Ggra7501.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7501.t1
Unique NameGgra7501.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length272
Homology
BLAST of Ggra7501.t1 vs. uniprot
Match: A0A2V3IQ63 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ63_9FLOR)

HSP 1 Score: 205 bits (521), Expect = 1.940e-58
Identity = 94/149 (63.09%), Postives = 115/149 (77.18%), Query Frame = 0
Query:   76 RAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSDASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAFVVDGMSLYRLDRAGWVYHHSLENSVRRRTPSYVMERVW 224
            R PEYYANVG VID LRADYPHLL+  P L+IYT+ V F+D+SGN I GK AY+N+ WLLR QA LFLS HCV +QS++HDD  G I+IRWR   SPRSW LLS+    A V+DGMS+YRL+  GWVY HSLEN+VRR+ P++ ++ VW
Sbjct:   57 RCPEYYANVGCVIDKLRADYPHLLSCAPDLSIYTDGVSFADSSGNRIFGKRAYANILWLLRTQAALFLSGHCVYIQSLYHDDSAGTIHIRWRAHLSPRSWILLSAQR--AIVIDGMSVYRLNSDGWVYEHSLENNVRRKGPAHALDHVW 203          
BLAST of Ggra7501.t1 vs. uniprot
Match: A0A6T6C620 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C620_9RHOD)

HSP 1 Score: 147 bits (372), Expect = 1.020e-38
Identity = 71/159 (44.65%), Postives = 101/159 (63.52%), Query Frame = 0
Query:   76 RAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSDASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPR----SWTLLSSATGG------AFVVDGMSLYRLDRAGWVYHHSLENSVRRRTPSYVMERVW 224
            R P+Y+ANVG VI+TLRADYP +L   P  +IYT+ + F D     I+GK AY++ FW LR+   +F SA  V + S+FHDD EG I++RWR+   PR         +S+ GG      +++ DGMS+YR++  G+VY H  +N+V RRTPS  ++ VW
Sbjct:  170 RKPDYHANVGKVIETLRADYPEILTRDPDFSIYTDNILFRDRVAYDIQGKDAYASFFWALRLHCRIFFSATSVEITSLFHDDREGIIHLRWRMWGLPRLLFRGGRSSASSRGGCPREDRSWIFDGMSIYRINNDGFVYEHDWDNNVYRRTPSRALKPVW 328          
BLAST of Ggra7501.t1 vs. uniprot
Match: M1VC28 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VC28_CYAM1)

HSP 1 Score: 117 bits (293), Expect = 4.310e-27
Identity = 61/172 (35.47%), Postives = 88/172 (51.16%), Query Frame = 0
Query:   63 AEPHKQRRGNANYRAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSD-ASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAF------------------------VVDGMSLYRLDRAGWVYHHSLEN 209
            +E    +R   N R+P+Y AN GTVI+TLR+DYPHL    P   +Y+  +   D  SGN ++G  AY  +FW+LR+   L  S   + + S+FHD+ EG +YIRW ++   R W  L     GAF                         ++G S+Y L+  GWV  H+L+N
Sbjct:   96 SEDRDTQRDQRNKRSPDYAANAGTVIETLRSDYPHLFERDPNFEVYSPTITLVDRTSGNVLQGLGAYKAVFWVLRLHGKLLFSERSIEITSLFHDEREGTVYIRWIMRGRLRRWVPLLGL--GAFRLRPEQDAPGWQESTSWEEETRIRQLEGYSMYYLNLDGWVEQHALDN 265          
BLAST of Ggra7501.t1 vs. uniprot
Match: A0A7J7IJW6 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJW6_9RHOD)

HSP 1 Score: 117 bits (293), Expect = 4.370e-27
Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 0
Query:   74 NYRAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSD-ASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLL---------SSATGGAFV-------------VDGMSLYRLDRAGWVYHHSLEN 209
            N R+P+Y+AN GTVI+TLRADYPHL    P   IY   +   D  SGN + G  AY  +FW+LR+   L  S   + + S FHD+ EG +Y+RW ++   R W  L         S  +  ++              V+G S+Y L+  GWV  H+L+N
Sbjct:  107 NRRSPDYWANAGTVIETLRADYPHLFERDPDFQIYAPTIILVDRTSGNVLHGLGAYRAVFWMLRLHGKLLFSERSIQITSFFHDEREGVVYVRWTMRGRLRHWVPLLGLGAIRPGSKQSPSSWQEXXXXXDETRIRQVEGYSMYHLNMDGWVEQHALDN 265          
BLAST of Ggra7501.t1 vs. uniprot
Match: A0A5J4YZ12 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZ12_PORPP)

