Ggra7458.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7458.t1
Unique Name	Ggra7458.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	413

Homology

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BLAST of Ggra7458.t1 vs. uniprot
Match: A0A2V3IGW6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGW6_9FLOR)

HSP 1 Score: 479 bits (1232), Expect = 1.780e-165
Identity = 276/401 (68.83%), Postives = 313/401 (78.05%), Query Frame = 0

Query:   17 PSNQPPSLPRATTFRQSRPASTGPSGLRRGAATFVNRPLSHNATSRLPEGPPNIPRLRRGTTFRELPAKQPPSEDGKPQLRRGSYR-KSAVNPQRAPFRSANADQVARKTAVDSPA-RLPRAGTFAYG-AQQRPKRVDNGSDEASVRRMSSSEKKLLEKRCCGMCSSCGTGLKGMPPWAPERLKLLSEQERETVLMELHHKEEMGKLEAELRRKRIADRNAVAEQIQNRLGRRISTND-ASFSSDSNNTEETKRVSLEEQELESVDLGADELDTKSSTSVSVSDCAQSSDTFKMHSSMKRERSVIDDECEECDDMEGRVQDLEEQLDVLREVVNMCSQNEEAS-KRESNTEKKGKSWMGKITSAYYGSSVAASERNRLKGEVEALRKATDFLFQKLQTNGS 412
            PSN P  LPRATTFRQSRPASTGP+GLRRGA TFVNRP SHNA+      PP +PRLRRGTTFR  P K+ P EDGKPQLRR S R  SAVNP           Q  R   V SP  RLPRAGTF+Y  AQQ        ++E  +RRMSSSEK +LEKRCCGMCSSCGTGLK MPPWAPERLKLLS++ERETVL ELHHKEEMG+LEAELRRKR+ADRNAV+E+IQNRL +R+S +D AS SSDSN             +LESVDLGADE+ T+S+T+VS+S      DT  +  SMKRERS ++DEC+ECDD+EGRV+DLEEQLDVLREVVNMCS+NE+AS +R+S++EKKGKSWMGKI SAYYGSS AA+ERNRLKGEVEALRKATDFLFQKLQ NGS
Sbjct:   11 PSNSPARLPRATTFRQSRPASTGPTGLRRGA-TFVNRPQSHNASLNKSHTPPQVPRLRRGTTFRGTPPKKAPPEDGKPQLRRASQRFASAVNPA----------QPVRAPIVSSPPPRLPRAGTFSYSSAQQNNVHAVVAAEEGRIRRMSSSEKAVLEKRCCGMCSSCGTGLKAMPPWAPERLKLLSQEERETVLRELHHKEEMGRLEAELRRKRLADRNAVSERIQNRLAKRVSVSDQASLSSDSNXXXXXXXXXXX-XDLESVDLGADEMYTQSTTTVSMSXXXXXXDTLTLPVSMKRERSTLEDECQECDDVEGRVKDLEEQLDVLREVVNMCSENEQASSRRDSHSEKKGKSWMGKIASAYYGSSTAAAERNRLKGEVEALRKATDFLFQKLQVNGS 399

The following BLAST results are available for this feature:

BLAST of Ggra7458.t1 vs. uniprot

BLAST of Ggra7458.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IGW6	1.780e-165	68.83	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 317..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..39

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000102_pilon	contig	tig00000102_pilon:86848..88086 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7458.t1	Ggra7458.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000102_pilon 86848..88086 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7458.t1 ID=Ggra7458.t1|Name=Ggra7458.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=413bp
MQSPTPPTPPSEPLSPPSNQPPSLPRATTFRQSRPASTGPSGLRRGAATF
VNRPLSHNATSRLPEGPPNIPRLRRGTTFRELPAKQPPSEDGKPQLRRGS
YRKSAVNPQRAPFRSANADQVARKTAVDSPARLPRAGTFAYGAQQRPKRV
DNGSDEASVRRMSSSEKKLLEKRCCGMCSSCGTGLKGMPPWAPERLKLLS
EQERETVLMELHHKEEMGKLEAELRRKRIADRNAVAEQIQNRLGRRISTN
DASFSSDSNNTEETKRVSLEEQELESVDLGADELDTKSSTSVSVSDCAQS
SDTFKMHSSMKRERSVIDDECEECDDMEGRVQDLEEQLDVLREVVNMCSQ
NEEASKRESNTEKKGKSWMGKITSAYYGSSVAASERNRLKGEVEALRKAT
DFLFQKLQTNGS*