Ggra7499.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7499.t1
Unique NameGgra7499.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length174
Homology
BLAST of Ggra7499.t1 vs. uniprot
Match: A0A2V3IQ32 (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ32_9FLOR)

HSP 1 Score: 238 bits (607), Expect = 9.330e-78
Identity = 129/174 (74.14%), Postives = 145/174 (83.33%), Query Frame = 0
Query:    6 LFVAPMPPLARSSFAPRRADGPALRRVLPPRSGAARMIR------MQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTVQLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKDE 173
            LFVAP  PL ++S     A  PAL +  P R  +A   R      MQLGAPSTQIGRPKT IKKD+GRVT+QPS+P+ D +RGSAKARPRRKTQAD+VPMYKVILLGDE+YVEAHVVTQLQKTVQL+KK+A+RIFWEAQ SGSSI+CVVCEEHAEFYAQQLKRQEIFV+VEKDE
Sbjct:   11 LFVAPGAPLVQTS-----AFTPALPKC-PQRIKSAAQTRPPSRVFMQLGAPSTQIGRPKTSIKKDIGRVTSQPSEPQADAERGSAKARPRRKTQADEVPMYKVILLGDEEYVEAHVVTQLQKTVQLEKKDATRIFWEAQGSGSSIICVVCEEHAEFYAQQLKRQEIFVVVEKDE 178          
BLAST of Ggra7499.t1 vs. uniprot
Match: R7QD62 (ClpS domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD62_CHOCR)

HSP 1 Score: 188 bits (478), Expect = 4.650e-58
Identity = 99/140 (70.71%), Postives = 111/140 (79.29%), Query Frame = 0
Query:   34 PPRSGAARMIRMQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTVQLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKDE 173
            P  + AAR   MQLG+P          IKK VG     P+ PETDT +G+AKARPRRKTQAD+VPMYKVILLG+E+YVEAHVVTQLQKTV +DKKEA+R F EAQ SGSS+VCVVCEEHAEFYAQQLKRQ+IFV VEKDE
Sbjct:   45 PRANQAARFPSMQLGSPXXXXXXXXXSIKKSVGVTNDAPAAPETDTGKGAAKARPRRKTQADEVPMYKVILLGEEEYVEAHVVTQLQKTVGIDKKEATRKFQEAQQSGSSVVCVVCEEHAEFYAQQLKRQDIFVTVEKDE 184          
BLAST of Ggra7499.t1 vs. uniprot
Match: A0A7S0ZCQ5 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCQ5_9RHOD)

HSP 1 Score: 152 bits (384), Expect = 5.420e-44
Identity = 76/130 (58.46%), Postives = 99/130 (76.15%), Query Frame = 0
Query:   43 IRMQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTVQLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKD 172
            + MQL AP  ++G+PK  + KD+ R++    +PE D + GSAKA+PRRKT+ +++P +KVILLGDE Y E HVVTQL K VQL+K EA+R+F  AQA+GS IVCVV EE AEFY QQLKRQEI+ ++E D
Sbjct:   42 VNMQL-APGVKVGKPKVSVSKDMKRLSEPVKEPEADPNAGSAKAKPRRKTEQEEIPKFKVILLGDEGYDEVHVVTQLVKIVQLEKNEAARVFGVAQATGSEIVCVVNEEQAEFYVQQLKRQEIYALMEPD 170          
BLAST of Ggra7499.t1 vs. uniprot
Match: A0A5J4Z5M8 (ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5M8_PORPP)

