTFGDAQALEKDRQL
QRFFYWAARLRDELRARQPDAWVEAADPASGFAAWGRGVGVYAEVDGASR
LLGYATEVVGGCAVARHPQWGLAVYLASMFTSARRDVLQQSLRALNHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019362MMADHC