Ggra752.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra752.t1
Unique NameGgra752.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length501
Homology
BLAST of Ggra752.t1 vs. uniprot
Match: A0A2V3IEE2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEE2_9FLOR)

HSP 1 Score: 404 bits (1037), Expect = 9.660e-135
Identity = 223/404 (55.20%), Postives = 286/404 (70.79%), Query Frame = 0
Query:   98 CQIKKVRPSAEHVVRSNDEFFVSFVGMSIASHDNETGFSAHRSDNELLLYSTKCLTRTQGLGLVPKKV--EEELARDNALAQNQLSSPSTPNEDDGGEIPPNERGGETIDVVQQTAQNARVDTGYASMFTSEDRVYIHYDPVVDARNSGTMADTFVTIPATKRIYACSEELSLSTKDVDDHHHGDEGNQQSQCVQSLFMRFTVMEIDKISDLQARAVIGVDHFGSFVSQSAGSIPYIQLLTKAFAVASSAGRHGLKSYSRPDHVLTVDKEFFLANPVRDSDVESNE-DES---KQENYLRYGYYFFLNKPVEAKLYAKTNTADENVPLMMKRTD--MKQRPGRRECEYIPLTETSYVVMKVTRGCCKLSHEDIARRSEGHKLRLDNMLSMSTAIEVLAEAERKK 493
            C++ KVRP A++VVR+ DEF +SFVGMS+ASHD  TG S H+SDNELLLYS KC T +     +P     EEE  +D      +LS  +   +D+G      E+   +     + A+  +V T + +   + D V+IHYDPV DA N+GT+ADTFV +PA+KR YACS+E+      + +H +  E + +  C++ + ++FTVMEIDKISD+QARAV+GVDH GSF+S +AGSIPYI LLTKAFAV SS G+HGLKSYSRPDHVL+ D EF LAN   D D E  E DES   K+ENYLRYGYYFFL+  V AKLY  TN  D+++PLMMKR +  + +R G+  C Y PLTE SYVVMKV+RGCC LSHE+I +RSEGHK+RL+NMLS+S A+EVLAEAERK+
Sbjct:    4 CEMDKVRPDAKNVVRNTDEFVISFVGMSVASHDAVTGLSKHKSDNELLLYSVKCATNSS----LPNATIAEEETTQDEL----ELSEKNV--DDEGKAELIREKDPSSTAKHLENAEQLKVPTTFGA---NNDSVFIHYDPVADAHNTGTLADTFVNVPASKRAYACSKEV------LREHKNNQEADDRL-CLKKIPVKFTVMEIDKISDMQARAVMGVDHVGSFMSDTAGSIPYIALLTKAFAVGSSIGKHGLKSYSRPDHVLSADVEFCLANAPSDDDNEDGENDESVRTKKENYLRYGYYFFLSHKVPAKLYTMTNAVDDSLPLMMKRAEEGLSRRRGQH-CRYFPLTEVSYVVMKVSRGCCSLSHEEIRKRSEGHKVRLENMLSISNALEVLAEAERKR 386          
BLAST of Ggra752.t1 vs. uniprot
Match: A0A2V3III8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3III8_9FLOR)

HSP 1 Score: 226 bits (577), Expect = 5.200e-65
Identity = 156/474 (32.91%), Postives = 247/474 (52.11%), Query Frame = 0
Query:   34 SVRPIVRRDALRGVINSGLRQ-QRFIGRVIHYVPGLSHRRINVEANKNCTSSSIFYVPQKK------GITPCQIKKVRPSAEHVVRSNDEFFVSFVGMSIASHDNETGFSAHRSDNELLLYSTKCLTRTQGLGLVPKKVEEELARDNALAQNQLSSPSTPNEDDGGEIPPNERGGETIDVVQQTAQNARVDTGYASMFTSEDRVYIHYDPVVDARNSGTMADTFVTIPATKRIYACSEELSLSTKDVDDHHHGDEGNQQSQCVQSLFMRFTVMEIDKISDLQARAVIGVDHFGSFVSQSAGSIPYIQLLTKAFAVASSAGRHGLKSYSRPDHVLTVDKEFFLAN---PVRDSDVESNE---DESKQENYLRYGYYFFLNKPVEAKLYAKTNTADENVPLMMKRTDMKQRPGRR-ECEYIPLTETSYVVMKVTRGCCKLSHEDIARRSEGHKLRLDNMLSMSTAIEVLAEAERKK 493
            S+  +V  + L+G  N+GLR+  RF  R          RR++VEA        +FY P +         T  Q  ++ P  +++V+  DEF +SFVGM+I+  D    F+ ++  NEL+LYS      T G      +  ++++  N+L  N  +     ++    +  P  R   +ID        +R++   ++    +D  +IHYD   D R +GT  +TFV IPA+K +Y      S   +++DD                + +RF V++IDK+SD Q  AV G+   G FV + A ++PY +L+ +AF   ++ G+ GL+ YS PDHVL VD +F LAN   P  D          + + + NYLRYGYYFFL K V+AKLY +T ++ +NVPL+++RTD   +  +R E E+ P+T  SYVVMKV+  C     E      + HK RLD +L +   +E+L + ++++
Sbjct:   10 SISILVHPNDLKGSANNGLRKGNRFSRRTCFR----RWRRVSVEAAPAMVRDRVFYAPDESHKPESTSRTATQYIRITPDVDNLVKKGDEFEISFVGMNISPQDL---FACNK--NELVLYSL-----TSGSDSAKCEWAQKISSANSLKVNMQNGFVVSDQVAPDQSQPKIRRVASID--------SRLNPALSTY--QKDVPFIHYDTEGDGRTTGTKPNTFVPIPASKAVYK-QFRRSCRRREIDD--------------DDISVRFEVLDIDKVSDEQIEAVFGITQLGDFVEKGAVALPYAELVARAFQAVAAIGKRGLRKYSAPDHVLPVDMKFRLANSHMPAGDDSKSKGTNVTEHTSRANYLRYGYYFFLEKNVDAKLYVQTRSSAQNVPLLLRRTDFDAKCAQRNELEWFPMTNVSYVVMKVSPACTSGLEEQKMALCKAHKQRLDAILQVGNILEMLEKNKKRR 444          
BLAST of Ggra752.t1 vs. uniprot
Match: A0A2V3ID24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID24_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 2.290e-50
Identity = 153/467 (32.76%), Postives = 235/467 (50.32%), Query Frame = 0
Query:   38 IVRRDALRGVINSGLRQQRFIGRVIHYVPGLSHRRINVEANKNCTSSSIFYVPQKKGITPCQ--------IKKVRPSAEHVVRSNDEFFVSFVGMSIASHDNETGFSAHRSDNELLLYSTKCLTRTQGLGLVPKKVEEELARDNALAQNQLSSPSTPNEDDGGEIP---------PNERGGET-IDVVQQTAQNARVDTGYASMFTSEDRVYIHYDPVVDARNSGTMADTFVTIPATKRIYACSEELSLSTKDVDDHHHGDEGNQQSQCVQSLFMRFTVMEIDKISDLQARAVIGVDHFGSFVSQSAGSIPYIQLLTKAFAVASSAGRHGLKSYSRPDHVLTVDKEFFLANPVRDSDVESNEDESKQE----NYLRYGYYFFLNKPVEAKLYAKTNTADENVPLMMKRTDMKQRPGR-RECEYIPLTETSYVVMKVTRGCCKLSHEDIARRSEGHKLRLDNMLSMST 481
            IV R +L+   +  LR++ +  R +   P  + RR+ VEA++  T+ SI + P++               IK  + +   VVR +D+F VSF+G+S+A  D       +  DNE+LL S   L R +      ++V E LA  +A +    S+ S     +G E            NER G   I   Q+T   + + T  A      D  ++H+DP  D  ++G+  DTF  IP TKR++      S ST         + GN     V+ + +RFTVMEIDK+++ Q  A+  ++     V ++A S+P ++ ++     A++ GR  LK  +RPDHV++ D  F LA P    +V SN+  + Q     NYLRYGYYFFL  PV+AKL+A+T+ +  NV L++K    + +     E EY PL+  SYVV+KVTRGC    ++  +     H  RL  +L   T
Sbjct:   26 IVLRKSLQSATSDSLRKRDWHERCL---PLPTRRRVFVEASEYGTADSILFAPERPNANESHQRVAATEFIKVNQNTCSDVVRHDDDFEVSFIGLSVAQQD-------YIGDNEMLLCS---LARRED----HQEVLEYLA-SSAYSTINSSNSSVDAHKNGTEEDVAVRSDVGKTNERDGVVPIPPKQKTVDLSDLPT--ALPIRPGDVTFLHFDPETDGHDTGSEPDTFTPIPGTKRLFI-QRRGSASTL-------AEGGN-----VRDVSIRFTVMEIDKLNEEQLIAIKSLEEVAKSVGKAASSVPILKFISWLLKFANTVGRSALKKVARPDHVMSSDVSFMLAEP----EVSSNDGRTIQREEYGNYLRYGYYFFLFSPVDAKLHAQTDASTHNVQLLIKHHGYRAKMANLNEKEYFPLSGVSYVVIKVTRGCSPCDNKQRSEMFARHLGRLTQLLKKYT 455          
The following BLAST results are available for this feature:
BLAST of Ggra752.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEE29.660e-13555.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3III85.200e-6532.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID242.290e-5032.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:214640..216240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra752.t1Ggra752.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 214640..216240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra752.t1 ID=Ggra752.t1|Name=Ggra752.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=501bp
MTAASTTDNNAGRRRSSLRDGKGSSRVRSSRTESVRPIVRRDALRGVINS
GLRQQRFIGRVIHYVPGLSHRRINVEANKNCTSSSIFYVPQKKGITPCQI
KKVRPSAEHVVRSNDEFFVSFVGMSIASHDNETGFSAHRSDNELLLYSTK
CLTRTQGLGLVPKKVEEELARDNALAQNQLSSPSTPNEDDGGEIPPNERG
GETIDVVQQTAQNARVDTGYASMFTSEDRVYIHYDPVVDARNSGTMADTF
VTIPATKRIYACSEELSLSTKDVDDHHHGDEGNQQSQCVQSLFMRFTVME
IDKISDLQARAVIGVDHFGSFVSQSAGSIPYIQLLTKAFAVASSAGRHGL
KSYSRPDHVLTVDKEFFLANPVRDSDVESNEDESKQENYLRYGYYFFLNK
PVEAKLYAKTNTADENVPLMMKRTDMKQRPGRRECEYIPLTETSYVVMKV
TRGCCKLSHEDIARRSEGHKLRLDNMLSMSTAIEVLAEAERKKGGLLPRL
*
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