HSP 1 Score: 150 bits (379), Expect = 4.310e-43
Identity = 76/126 (60.32%), Postives = 100/126 (79.37%), Query Frame = 0
Query:   49 APSTQIGRPKTQIKKDVGRVTAQPS-QPETDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTVQLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKDE 173
            AP  ++GRPKT I+KD GR+T   S +P+ D   G+++A+PRR+T+ +++PMYKVILLGDE+Y E HVVTQL K VQL++ EA+RIF  AQA+GS IV VV EE AEFY QQLKRQE++ I+E+DE
Sbjct:   56 APGIKVGRPKTSIQKDTGRMTETKSPEPQADAAAGASRAKPRRETEMEEIPMYKVILLGDEEYDEVHVVTQLMKIVQLEQIEATRIFGVAQATGSEIVVVVNEELAEFYVQQLKRQELYAIMERDE 181          
BLAST of Ggra7499.t1 vs. uniprot
Match: M2WV12 (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WV12_GALSU)

HSP 1 Score: 128 bits (321), Expect = 4.950e-34
Identity = 65/121 (53.72%), Postives = 94/121 (77.69%), Query Frame = 0
Query:   53 QIGRPKTQIKKDVGRVTAQPSQPE-TDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTV-QLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEK 171
            +I +PKT I+KD  ++ + P Q E T+T  G+A+A+P+RKTQ + VPMYKVILLGDE+Y +  VV  L K + ++++ EA RIF EAQ++G SI+C+V +EHAEFYAQQLKR+E++V +E+
Sbjct:   85 RIAKPKTTIQKDTKKLVSPPKQEELTETGSGAARAKPKRKTQQEFVPMYKVILLGDEEYDQVAVVQALLKVIPKMEQAEARRIFHEAQSTGESIICIVEKEHAEFYAQQLKREEVYVRIEE 205          
BLAST of Ggra7499.t1 vs. uniprot
Match: L1IZP3 (ClpS domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IZP3_GUITC)

HSP 1 Score: 120 bits (301), Expect = 6.460e-32
Identity = 69/138 (50.00%), Postives = 91/138 (65.94%), Query Frame = 0
Query:   37 SGAARMIRMQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTV-QLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKDE 173
            SG +R I MQL +P  QI +PK  I   +G    +  +P+        KA P+RKTQ D+ PMYKVILLGD +Y ++HVVTQ+ K +  + K+E  RIF EAQ +GSS++ V  EEHAE Y QQLKRQ+I+  +EKDE
Sbjct:    3 SGVSR-IGMQLASP--QIAKPKVDIGHQLGTTQPEAGKPKV----AKPKAAPKRKTQDDECPMYKVILLGDNEYEQSHVVTQITKLIPSISKEEGIRIFVEAQMTGSSVIIVCTEEHAEHYVQQLKRQQIYAKMEKDE 133          
BLAST of Ggra7499.t1 vs. uniprot
Match: A0A7S0LX83 (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LX83_9CRYP)

HSP 1 Score: 117 bits (294), Expect = 2.570e-30
Identity = 65/130 (50.00%), Postives = 88/130 (67.69%), Query Frame = 0
Query:   45 MQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTV-QLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKDE 173
            MQL +P  QI RPK  + + +G    + ++P   T   + K  P RKTQ D+ PM+KVILLGD  Y ++HVVTQ+ K +  + K+EA RI+ EAQ +GSS++ V  EEHAE YAQQLKRQ+I+  +EKDE
Sbjct:   52 MQLASP--QIARPKVDLGRSLGLSQPEAAKPGAKT--AAPKVTPVRKTQDDETPMFKVILLGDTDYEQSHVVTQITKVIPSVKKEEAIRIYVEAQMTGSSVIIVCTEEHAEHYAQQLKRQQIYAKIEKDE 177          
BLAST of Ggra7499.t1 vs. uniprot
Match: A0A7S0BIL2 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIL2_9RHOD)

HSP 1 Score: 116 bits (291), Expect = 4.170e-30
Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 0
Query:   85 KARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTV-QLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKD 172
            + +P+ KT AD++PMYKVILLGDE Y E HV TQL K + +    EASR++ EAQ +GSSIVCVV +EHAEFYAQQL+RQEIFVIVE+D
Sbjct:   68 RPKPKYKTDADEIPMYKVILLGDEGYDEVHVTTQLMKIIPKFTSDEASRVYREAQNTGSSIVCVVNKEHAEFYAQQLRRQEIFVIVEED 156          
BLAST of Ggra7499.t1 vs. uniprot
Match: M1URX7 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1URX7_CYAM1)

