Ggra748.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra748.t1
Unique NameGgra748.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length210
Homology
BLAST of Ggra748.t1 vs. uniprot
Match: A0A2V3J5G1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5G1_9FLOR)

HSP 1 Score: 152 bits (385), Expect = 5.350e-41
Identity = 83/161 (51.55%), Postives = 111/161 (68.94%), Query Frame = 0
Query:   42 PTGAIQICEYSPAPLTAQAVLPAYGSLRSKGPVYFIKQFNVAQLKDISQSTLQEIRTTFGPFPTRNQLLTDVFRLRDLEMTHANQSEPDTYRRNLETFMKMAPEHVLNLARHRPQELLTLMKSSLKVDPNLSPRSVPDSNSFEMASIAISWLLEAVKQVVS 202
            P  A+QI E+ P   T Q  +P + +LRSK P +F+K+ +V+QLK+I QS   E+RT+  PFP R+QLL DV RL DLE + A ++   T RRNL+T MKM+P+  + LAR R  EL  LMKSS+  D +L  RSVP+SN FE A++AISWLL AV+Q+ S
Sbjct:   41 PARAVQIQEHPPT--TTQTAIPQFRNLRSKDPAFFLKRLSVSQLKEILQSAPSELRTSLCPFPFRDQLLGDVLRLHDLEASAATKNITSTDRRNLDTLMKMSPDQGMALARERLDELKVLMKSSVIADSSLKLRSVPESNPFEAAAVAISWLLSAVQQLQS 199          
BLAST of Ggra748.t1 vs. uniprot
Match: A0A2V3II27 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II27_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 8.120e-32
Identity = 83/185 (44.86%), Postives = 106/185 (57.30%), Query Frame = 0
Query:   11 PGPSSQQHNTVIPGTVPSTIPFSNADPSPQFPTG----AIQICEYSPAPLTAQAVLPAYGSLRSKGPVYFIKQFNVAQLKDISQSTLQEIRTTFGPFPTRNQLLTDVFRLRDLEMTHANQSEPDTYRRNLETFMKMAPEHVLNLARHRPQELLTLMKSSLKVDPNLSPRSVPDSNSFEMASIAIS 191
            P P + QH  +     PSTI   N   SP         AI I E  P+  T  A+L  YG+LR K   +++   +V QLK ISQS   E+RT+ GPFP R+ LL DVFRLRDLE+  A+ +    +  N    MK  P  +++LAR   ++L TLMKSS K DP+L  R VP+SN FE ASIAIS
Sbjct:    9 PHPPTSQHPPI-----PSTIAPLNPSESPLXXXXIAPLAIPIIEDPPS-ATNHAIL-LYGNLRPKPHDFYLSNLSVMQLKTISQSAPPELRTSLGPFPPRDSLLGDVFRLRDLELAAASSASASDHH-NHTKLMKTTPAQIMSLARDYLEQLKTLMKSSTKADPSLKHRIVPESNQFEAASIAIS 185          
The following BLAST results are available for this feature:
BLAST of Ggra748.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5G15.350e-4151.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II278.120e-3244.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:172944..173573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra748.t1Ggra748.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 172944..173573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra748.t1 ID=Ggra748.t1|Name=Ggra748.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=210bp
MTPQGTHTPGPGPSSQQHNTVIPGTVPSTIPFSNADPSPQFPTGAIQICE
YSPAPLTAQAVLPAYGSLRSKGPVYFIKQFNVAQLKDISQSTLQEIRTTF
GPFPTRNQLLTDVFRLRDLEMTHANQSEPDTYRRNLETFMKMAPEHVLNL
ARHRPQELLTLMKSSLKVDPNLSPRSVPDSNSFEMASIAISWLLEAVKQV
VSIEAAAPQ*
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