HSP 1 Score: 114 bits (286), Expect = 9.400e-27
Identity = 70/207 (33.82%), Postives = 99/207 (47.83%), Query Frame = 0
Query:    6 AFCAPLSLSSGACTSLVPAVSARPRAGVRSRAAVRRRQRRVACTQQRAPEGAEGGSGAEPHKQRRGNANYRAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSDASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAFVVDGMSLYRLDRAGWVYHHSLENSVR 212
            A  AP     G    +V  VSA    GV+ R      + R          G  G +G +P+       N R P YYANVG+ I+ LR  YP +L   P+L I+++++ F+D       GK  Y+ L   LR  A        VS+ S+FH+D EG +Y+RWRV   PR     S+      + DGMS+Y  D  G +  H+++NS R
Sbjct:   32 ALAAPRRAHGGRYRRVVLVVSAENVYGVKQRPVAEHSRGRXXXXXXXVSGGTGGSNGKKPNHH-----NQRDPAYYANVGSAIEKLRFAYPRMLEEEPELDIFSDKMVFTDRRTFQFHGKEIYAYLLLTLRFHARCVWREAQVSISSMFHEDREGRVYVRWRVTAKPRFSIAWSAMADNTLIYDGMSVYTFDSHGLIREHNIDNSQR 233          
BLAST of Ggra7501.t1 vs. uniprot
Match: M2Y264 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y264_GALSU)

HSP 1 Score: 108 bits (271), Expect = 2.020e-24
Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 0
Query:   74 NYRAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSD-ASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAFVVDGMSLYRLDRAGWVYHHSLEN 209
            N R PE+YAN+GTVI+TLR+DY H+L      ++Y E +   D   G  ++GK AY  + WLLR+   +        V+S+++DD    IY+RW ++  PR   LL         +DG+S+YRL+  GWV  H ++N
Sbjct:   83 NDRGPEFYANLGTVIETLRSDYSHILEKDIDYSVYDEDLILRDRVHGQYLQGKEAYKTVLWLLRVHTHIAFRQAFTDVKSMYYDDDSAIIYLRWGIRAVPR---LLPWDVHRQRYIDGLSIYRLNCDGWVQEHIVDN 216          
BLAST of Ggra7501.t1 vs. uniprot
Match: A0A7S0T6R1 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6R1_9RHOD)

HSP 1 Score: 105 bits (262), Expect = 4.190e-23
Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 0
Query:   73 ANYRAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSDASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAFVVDGMSLYRLDRAGWVYHHSLENSV 211
            A +R P Y AN+G V+DTLR DYP +L   PQ+ IYT+ V F +     + GK AY   FW LR    + L    + ++S+F D+    I+IRWR+    R   +        +V+DG+S+YRL+  G  Y H+LEN+V
Sbjct:   96 ATHRDPHYLANMGKVLDTLRHDYPRMLTEAPQMDIYTKDVIFRERLTADLHGKDAYLAFFWGLRFHCWVLLRNAQMEIKSLFVDEDRSAIHIRWRLSGYLRLVNV-------NWVLDGLSIYRLNSEGLCYLHTLENTV 227          
BLAST of Ggra7501.t1 vs. uniprot
Match: R7QD65 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD65_CHOCR)

HSP 1 Score: 91.3 bits (225), Expect = 3.430e-19
Identity = 41/82 (50.00%), Postives = 57/82 (69.51%), Query Frame = 0
Query:  134 LLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAFVVDGMSLYRLDRAGWVYHHSLENSVRRRT 215
            +LR QA +F S+  VS+ S+++DD  G IY+RWRV  SPR+W L+ S   G  V+DG+S+Y LDR G V  H LE++ RRR+
Sbjct:    1 MLRAQARVFFSSAAVSITSLYYDDAMGMIYLRWRVSASPRAWVLMGSGRRGPVVLDGLSVYTLDRTGLVAVHQLESNSRRRS 82          
BLAST of Ggra7501.t1 vs. uniprot
Match: A0A5J4Z164 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z164_PORPP)

