Ggra7505.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7505.t1
Unique NameGgra7505.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length957
Homology
BLAST of Ggra7505.t1 vs. uniprot
Match: A0A2V3IR46 (Myb-like domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR46_9FLOR)

HSP 1 Score: 387 bits (994), Expect = 4.110e-116
Identity = 349/998 (34.97%), Postives = 490/998 (49.10%), Query Frame = 0
Query:   11 VHLYSWFIEPICARTSKRWNGNVRVWGLQTPSSTTWWRSSSIAIRNSSTQLTTRFGTNVVLHGTLCETYASRVHMNAVGVDMFRNGFPSQWKPSLQSSFSKASSLKWNQAPKNKLNKARANKTVSILKK----SARQQQPGKRKRVRFDVNLRPVDVPCPPSKRPRVTFVRADNQHAEQPP----SKARTRSKPPRSVF----AAAPNVATPKSPHIVPKEPYAVAVQDTNASKPVSSKAKPRARRKRNASGRAXXXXXXXXXXXXXXXXRAKSKSPASTKRSSHDGSNRSTLVAIPIANSSDILNIRRSKRIDAEPTLLNAR----KASSQPTTPTLSKKKQKRNRSNSVPPKPKRQSAPHAETPXXXXXXXXXXXXXXVKASSHDPRQAEGRRRRRRSSISEYENEPKLRERRSSPAHNTPARAETNKSKTTHLRTATVQSKLNATSDAKPLSEPRRRSRRLSEQLSVPT--TKSQTKALVESNSKNQSTHPVTQTTRRSKRILDQSSKRGPKPVESKLPKKDEVAVPSRRPKRAQKGARLTDD-------------------GSEKENSSXXXXXXXXXXXXXKRGRPRGSVKKTSLETQTSKTPPTGEQEAEQTXXXXXXXTRVRIRP-----DDTKNLPTKPTISKKRGATGSSGKEKVVGTGTNKQMKCTKKTESKACARTESKPHKASVVQFAKTNLPTLRPRRRVSFGPEFK-----SDDSVPAPQEGLTGSWSAKQREDFEKQRNSVPANDPNYWELIAAGVEGKTAAQCLELWESSWSSPPCIKRKKV-----GFADVESEPRTKKPKMSTPQVIQNVQKASKSKRGRNTAKYRTSVRRLADTFARDTEDDALEPEIVTPKMSWKLSSGRANMPNLGDGTPGTEVRQKRRNAEKGGELETPEILKRGKSFGLREADLYVSLFRRRLGAEPIVPTSKQVKPGVMRNLAKKPPLNVAKAFEPAVCEDGTSLSDAEGSQDSDSSCDGDLFF 956
            V L+SWFIEPI   +SK  + + RVWGL  P+S  WWRSSSI    S T+LTTRFGT+VVL+G LCE YA+RV M+A  ++ FR+GFPS W+  L  +F     L+   A    +   RA   V IL+K     + +     RKRVRFDV LRP+D    P KR R + V      A QP     ++   R +   + F    A+   V   KS H   +      ++  N     S K   +  R  + +  +                  K+    + K+   D     T +A+PI +S+ IL +RRSKR+   P + N      K +S P     + +  +R +  +     K   A                    V+ +  +     G +R++  S S    E    +RR  P    P +   +K+++T  R+  ++   + T+     S P  +     +Q+SV +  TK+QTKA                     KR+    +K    P +  +   DE +   RR  R + G                         GS++  SS             +R + + S  +  L + +S T    + +  +        +R+R +P     +DT ++  + +  +   +T      K+  T  +++     +  S   ++   +  +   +  A   +   R R++VSFG + +     +DD     +E     W+ +QREDFE QRN VPAN P YWE IAAGVEGK+  QCL+LW+S+W SP   K K+V     G AD   EP  KKPK+STPQ ++NVQK SK+KRGRNTAKYR +VRRLADT ARDT+DDALEPEI TP  S K++ G   +P+L DGTPGTEVRQKRRNAE+GGE  TPEILKRGKSFGLREAD YVSLFR+RLG  PIV TSK+ KPGV R++  K PLN+       V ED   LS+ + S DS  S DGDLFF
Sbjct:    9 VQLHSWFIEPIRHPSSKLHSASFRVWGLPQPASKRWWRSSSIVSAPSPTRLTTRFGTSVVLNGPLCEAYANRVKMSADCIERFRSGFPSAWRSHLSEAFV---GLR-RSARIGDIALRRA--AVPILRKPCAHGSSRDAHRVRKRVRFDVQLRPLDTSHRPQKRAR-SAVPVKGSDASQPADGHNNRRVLRPRAATNTFHNSRASNQRVRHEKSVHDASQPDLREPLKSVNDRTATSVK---KGTRSPSVASNSPVKPHGATGVTERKARTLKTNPRTTQKKRLSD-----TRIAVPIEHSAQILRVRRSKRL---PYIANGSSDKDKENSHPNVKAATDQSVRRRKGATAATNSKVDKA------------------DGVRRARSE--LGVGVQRKKSLSASGSGGE----QRRFVPQPLGPNKPAVHKAESTPRRSRRIREMTSKTAQ----SHPENKKTESPKQVSVGSERTKAQTKA---------------------KRV---EAKAEIVPSKEHVRSNDEQSSRQRRRTRGKDGXXXXXXXXXXXXXXXXXXXXXXXSVGSDESKSSVQKRTARAKDI--QRPKEQNSAPRKRLRS-SSPTQSAVKADLREKPTELRRSSRLRAQPARNTAEDTNDVQKEDSPQRAANSTAL----KLATTSWDRRRPEQSQHRSHTISKKAPESERGGSIPVADAQVRGTRLRKKVSFGKQVERPARGTDDLSECKEE-----WTQEQREDFETQRNRVPANAPRYWESIAAGVEGKSVEQCLQLWKSTWGSPVAPKIKRVVSFTPGIAD---EPAEKKPKLSTPQAVRNVQKGSKTKRGRNTAKYRIAVRRLADTVARDTKDDALEPEIRTPVGSGKMTGGLFGLPDLQDGTPGTEVRQKRRNAEQGGERATPEILKRGKSFGLREADQYVSLFRQRLGNAPIVATSKKEKPGVDRHIGMKAPLNITPLH--MVSED-LLLSNTQDSDDSAVSDDGDLFF 918          
BLAST of Ggra7505.t1 vs. uniprot
Match: R7QEX0 (Myb-like domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEX0_CHOCR)

