Ggra747.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra747.t1
Unique NameGgra747.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length585
Homology
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BLAST of Ggra747.t1 vs. uniprot
Match: A0A2V3IEF6 (Ankyrin-3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEF6_9FLOR)

HSP 1 Score: 258 bits (658), Expect = 6.890e-75
Identity = 311/602 (51.66%), Postives = 359/602 (59.63%), Query Frame = 0 
Query:    1 MLTSGDVALRMVSACNAQDWHIAESLVDLYGPEAAHVRGIGEYDCTPLHAAAATGQLPLLHQLLRAGAHVDVSALHAFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLEIMSSPKTALVASDSYGRVVPYQSDMYALDLTDP--SYSVDVY--PYDSRYSMDRMRSGYGPYALDTYSSPYGMGPYSS-YYSSAYGXXXXXXXXRHAIDRXXXXXXXXXXXXXXXXXXXXXXSSVFGRYGLMDCNFSSPFSRYGR----SRYGRH----LDKYSSYGGMSSLSRYGMGYGYGSSRHGRYGFRSGGGYGRYSMYDRMGNDYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEDDYQR-----SSMXXXXXXXXXXXXXXXXXRSGLTSRERYRMRGYRSDDIAEMVGSFVGRSMSYSERSRFMSRVERNAQRYRVSGSTLLSDRYGAETLARMLVTDSSGHARSDEMWATAEFIRSFRDGGSYAY 584
            ML+SGDVALRMV+ACN  DWH+AESL+DLYG EAAHVRGIG+YD TPLHAAAATGQLPLL QLLRAGA VD  A   F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                +LL I++SP   L  S+ YG V PYQSDMYALD+  P  SY++D+Y  PY +  ++    +GY P A+D     Y + PYSS Y      XXXXXXXX      XXXXXX                +S FGRYGL+D ++  P S + R    S Y  H          Y        YG+G      ++            RYSMYDRMG+ YD                                                                Y+D+Y       +                   R  L+SRER+RM  YR++ +A+M+G+F  RSMS SER+RFM+R+ RNA RYR+SGSTLLSDRY A+TLARMLVTDSSG+ R++ +WATAEFIRSFR GGSYAY
Sbjct:    1 MLSSGDVALRMVAACNTADWHVAESLLDLYGAEAAHVRGIGQYDATPLHAAAATGQLPLLQQLLRAGAMVDAPARLGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGVTPLQLAEESADLDLLHIITSPNLPLTLSEPYGAVTPYQSDMYALDVVPPASSYALDMYHHPYSAETAL-MPYTGYAPNAMDRL---YAISPYSSRYXXXXXXXXXXXXXXXXXXXXXXXXXXWPVDHLASDRLSLQRHTSAFGRYGLID-SYHGPTSSHARYASYSPYNMHPXXXXXXXXXYDPTFGAHAYGVG------KYPPXXXXXXXXXXRYSMYDRMGHAYDSDPYYRSRSMAPALSEEWGDHLYGAAYG------------------------------------YDDEYHNRGNHLAPYGTYRYGAYGSGGASWRGRHRLSSRERHRMSTYRNEQLADMIGAFACRSMSPSERNRFMNRLARNAHRYRISGSTLLSDRYAADTLARMLVTDSSGNCRNEHLWATAEFIRSFRAGGSYAY 555
The following BLAST results are available for this feature:
BLAST of Ggra747.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEF66.890e-7551.66Ankyrin-3 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 141..170
e-value: 1.3E-7
score: 41.3
coord: 108..137
e-value: 320.0
score: 8.7
coord: 43..72
e-value: 0.0036
score: 26.5
coord: 76..105
e-value: 0.09
score: 21.9
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 81..171
e-value: 1.3E-13
score: 51.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 108..140
score: 9.56435
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 43..75
score: 10.71288
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 76..108
score: 8.57608
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 141..173
score: 14.47899
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 5..198
e-value: 4.3E-41
score: 142.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 14..194
NoneNo IPR availablePANTHERPTHR24178:SF9MOLTING PROTEIN MLT-4coord: 109..188
coord: 42..182
NoneNo IPR availablePANTHERPTHR24178MOLTING PROTEIN MLT-4coord: 109..188
coord: 42..182
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 141..172
score: 13.256964
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 43..72
score: 10.232388

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:56363..58117 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra747.t1Ggra747.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 56363..58117 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra747.t1 ID=Ggra747.t1|Name=Ggra747.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=585bp
MLTSGDVALRMVSACNAQDWHIAESLVDLYGPEAAHVRGIGEYDCTPLHA
AAATGQLPLLHQLLRAGAHVDVSALHAFTPLFMAVRNNRPAAAAILLAAG
ADPDAVCAGTTPLLVAADAGFGPLVAALLRGGASTFVTDERGDTALHLAC
SNGHVNVAQMLLEAGADPTVSNAMAISPLQMAEESGDVELLEIMSSPKTA
LVASDSYGRVVPYQSDMYALDLTDPSYSVDVYPYDSRYSMDRMRSGYGPY
ALDTYSSPYGMGPYSSYYSSAYGPYAMDSYSRHAIDRYGLDRYTPYERYG
YDRFGADRYSSVFGRYGLMDCNFSSPFSRYGRSRYGRHLDKYSSYGGMSS
LSRYGMGYGYGSSRHGRYGFRSGGGYGRYSMYDRMGNDYDGYGAYGSRSL
SSSRSDWSDDWRSGAYGGYGGFGGYGGHGAYGGYGGYGGYGGYGGYGGYG
GYGGYEDDYQRSSMGPYGAYRHGGGHGYRGGRSGLTSRERYRMRGYRSDD
IAEMVGSFVGRSMSYSERSRFMSRVERNAQRYRVSGSTLLSDRYGAETLA
RMLVTDSSGHARSDEMWATAEFIRSFRDGGSYAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf