Ggra7502.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7502.t1
Unique NameGgra7502.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length290
Homology
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A2V3IQ63 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ63_9FLOR)

HSP 1 Score: 233 bits (594), Expect = 7.120e-69
Identity = 132/223 (59.19%), Postives = 152/223 (68.16%), Query Frame = 0
Query:   77 AARVQVSAEPHADVS--LSAFQRMEDVDELLALADEFDVNDLRVVDHGVCVEITRARGMGFEDGKLVSVPAATAAAAGDGVVVLDDXXXXXXXXXXXXGAEHGAVPADADGAAAAMQR--------GARQEEVREEKDPDTVYDSDFVVTSNRVGWFFSGAKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD 289
            AA    + E H++    LS+ Q  +DV+++L LA+EFD+ DLRVVDHGVCVE+TR  G+GFEDGKL + PA T       V  + D             A   A  + A GA+AA  +               +EEKDPDTVYDSDFVVTSNRVG+FFSGAKNKPPL NVGD V FNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQ +MVIRPD
Sbjct:  379 AADEHPALEVHSEAQPLLSSIQTFDDVEQILQLAEEFDLKDLRVVDHGVCVEVTRQGGLGFEDGKLNNEPAPTTVP----VSPVGDAGGYPVGEEMAQDASGEAAISVAAGASAAAPKQLDATADDSGMASSRKEEKDPDTVYDSDFVVTSNRVGFFFSGAKNKPPLVNVGDPVKFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQQVMVIRPD 597          
BLAST of Ggra7502.t1 vs. uniprot
Match: R7QE28 (Putative Acetyl-CoA carboxylase biotin carboxyl carrier subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE28_CHOCR)

HSP 1 Score: 214 bits (544), Expect = 2.960e-65
Identity = 122/210 (58.10%), Postives = 142/210 (67.62%), Query Frame = 0
Query:   80 VQVSAEPHADVSLSAFQRMEDVDELLALADEFDVNDLRVVDHGVCVEITRARGMGFEDGKLVSVPAATAAAAGDGVVVLDDXXXXXXXXXXXXGAEHGAVPADADGAAAAMQRGARQEEVREEKDPDTVYDSDFVVTSNRVGWFFSGAKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD 289
            V V   P ADV+ S+ Q + D++E++AL DEFD+ D R+ D GV VEI+RA G GFEDGKL     A    A +G VV +               E  AV  D +GA   +     Q +     DP+TVYDSDFVV SNRVG+F+SGAKNKPPL NVGDHVDFNQPVCIIEQLGQQYVYLSEASGTV +IFVEDGDAVEY Q +MVIRPD
Sbjct:   62 VDVVISPGADVAQSSIQTLTDIEEIIALVDEFDLRDFRLADKGVAVEISRAGGRGFEDGKL-----ARPVRAAEGAVVYETQEPGVVY-------EDEAVTHD-EGAVVDIPT-VEQGKPDPTGDPETVYDSDFVVMSNRVGFFYSGAKNKPPLVNVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVNEIFVEDGDAVEYDQKVMVIRPD 257          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A7V5M3F3 (Lipoyl-binding domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5M3F3_9BACT)

