Ggra7463.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7463.t1
Unique Name	Ggra7463.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	132

Homology

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BLAST of Ggra7463.t1 vs. uniprot
Match: A0A2V3IGS0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGS0_9FLOR)

HSP 1 Score: 201 bits (511), Expect = 3.190e-64
Identity = 101/124 (81.45%), Postives = 111/124 (89.52%), Query Frame = 0

Query:    8 QPPXXXXXAKKLPVTNNPSSKRKLVRNKADVGRSVYADASAGDMVGAPEVGEGMGPRRGVREKKVTKAAAIQKSKGFADAWAEQNQGRVDVWLIIGAITLLTPLLILVWAVATGVIPTGGLFED 131
            Q P      KKLPVTN+P SKRKLVRNK++ G SVYADA AGDMVGAP+VGEG+GPRRG +EKKVT+AAAIQKS+GFADAWAEQNQGRVDVWLIIGA+TLLTPL+IL WAVATGVIPTGGLFED
Sbjct:   30 QQPPESQPPKKLPVTNSPPSKRKLVRNKSETGPSVYADARAGDMVGAPQVGEGLGPRRGAKEKKVTRAAAIQKSQGFADAWAEQNQGRVDVWLIIGALTLLTPLIILAWAVATGVIPTGGLFED 153

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BLAST of Ggra7463.t1 vs. uniprot
Match: A0A7J7IF34 (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IF34_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 1.290e-16
Identity = 36/57 (63.16%), Postives = 48/57 (84.21%), Query Frame = 0

Query:   68 REKKVTKAAAIQKSKGFADAWAEQNQGRVDVWLIIGAITLLTPLLILVWAVATGVIP 124
            R+KKVT+AAA+Q+S  F+DAWA +N+GR+DVW +IG + +L PL IL+W VATGVIP
Sbjct:   68 RKKKVTRAAALQESLSFSDAWAARNRGRIDVWFVIGLLFILLPLGILIWGVATGVIP 124

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BLAST of Ggra7463.t1 vs. uniprot
Match: A0A7S1THP7 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THP7_9RHOD)

HSP 1 Score: 74.7 bits (182), Expect = 2.390e-14
Identity = 40/68 (58.82%), Postives = 46/68 (67.65%), Query Frame = 0

Query:   58 GEGMGPRRGVRE-KKVTKAAAIQKSKGFADAWAEQNQGRVDVWLIIGAITLLTPLLILVWAVATGVIP 124
            G+ +G R G R+ KKVTKAAA Q S GFADAWA   + R DVW  IG  TLL P+ IL W +ATG IP
Sbjct:   90 GDPVGKREGTRKNKKVTKAAAAQGSLGFADAWAASGRNRFDVWFFIGLATLLAPIGILAWGIATGRIP 157

The following BLAST results are available for this feature:

BLAST of Ggra7463.t1 vs. uniprot

BLAST of Ggra7463.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2V3IGS0	3.190e-64	81.45	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A7J7IF34	1.290e-16	63.16	Uncharacterized protein n=1 Tax=Cyanidiococcus yan...	[more]
A0A7S1THP7	2.390e-14	58.82	Hypothetical protein n=1 Tax=Compsopogon caeruleus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 120..131
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 98..119
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..97
None	No IPR available	TMHMM	TMhelix		coord: 98..120

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000102_pilon	contig	tig00000102_pilon:111945..112340 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7463.t1	Ggra7463.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000102_pilon 111945..112340 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7463.t1 ID=Ggra7463.t1|Name=Ggra7463.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=132bp
MSDDVSDQPPPQPPPAKKLPVTNNPSSKRKLVRNKADVGRSVYADASAGD
MVGAPEVGEGMGPRRGVREKKVTKAAAIQKSKGFADAWAEQNQGRVDVWL
IIGAITLLTPLLILVWAVATGVIPTGGLFED*