Ggra7454.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7454.t1
Unique NameGgra7454.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length325
Homology
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BLAST of Ggra7454.t1 vs. uniprot
Match: A0A2V3IGR0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGR0_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 7.830e-75
Identity = 136/319 (42.63%), Postives = 184/319 (57.68%), Query Frame = 0 
Query:    7 ISTVLFVFTIVVN----LCFASEQIGYIISEDFIGHPLVCQGQCHHAQSPAVLLGNALGIETNFMPKHMRMASEFLAQDGQSLATVNG---RADKASLKSIIKKYMGDDEDDSDNSCEEEDCTFLQSTLNCSDEGTHTGIGFVPLLSMNDGGYIFARVSSGISGLRDRYFSLEGEGGRAGYTVFVGSPNGAPTTVFAVLQPTRIGSGPKGSLKFLIEQALISSPTRDRVGLKSKLYRSGKFINSECEFDEDTPFRPLPNGLIREIERDGLLTANENFKIDFGRETNITSVEVTLGHKQCMAIVLSTAPPCCVVNVNIPV 318
            IS +LF+ ++ +N    L    ++  YII  +F G  L C G CH AQ     L +   +E  FM +H+  A ++     +     N    + D ++ ++      G         C   +C+  +    CS+ G  + I +VPLLS  D GYIFA +SS I+GLR RYFSLEG GGR+GYTVF G P+  P T+FA+LQPTR+G  P     FLIEQALI S  R RV L+SK+ R GKF NS C F ++ PF P  NG I + E   L +ANENF + F  ETN+T+V +++ + +C+AIVLST P CCVVN  IPV
Sbjct:    4 ISVLLFILSLFLNGGSGLKSPGDENKYIIHHNFAGSDLTCSGACHQAQQAFPQLTDVQQMEFAFMRQHLNRADDYFTPTARQPGKHNNPNKQEDTSNEQTHHSNGHG-----PQKRCVPLNCSLPEHAAECSNAGMTSSIAYVPLLSSEDTGYIFASISSSIAGLRSRYFSLEGPGGRSGYTVFTGIPSEGPVTLFAILQPTRLGPLPSHKSNFLIEQALIFSSGRGRVPLQSKMIRHGKFNNSLCTFLDNEPFVPFSNGKINQTESKRLSSANENFSVGFRTETNVTAVRISIKNDECVAIVLSTGPGCCVVNAEIPV 317
The following BLAST results are available for this feature:
BLAST of Ggra7454.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IGR07.830e-7542.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..324
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:77320..78392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7454.t1Ggra7454.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 77320..78392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7454.t1 ID=Ggra7454.t1|Name=Ggra7454.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=325bp
MKIRTVISTVLFVFTIVVNLCFASEQIGYIISEDFIGHPLVCQGQCHHAQ
SPAVLLGNALGIETNFMPKHMRMASEFLAQDGQSLATVNGRADKASLKSI
IKKYMGDDEDDSDNSCEEEDCTFLQSTLNCSDEGTHTGIGFVPLLSMNDG
GYIFARVSSGISGLRDRYFSLEGEGGRAGYTVFVGSPNGAPTTVFAVLQP
TRIGSGPKGSLKFLIEQALISSPTRDRVGLKSKLYRSGKFINSECEFDED
TPFRPLPNGLIREIERDGLLTANENFKIDFGRETNITSVEVTLGHKQCMA
IVLSTAPPCCVVNVNIPVSHGGGC*
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