HSP 1 Score: 113 bits (283), Expect = 2.020e-28
Identity = 64/135 (47.41%), Postives = 96/135 (71.11%), Query Frame = 0
Query:   41 RMIRMQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRK--TQADQVPMYKVILLGDEQYVEAHVVTQLQKTV-QLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKD 172
            R++R Q+ AP  +IGRPKT++K++  R+  +P + E + + G+ + RP+ K  T  + VPM+KVILLGD++Y E HV+  L KT+ ++DK+EA RIF EAQA G S+V VV +EHAEFYA  L+R  ++V +E +
Sbjct:   68 RLVRGQMPAP--KIGRPKTEVKRETFRMP-EPVK-EVEAEAGAVRGRPKTKRVTDTEFVPMWKVILLGDKEYEEKHVIESLVKTIPKMDKEEARRIFKEAQAVGESVVTVVAQEHAEFYATMLRRCSLYVRIEPE 198          
BLAST of Ggra7499.t1 vs. uniprot
Match: A0A7S1E5L2 (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E5L2_HEMAN)

HSP 1 Score: 109 bits (272), Expect = 6.240e-27
Identity = 59/130 (45.38%), Postives = 86/130 (66.15%), Query Frame = 0
Query:   44 RMQLGAPSTQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRKTQADQVPMYKVILLGDEQYVEAHVVTQLQKTV-QLDKKEASRIFWEAQASGSSIVCVVCEEHAEFYAQQLKRQEIFVIVEKD 172
            R QL +P  QI +PK ++   + + +  P  P+T T     K +  +KTQ D+ PMYKVILLGD +Y ++HVVTQ+ K +  + K+EA+R + EAQ  G+S++  V EEHAE Y QQLKRQ+I+  +EK+
Sbjct:   53 RAQLASP--QIAKPKVEVGNPMKQPSTAPGAPKTSTP----KPKLAKKTQDDEAPMYKVILLGDPEYEQSHVVTQITKVIPSVKKEEATRCYVEAQMMGTSVIITVTEEHAEHYVQQLKRQQIYAKMEKE 176          
The following BLAST results are available for this feature:
BLAST of Ggra7499.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3IQ329.330e-7874.14ATP-dependent Clp protease adapter protein ClpS n=... [more]
R7QD624.650e-5870.71ClpS domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A7S0ZCQ55.420e-4458.46Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4Z5M84.310e-4360.32ATP-dependent Clp protease adapter protein ClpS n=... [more]
M2WV124.950e-3453.72ATP-dependent Clp protease adaptor protein ClpS n=... [more]
L1IZP36.460e-3250.00ClpS domain-containing protein n=1 Tax=Guillardia ... [more]
A0A7S0LX832.570e-3050.00Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S0BIL24.170e-3066.29Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1URX72.020e-2847.41ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]
A0A7S1E5L26.240e-2745.38Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 74..171
e-value: 8.2E-15
score: 56.3
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 94..163
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 97..162
e-value: 1.5E-10
score: 40.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:191822..192343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7499.t1Ggra7499.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 191822..192343 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7499.t1 ID=Ggra7499.t1|Name=Ggra7499.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=174bp
MAHTPLFVAPMPPLARSSFAPRRADGPALRRVLPPRSGAARMIRMQLGAP
STQIGRPKTQIKKDVGRVTAQPSQPETDTDRGSAKARPRRKTQADQVPMY
KVILLGDEQYVEAHVVTQLQKTVQLDKKEASRIFWEAQASGSSIVCVVCE
EHAEFYAQQLKRQEIFVIVEKDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR003769ClpS_core