HSP 1 Score: 108 bits (269), Expect = 1.320e-23
Identity = 78/240 (32.50%), Postives = 118/240 (49.17%), Query Frame = 0
Query:   74 ADGAARVQVSAEPHA---------DVSLSAFQR----MEDVDELLALADEFDV--NDLRVVDHGVCVEITRARGMGFED-GKLVSV-------PAATAAAAGDGVVVLDDXXXXXXXXXXXXGAEHGAVPADADGAAAAMQRGARQEEVREEKDP-DTVYDSDFVVTSNRVGWFFSGAKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD 289
            ADG A    +++P A         DVS    ++    + +V E L +  E  +  +D R+      +E++R  G GF++ G+L +        P  ++ A+      +               A   +  A     AA  QR  +  E R   D    + D+DF V SNRVG F +G  ++PP   VGD ++  +PVCIIEQLG  +VY SE SGTV+K+ VEDG  VEYG+ +++IRP+
Sbjct:  112 ADGVALTHTASQPAAGTHTQGVTADVSAPEQRQPGLSLSEVQEFLEVMREVTLYCSDARLQIGSTVIEVSRPDGFGFDEHGELRTAEPHPSTHPGDSSPASAYSAPAMPPDAESSGLGSSAAQATVSSSTASTSARAAIEQRSGKTPEPRPRYDDVSQILDTDFKVISNRVGIFRAGPPSRPPYVKVGDRIEVKRPVCIIEQLGNYFVYNSEVSGTVIKVCVEDGAPVEYGKELVIIRPE 351          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A7J7IGY3 (Lipoyl-binding domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGY3_9RHOD)

HSP 1 Score: 106 bits (265), Expect = 4.940e-23
Identity = 65/175 (37.14%), Postives = 93/175 (53.14%), Query Frame = 0
Query:  125 VEITRARGMGFED-GKLVSVPAATAAAAGD-GVVVLDDXXXXXXXXXXXXGAEHGAVPADADGAAAAMQRGAR--------QEEVREEKDPDTVYDSDFVVTSNRVGWFFSGAKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD 289
            +EI+R  G GF++ G+L +VP+  A          +D              A         D +A + Q G +         E+     D   V D+DF V SNRVG+F +G  ++PP   VGD V+  +PVC+IEQLG  +VY +E SGTV+K+ VEDG  VEYGQ +++IRP+
Sbjct:  178 IEISRPDGRGFDEFGELRAVPSQPATDVERVAPTPVDRRSHGSDATELSTSATKAGTSRRIDASAPSFQTGTQVGRSRASTTEQRPRYDDVSQVLDTDFKVVSNRVGFFHAGPSSRPPFVKVGDRVEVKRPVCMIEQLGNYFVYNAEVSGTVIKVCVEDGAPVEYGQELVIIRPE 352          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A073JW52 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=Bacillus manliponensis TaxID=574376 RepID=A0A073JW52_9BACI)

HSP 1 Score: 67.4 bits (163), Expect = 4.200e-10
Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = 0
Query:  199 VREEKDPDTVYDSDFVVTSNRVGWFFSG-AKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD 289
            V E+K+ D V D+ + + S  VG F+S  A +KPP   VGDHV  +  +C+IE +       +E +G ++++ V DG+ VEYGQ + +I+ +
Sbjct:   71 VSEKKELDDVTDTTYKLVSPMVGTFYSSSAPDKPPFVKVGDHVTADANLCVIEAMKLFNDVQAEVNGEIVEVLVNDGELVEYGQPLFLIKTE 162          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A7C5CH34 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C5CH34_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 5.910e-10
Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 0
Query:  220 VGWFFSGAK-NKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD 289
            VG F+   K   PP   VGDH+   Q VC+IE +       SE SGTV+K+ VEDG  V+YGQ I ++RPD
Sbjct:   93 VGTFYRSPKPGAPPFVEVGDHITAGQVVCLIEAMKLFNEIKSEISGTVVKVLVEDGKPVQYGQVIFLVRPD 163          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A1F4U756 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=candidate division WOR-1 bacterium RIFOXYC2_FULL_46_14 TaxID=1802587 RepID=A0A1F4U756_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 2.290e-9
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
Query:  203 KDPDTVYDSDFVVTSNRVGWFF-SGAKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD 289
            ++P    D    +TS  VG F+ S + + PP  NVGD V   + VCI+E +       SE SG ++KI VE+G  VEYGQ +M+++ D
Sbjct:   64 EEPKNEDDGLVAITSPMVGTFYKSPSPDSPPFVNVGDQVASGKVVCIVEAMKLFNEIESEISGKIVKILVENGKPVEYGQKLMLVKKD 151          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A1V5FLR2 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=candidate division BRC1 bacterium ADurb.BinA292 TaxID=1852824 RepID=A0A1V5FLR2_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 2.480e-9
Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 0
Query:  210 DSDFVVTSNRVGWFF-SGAKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRP 288
            +   V+TS  VG F+ S +  KPP   +GD VD N  +CIIE +       +EA GTV +I VE+G  VEYGQ + V+ P
Sbjct:   73 EEGIVITSPIVGMFYRSPSPEKPPFVEIGDAVDENTVLCIIEAMKVMNEIKAEAVGTVQRILVENGQPVEYGQPLFVLTP 152          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A3S0FN37 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A3S0FN37_9BACT)