HSP 1 Score: 93.6 bits (231), Expect = 9.560e-19
Identity = 51/134 (38.06%), Postives = 76/134 (56.72%), Query Frame = 0
Query:   76 RAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSDASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAFVVDGMSLYRLDRAGWVYHHSLEN 209
            R P++ ANVG +I+TLR DYP LL   P L ++TE V   +     + GK+ Y   FW LR    L      V + ++F DD++  + +RWR+  +PR    LS+ T    VVDG+SLYR+++ G+ +   L N
Sbjct:  135 RGPDFNANVGKLIETLRDDYPCLLERAPNLDMFTEDVILREHLTADLHGKNKYWAFFWALRAHMRLMFREPRVEILNLFFDDMDMSVQLRWRLTGAPR----LSNTTR---VVDGISLYRVNQHGFCWMCELTN 261          
BLAST of Ggra7501.t1 vs. uniprot
Match: A0A2V0NYZ6 (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NYZ6_9CHLO)

HSP 1 Score: 90.5 bits (223), Expect = 4.450e-17
Identity = 53/147 (36.05%), Postives = 75/147 (51.02%), Query Frame = 0
Query:   71 GNANYRAPEYYANVGTVIDTLRADYPHLLNAPPQLAIYTERVCFSDASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSVQSIFHDDVEGCIYIRWRVQFSPR-SWTLLSSATGGAFVVDGMSLYRLDRAGWVYHHSLENSVRRRTP 216
            G+   R+P+YYANVG  I TLR D P L +     +IY + + F D   N   G   Y  +FW LR    +F     V V+ I+  + +G I +RW V   PR  W     A G   + DG+S Y+LD  G +Y H+++N + R  P
Sbjct:  140 GDGRERSPDYYANVGDAIRTLREDIPLLFDRELNFSIYRDDITFRDPR-NSFSGIQNYRTIFWSLRFHGRIFFRRIYVEVKRIWQTE-DGLIRMRWTVHGEPRVPW----EAEG---IFDGISQYKLDHEGRIYEHAVDNVILRDPP 277          
The following BLAST results are available for this feature:
BLAST of Ggra7501.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A2V3IQ631.940e-5863.09Biotin carboxyl carrier protein of acetyl-CoA carb... [more]
A0A6T6C6201.020e-3844.65Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M1VC284.310e-2735.47Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7J7IJW64.370e-2737.11Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A5J4YZ129.400e-2733.82Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2Y2642.020e-2438.69Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0T6R14.190e-2339.57Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
R7QD653.430e-1950.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z1649.560e-1938.06Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V0NYZ64.450e-1736.05Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018790Protein of unknown function DUF2358PFAMPF10184DUF2358coord: 86..205
e-value: 9.0E-17
score: 61.4
IPR018790Protein of unknown function DUF2358PANTHERPTHR31094RIKEN CDNA 2310061I04 GENEcoord: 57..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..264
NoneNo IPR availablePANTHERPTHR31094:SF2RIKEN CDNA 2310061I04 GENEcoord: 57..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 105..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:213305..214120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7501.t1Ggra7501.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 213305..214120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7501.t1 ID=Ggra7501.t1|Name=Ggra7501.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=272bp
MSLSCAFCAPLSLSSGACTSLVPAVSARPRAGVRSRAAVRRRQRRVACTQ
QRAPEGAEGGSGAEPHKQRRGNANYRAPEYYANVGTVIDTLRADYPHLLN
APPQLAIYTERVCFSDASGNCIRGKSAYSNLFWLLRMQATLFLSAHCVSV
QSIFHDDVEGCIYIRWRVQFSPRSWTLLSSATGGAFVVDGMSLYRLDRAG
WVYHHSLENSVRRRTPSYVMERVWRPVRARAAEPNMAGVRLAHLHSRRAP
REQPRAEPLRADVEEQRGQPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018790DUF2358
IPR032710NTF2-like_dom_sf