HSP 1 Score: 154 bits (390), Expect = 3.590e-36
Identity = 92/202 (45.54%), Postives = 120/202 (59.41%), Query Frame = 0
Query:  704 WSAKQREDFEKQRNSVPANDPNYWELIAAGVEGKTAAQCLELWESSWSSPPCIKRKKVGFADVESEPRTKKPKMSTPQVIQNVQKASKSKRGRNTAKYRTSVRRLADTFARDTEDDALEP----------EIVTPKMSWKLSSGRANMPNLGDGTPGTEVRQKRRNAEKGGELETPEILKRGKSFGLREADLYVSLFRRRLG 895
            WSA QRE+F++QRNSV A+  NYWE+IA+GV GKT  +C  LWESSW+SP    RK+      E+   +K+P+    +++  +Q A+KSKRGRNTAK+R   R LA+  +  T D  LEP           +VTP++          +     GTPGTEVRQ R   E+     TPEIL RG+  G  EAD YVSLF+RR G
Sbjct:  279 WSAAQREEFDRQRNSVAADASNYWEVIASGVRGKTGEECRLLWESSWASPQASGRKR------EAVGLSKRPE----EMMLEMQNAAKSKRGRNTAKFRRQARELAELVSAGTLDTVLEPCVPGAAAARDVVVTPRLQ--------GIGVACKGTPGTEVRQLRERNERAATATTPEILSRGRKIGFAEADQYVSLFKRRAG 462          
The following BLAST results are available for this feature:
BLAST of Ggra7505.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IR464.110e-11634.97Myb-like domain-containing protein n=1 Tax=Gracila... [more]
R7QEX03.590e-3645.54Myb-like domain-containing protein n=1 Tax=Chondru... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015216SANT associatedPFAMPF09133SANTAcoord: 11..102
e-value: 5.8E-11
score: 42.7
NoneNo IPR availableGENE3D1.10.10.60coord: 697..760
e-value: 5.3E-8
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 569..588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 927..956
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 851..870
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..720
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 775..792
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 589..609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..414
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 496..555
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 766..798
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 847..870
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..495
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 700..749

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:218093..220963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7505.t1Ggra7505.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 218093..220963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7505.t1 ID=Ggra7505.t1|Name=Ggra7505.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=957bp
MGAADTNRGAVHLYSWFIEPICARTSKRWNGNVRVWGLQTPSSTTWWRSS
SIAIRNSSTQLTTRFGTNVVLHGTLCETYASRVHMNAVGVDMFRNGFPSQ
WKPSLQSSFSKASSLKWNQAPKNKLNKARANKTVSILKKSARQQQPGKRK
RVRFDVNLRPVDVPCPPSKRPRVTFVRADNQHAEQPPSKARTRSKPPRSV
FAAAPNVATPKSPHIVPKEPYAVAVQDTNASKPVSSKAKPRARRKRNASG
RATNDSNSSSESQPSRGRRAKSKSPASTKRSSHDGSNRSTLVAIPIANSS
DILNIRRSKRIDAEPTLLNARKASSQPTTPTLSKKKQKRNRSNSVPPKPK
RQSAPHAETPKAKRTRSSSVPSKRVKASSHDPRQAEGRRRRRRSSISEYE
NEPKLRERRSSPAHNTPARAETNKSKTTHLRTATVQSKLNATSDAKPLSE
PRRRSRRLSEQLSVPTTKSQTKALVESNSKNQSTHPVTQTTRRSKRILDQ
SSKRGPKPVESKLPKKDEVAVPSRRPKRAQKGARLTDDGSEKENSSREDE
HRSPKHRKAKRGRPRGSVKKTSLETQTSKTPPTGEQEAEQTQTRRRRSTR
VRIRPDDTKNLPTKPTISKKRGATGSSGKEKVVGTGTNKQMKCTKKTESK
ACARTESKPHKASVVQFAKTNLPTLRPRRRVSFGPEFKSDDSVPAPQEGL
TGSWSAKQREDFEKQRNSVPANDPNYWELIAAGVEGKTAAQCLELWESSW
SSPPCIKRKKVGFADVESEPRTKKPKMSTPQVIQNVQKASKSKRGRNTAK
YRTSVRRLADTFARDTEDDALEPEIVTPKMSWKLSSGRANMPNLGDGTPG
TEVRQKRRNAEKGGELETPEILKRGKSFGLREADLYVSLFRRRLGAEPIV
PTSKQVKPGVMRNLAKKPPLNVAKAFEPAVCEDGTSLSDAEGSQDSDSSC
DGDLFF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015216SANTA
IPR009057Homeobox-like_sf