HSP 1 Score: 65.1 bits (157), Expect = 3.280e-9
Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:  215 VTSNRVGWFF-SGAKNKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRP 288
            VTS  VG F+ +G+    P  NVGDH+   Q VCIIE +       SE SG ++K+ V++G  VEYGQ + ++ P
Sbjct:   93 VTSPMVGTFYRAGSPTSSPFVNVGDHISVGQTVCIIEAMKLMNDMPSEVSGKIVKVCVDNGTTVEYGQQLFLVDP 167          
BLAST of Ggra7502.t1 vs. uniprot
Match: A0A2V9KUD8 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9KUD8_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 1.180e-8
Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = 0
Query:  214 VVTSNRVGWFFSGAK-NKPPLANVGDHVDFNQPVCIIEQLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRP 288
            ++ S  VG F+SG   + PP  NVGD ++  + +CIIE +       SEA+G ++++FVE+G  VEYGQ +  ++P
Sbjct:  108 IIKSPIVGTFYSGPNPSAPPFVNVGDVIEAGRVLCIIEAMKLMNEIESEAAGEIVRVFVENGQPVEYGQPLFAVKP 183          
The following BLAST results are available for this feature:
BLAST of Ggra7502.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ637.120e-6959.19Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
R7QE282.960e-6558.10Putative Acetyl-CoA carboxylase biotin carboxyl ca... [more]
A0A7V5M3F31.320e-2332.50Lipoyl-binding domain-containing protein n=2 Tax=c... [more]
A0A7J7IGY34.940e-2337.14Lipoyl-binding domain-containing protein n=1 Tax=C... [more]
A0A073JW524.200e-1036.96Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A7C5CH345.910e-1047.89Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A1F4U7562.290e-939.77Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A1V5FLR22.480e-943.75Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A3S0FN373.280e-942.67Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A2V9KUD81.180e-839.47Biotin carboxyl carrier protein of acetyl-CoA carb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 230..286
e-value: 4.8E-9
score: 35.9
NoneNo IPR availableGENE3D2.40.50.100coord: 211..286
e-value: 4.8E-14
score: 54.1
NoneNo IPR availableCDDcd06850biotinyl_domaincoord: 232..286
e-value: 3.02646E-11
score: 55.8852
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 208..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:214458..215327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7502.t1Ggra7502.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 214458..215327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7502.t1 ID=Ggra7502.t1|Name=Ggra7502.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=290bp
MDSAFVPPLGGRLCLRVRRAAALDAPPRRAPRVCAPRAVMSEQHAASASA
SAASAAAASAAASAAAAPPSAAVADGAARVQVSAEPHADVSLSAFQRMED
VDELLALADEFDVNDLRVVDHGVCVEITRARGMGFEDGKLVSVPAATAAA
AGDGVVVLDDGALQAGDGALQVGAEHGAVPADADGAAAAMQRGARQEEVR
EEKDPDTVYDSDFVVTSNRVGWFFSGAKNKPPLANVGDHVDFNQPVCIIE
QLGQQYVYLSEASGTVLKIFVEDGDAVEYGQHIMVIRPD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif