Ggra745.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra745.t1
Unique NameGgra745.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length179
Homology
BLAST of Ggra745.t1 vs. uniprot
Match: A0A2V3IIU7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU7_9FLOR)

HSP 1 Score: 166 bits (420), Expect = 2.580e-49
Identity = 104/179 (58.10%), Postives = 125/179 (69.83%), Query Frame = 0
Query:    1 MMSCTNRAAFALSTPVSHHR-RSSFTASRTTRQPTTHLTLRRRASYAPLNLRMSDVDQTTAPENPVDPVPSEPPQSAETPQAAPEEVDTNTSAADILKSMREDSAADEANTSPDDPPRSMLGVYRDVDGRSNVWAVEPREQEDTRPQISKVTLLAAAAGFIVLALLVLPLLPFTNPDQL 178
            M S +N  AF+++TP+ H R   + T+ RT+ +  T  T RRRAS  PL +  ++ D+  + E   +   +E PQ  E  +A        TSAADILKS+REDSAAD A    DD PRSMLGVYRDVDGRSNVWAVEP EQEDTRPQ+SK  L+AAAAGFI+LALLVLPLLPFTNPDQL
Sbjct:    1 MASLSNTMAFSVATPLLHPRVMPARTSLRTSTRAFT--TARRRASAFPLQMTSAEQDKNASTEQASE---AELPQQPEQLEAPATSEAQTTSAADILKSLREDSAADSAKKPDDDAPRSMLGVYRDVDGRSNVWAVEPAEQEDTRPQLSKTALIAAAAGFIILALLVLPLLPFTNPDQL 174          
BLAST of Ggra745.t1 vs. uniprot
Match: R7QHX6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHX6_CHOCR)

HSP 1 Score: 115 bits (287), Expect = 2.140e-29
Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 0
Query:   80 QAAPEEVDTNTSAADILKSMREDSAADEANTSPDDPPRSMLGVYRDVDGRSNVWAVEPREQEDTRPQISKVTLLAAAAGFIVLALLVLPLLPFTNPDQL 178
            QA   E D  TSA +IL ++R ++AAD+  +      RSMLGVYRDVDG+SNVWAVEP E+ DT PQISK T++ A+A FIV+ALLVLPLLPFTNPDQ+
Sbjct:   67 QAEGSEPDPTTSATEILDTLRAEAAADDTPSE-----RSMLGVYRDVDGKSNVWAVEPEEKTDTGPQISKTTIIVASAIFIVVALLVLPLLPFTNPDQI 160          
BLAST of Ggra745.t1 vs. uniprot
Match: M1V784 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V784_CYAM1)

HSP 1 Score: 55.1 bits (131), Expect = 2.220e-6
Identity = 34/76 (44.74%), Postives = 44/76 (57.89%), Query Frame = 0
Query:  104 AADEANTSPDDPPRSMLGVYRDVDGRSNVWAVEPREQ-EDTRPQISKVTLLAAAAGFIVLALLVLPLLPFTNPDQL 178
            A D     P  P R+  G   D DG+SNVWA+EPR   E +   ++K  L  A AGF+ LA++VL  LP TN DQ+
Sbjct:   81 ATDVDMPMPSRPRRT--GATVDADGKSNVWAIEPRVYTESSGESVTKKYLALAIAGFVGLAIIVLRFLPLTNADQM 154          
BLAST of Ggra745.t1 vs. uniprot
Match: A0A5J4YND0 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YND0_PORPP)

HSP 1 Score: 53.9 bits (128), Expect = 6.050e-6
Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   95 ILKSMREDSAADEANTSPDDPPRSMLGVYRDVDGRSNVWAVEPREQEDTRPQISKVTLLAAAAGFIVLALLVLPLLPFTNPDQ 177
            +++ +R+    D   T+P   PR+ LG   D +G+SN+WAVEP+E  D   +   +  +AA A FIV+A L+     F + DQ
Sbjct:   73 VMRELRDAQDKDSKTTAPS-KPRNRLGATIDEEGKSNIWAVEPKESMDAEEKSYLLYAVAAVAFFIVVAFLLPQTGVFNSADQ 154          
The following BLAST results are available for this feature:
BLAST of Ggra745.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IIU72.580e-4958.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QHX62.140e-2962.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M1V7842.220e-644.74Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A5J4YND06.050e-636.14Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..178
NoneNo IPR availableTMHMMTMhelixcoord: 150..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000164_piloncontigtig00000164_pilon:53243..53779 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra745.t1Ggra745.t1Gracilaria gracilis GNS1m malemRNAtig00000164_pilon 53243..53779 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra745.t1 ID=Ggra745.t1|Name=Ggra745.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=179bp
MMSCTNRAAFALSTPVSHHRRSSFTASRTTRQPTTHLTLRRRASYAPLNL
RMSDVDQTTAPENPVDPVPSEPPQSAETPQAAPEEVDTNTSAADILKSMR
EDSAADEANTSPDDPPRSMLGVYRDVDGRSNVWAVEPREQEDTRPQISKV
TLLAAAAGFIVLALLVLPLLPFTNPDQL*
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