Ggra7461.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7461.t1
Unique NameGgra7461.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length216
Homology
BLAST of Ggra7461.t1 vs. uniprot
Match: A0A2V3IGR4 (Ras-related protein Rab-11B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGR4_9FLOR)

HSP 1 Score: 381 bits (979), Expect = 3.870e-133
Identity = 190/215 (88.37%), Postives = 202/215 (93.95%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHGEPIKLEALPSRKSPAKSSKCC 215
            MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+NTFESVPRWLKELKDHADSKIVVML+GNKCDLKNER+V+I +GT+AA KFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVV G+IGE + DP GEPIKLE   +    A+++KCC
Sbjct:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKENTFESVPRWLKELKDHADSKIVVMLVGNKCDLKNEREVSIQQGTEAATKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVHGSIGEQASDPRGEPIKLEPSATSAKNARAAKCC 215          
BLAST of Ggra7461.t1 vs. uniprot
Match: A0A1X6NM24 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM24_PORUM)

HSP 1 Score: 271 bits (694), Expect = 9.310e-90
Identity = 136/215 (63.26%), Postives = 168/215 (78.14%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHGEPIKLEALPSRKSPAKSSKCC 215
            MAR +DEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+  +GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK+ TFE + RWLKEL D+AD  IV+ L+GNK DL++ R VT D+GT  +AK  +SF+ETSALD +NV+E+F ++L +I+ I +S  +     E   +P  + I++    +  +  KSSKCC
Sbjct:    1 MARTDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRLTFEGIERWLKELTDNADPNIVIALVGNKADLQHLRAVTADDGTALSAKHQVSFIETSALDGSNVEEAFTRILTEIYRIASSKTLDKGTSEQF-NPSAQTIQINQNTAEDNKPKSSKCC 214          
BLAST of Ggra7461.t1 vs. uniprot
Match: A0A5J4Z794 (Ras-related protein Rab-11B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z794_PORPP)

HSP 1 Score: 271 bits (692), Expect = 2.010e-89
Identity = 138/216 (63.89%), Postives = 169/216 (78.24%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHG-EPIKLEALPSRKSPAKSSKCC 215
            MAR +DEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ + GK +KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KK TFE+V RWLKELKDHAD+ IV+ML+GNK DL++ R VT +EGT  +A   LSF+ETSALDATNV+E+F ++L +I+ I +   +       +   +  E I ++      + +KSSKCC
Sbjct:    1 MARPDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKKGTFENVSRWLKELKDHADANIVIMLVGNKSDLQHLRAVTTEEGTKFSAGNSLSFIETSALDATNVNEAFTRILTEIYRIVSKKTLEKNSNAPAMSNNSFETIVIQNPTDEPAKSKSSKCC 216          
BLAST of Ggra7461.t1 vs. uniprot
Match: A0A672I0C2 (Uncharacterized protein n=3 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672I0C2_SALFA)

HSP 1 Score: 270 bits (690), Expect = 4.040e-89
Identity = 140/216 (64.81%), Postives = 172/216 (79.63%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSG-AIGEHSPDPHGEPIKLEALPSRKSPAKSSKCC 215
            M+  EDEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ ++GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T+E+  RWLKEL+DHADS IV+ML+GNK DL++ R V  DE T  A K GLSFLETSALD+ NV+++F+Q+L +I++I +   +SG +  + SP  +  PI +E  P++ S +K   CC
Sbjct:    1 MSNREDEYDYLFKVVLIGDSGVGKSNLLARFTRNEFNLESKSTIGVEFATRSIQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVPTDEATAFAEKNGLSFLETSALDSHNVEQAFQQILSEIYHIVSQRQMSGRSDSDFSPASNVVPITVE--PTQNSSSKGM-CC 213          
BLAST of Ggra7461.t1 vs. uniprot
Match: A0A1Y2F408 (Ras family-domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F408_PROLT)

HSP 1 Score: 269 bits (688), Expect = 6.640e-89
Identity = 140/216 (64.81%), Postives = 172/216 (79.63%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDP-HGEPIKLEALPSRKSPAKSSKCC 215
            M+R EDEYD+LFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ + GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K+ TFE+V RWLKEL+DHAD+ IV+ML+GNK DLK+ R V  +EGT  A +  LSF+ETSALDA+NV+ +F  +L +I+N+ +S  +  A  E+ P P  G+ I + A P+ K   + SKCC
Sbjct:    1 MSR-EDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQPTFENVQRWLKELRDHADTSIVIMLVGNKSDLKHLRAVPTEEGTQFATENNLSFIETSALDASNVEGAFHSILTEIYNLVSSKALDPA--ENGPRPGDGQRITMTAAPADK---QGSKCC 210          
BLAST of Ggra7461.t1 vs. uniprot
Match: A0A6U0NGV1 (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A6U0NGV1_9VIRI)

HSP 1 Score: 269 bits (688), Expect = 7.110e-89
Identity = 135/215 (62.79%), Postives = 167/215 (77.67%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHGEPIKLEALPSRKSPAKSSKCC 215
            MA+ ++EYDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+ + GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK  T+E+V RWLKEL+DHADS IV+ML+GNK DL++ R V  D+    A K GLSF+ETSAL++TNV+ +F+++L +I+ I +   +    G+  P P     K+E  P+ ++  K S CC
Sbjct:    1 MAKADEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFALESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTYENVERWLKELRDHADSNIVMMLVGNKSDLRHLRAVATDDAAAFAEKEGLSFIETSALESTNVELAFQKILTEIYRIVSKKTIGADEGDAGPGPG---TKIEINPTAQTKKKDSSCC 212          
BLAST of Ggra7461.t1 vs. uniprot
Match: R4X6B5 (Putative Ras GTPase Rab11 n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4X6B5_TAPDE)

HSP 1 Score: 269 bits (687), Expect = 9.430e-89
Identity = 140/215 (65.12%), Postives = 170/215 (79.07%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHGEPIKLEALPSRKSPAKSSKCC 215
            M+R EDEYD+LFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ +  KTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K+NTFE+V RWLKEL+DHADS IV+ML+GNK DL++ R V  +E    AA+  LSF+ETSALDA+NV+ +F+ +L +I+NI +S  +  + G   P   G+ I +   PS +   KSSKCC
Sbjct:    1 MSR-EDEYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDNKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKQNTFENVQRWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTEEAKTFAAENNLSFIETSALDASNVEGAFQNILTEIYNIVSSRALDPSDGALRPT-DGQKIAITNAPSEE---KSSKCC 210          
BLAST of Ggra7461.t1 vs. uniprot
Match: A0A7S2AH65 (Hypothetical protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7S2AH65_9CHLO)

HSP 1 Score: 268 bits (686), Expect = 1.880e-88
Identity = 139/217 (64.06%), Postives = 168/217 (77.42%), Query Frame = 0
Query:    2 ARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHGEPIKLEALPSRKSPAKS---SKCC 215
            ++ +D+YDYLFK+VLIGDSGVGKSNLL RFTRNE  L SK+TIGVEFATRS+PI GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITK  TFE+V RWLKEL+DHAD+ IV+ML+GNK DL++ R V+ +E      K GLSF+ETSAL++TNV+ SFKQ+LE+I+ I + N ++   G  +  P G  I +       S + S   SKCC
Sbjct:    3 SKPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRSLPIDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKTVTFENVERWLKELRDHADANIVIMLVGNKSDLRHLRAVSTEEAAAFCEKEGLSFIETSALESTNVELSFKQILEEIYGIVSKNRMASEEGPSASVPKGNTIAITPGGGDDSSSASKSKSKCC 219          
BLAST of Ggra7461.t1 vs. uniprot
Match: B5X4W2 (Ras-related protein Rab-11A n=18 Tax=Salmonidae TaxID=8015 RepID=B5X4W2_SALSA)

HSP 1 Score: 267 bits (683), Expect = 4.690e-88
Identity = 137/216 (63.43%), Postives = 169/216 (78.24%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIG-EHSPDPHGEPIKLEALPSRKSPAKSSKCC 215
            M   EDEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ ++GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T+E+  RWLKEL+DHADS IV+ML+GNK DL++ R V +DE    A K GLSFLETSALD++NV+ +F+ +L  I+NI +   ++G    + SP+ +  PI ++     ++ AKSS CC
Sbjct:    1 MTNREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVPMDEAKALAEKHGLSFLETSALDSSNVELAFQTILTAIYNIVSQRQMTGRSDTDFSPNSNVVPITVQPT---QNAAKSSACC 213          
BLAST of Ggra7461.t1 vs. uniprot
Match: Q7SY35 (Zgc:63565 n=32 Tax=Cypriniformes TaxID=7952 RepID=Q7SY35_DANRE)

HSP 1 Score: 267 bits (683), Expect = 4.690e-88
Identity = 136/215 (63.26%), Postives = 167/215 (77.67%), Query Frame = 0
Query:    1 MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFATRSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFESVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSFLETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHGEPIKLEALPSRKSPAKSSKCC 215
            M   EDEYDYLFK+VLIGDSGVGKSNLL RFTRNE +L SK+TIGVEFATRS+ ++GKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYDI K  T+E+  RWLKEL+DHADS IV+ML+GNK DL++ R V +DE    A K GLSFLETSALD++NV+ +F+ +L +I+ I +   +SG  G+ S  P  + + +   P++ S  K S CC
Sbjct:    1 MTGREDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIHVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENAERWLKELQDHADSNIVIMLVGNKSDLRHLRAVPMDEAKAFAEKHGLSFLETSALDSSNVELAFQTILTEIYRIVSQRQMSGR-GDDSFSPSSKVVPITVQPTQNS-GKQSACC 213          
The following BLAST results are available for this feature:
BLAST of Ggra7461.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGR43.870e-13388.37Ras-related protein Rab-11B n=1 Tax=Gracilariopsis... [more]
A0A1X6NM249.310e-9063.26Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4Z7942.010e-8963.89Ras-related protein Rab-11B n=1 Tax=Porphyridium p... [more]
A0A672I0C24.040e-8964.81Uncharacterized protein n=3 Tax=Salarias fasciatus... [more]
A0A1Y2F4086.640e-8964.81Ras family-domain-containing protein n=1 Tax=Proto... [more]
A0A6U0NGV17.110e-8962.79Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
R4X6B59.430e-8965.12Putative Ras GTPase Rab11 n=1 Tax=Taphrina deforma... [more]
A0A7S2AH651.880e-8864.06Hypothetical protein n=1 Tax=Pycnococcus provasoli... [more]
B5X4W24.690e-8863.43Ras-related protein Rab-11A n=18 Tax=Salmonidae Ta... [more]
Q7SY354.690e-8863.26Zgc:63565 n=32 Tax=Cypriniformes TaxID=7952 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 12..33
score: 55.67
coord: 115..128
score: 47.35
coord: 35..51
score: 28.66
coord: 53..75
score: 53.98
coord: 150..172
score: 38.55
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 1.8E-101
score: 353.1
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..214
e-value: 2.4E-5
score: 26.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..175
e-value: 2.4E-25
score: 100.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..215
NoneNo IPR availablePANTHERPTHR47978:SF12OS03G0843100 PROTEINcoord: 1..215
NoneNo IPR availablePANTHERPTHR47978FAMILY NOT NAMEDcoord: 1..215
NoneNo IPR availablePROSITEPS51419RABcoord: 7..215
score: 34.043282
NoneNo IPR availablePROSITEPS51420RHOcoord: 5..176
score: 9.331104
NoneNo IPR availableCDDcd01868Rab11_likecoord: 9..173
e-value: 2.32289E-120
score: 336.454
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 14..175
e-value: 2.0E-10
score: 14.2
IPR001806Small GTPasePFAMPF00071Rascoord: 13..173
e-value: 2.0E-60
score: 203.1
IPR001806Small GTPasePROSITEPS51421RAScoord: 4..215
score: 17.706293
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..188
e-value: 1.3E-69
score: 235.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..175
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..168
e-value: 3.2E-37
score: 125.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:109769..110629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7461.t1Ggra7461.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 109769..110629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7461.t1 ID=Ggra7461.t1|Name=Ggra7461.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=216bp
MARNEDEYDYLFKIVLIGDSGVGKSNLLLRFTRNEVDLNSKTTIGVEFAT
RSVPIQGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKNTFE
SVPRWLKELKDHADSKIVVMLLGNKCDLKNERQVTIDEGTDAAAKFGLSF
LETSALDATNVDESFKQVLEQIHNITTSNVVSGAIGEHSPDPHGEPIKLE
ALPSRKSPAKSSKCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom