Ggra7440.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7440.t1
Unique NameGgra7440.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length156
Homology
[Close]
BLAST of Ggra7440.t1 vs. uniprot
Match: A0A5C8K0N0 (DUF3598 domain-containing protein n=2 Tax=Nonomuraea TaxID=83681 RepID=A0A5C8K0N0_9ACTN)

HSP 1 Score: 65.5 bits (158), Expect = 1.400e-10
Identity = 39/136 (28.68%), Postives = 69/136 (50.74%), Query Frame = 0 
Query:   14 HLGTWVGTFTFMDPHTWKQTDKHGSQVEVGI-RGGAYS--QRNTYTWDDGRKQVKEFGGRAIDGCLEIENKALKGRAHGIGGNDLFFNAELKERKES-VYEVIRMLGEDK-RTRLWQVSDGEKITAVVYIEEDRIS 144
            HLG W G +  +D    K  D+H S +   I   G++S  Q NTYTWDDGR++V +FGGR  +     + + + G    +    +      K+   + +YE+I++  + + + R W   DG+++     I E +++
Sbjct:   14 HLGEWRGEYIHVDADG-KIVDRHASHLYCRIPEDGSFSFIQTNTYTWDDGRQEVFDFGGRVENEIAYFDTERITGEMSQVDDLTIVLTWSYKDDPGNYLYELIQLSRDGRHKCRTWHWMDGDRLVKRTIISETKVA 148
[Close]
BLAST of Ggra7440.t1 vs. uniprot
Match: A0A2G4FZP0 (DUF3598 domain-containing protein n=2 Tax=unclassified Actinomycetia TaxID=52018 RepID=A0A2G4FZP0_9ACTN)

HSP 1 Score: 55.8 bits (133), Expect = 6.380e-7
Identity = 37/128 (28.91%), Postives = 58/128 (45.31%), Query Frame = 0 
Query:   16 GTWVGTFTFMDPHTWKQTDKHGSQVEVGIRGGAYSQRNTYTWDDGRKQVKEFGGRAIDGCLEIENKALKGRAHGIGGNDLFFNAELKERKE-SVYEVIRMLGEDKRTRLWQVSDGEKITAVVYIEEDR 142
            G W GT++   P      +K+GS+ E  + G  + +R  Y+++D  K+  +F        L  E++   GR          F    K +   S+ E+I M+  D RTRLWQ  +  K+     IEE R
Sbjct:   13 GVWEGTYSHFKPDG-TLIEKYGSRQETRLDGNNWFERILYSYNDKPKETLDFRAILSGENLLFEDENFLGRTIVASPTIYVFPYTWKNKPHLSILEIINMVTNDYRTRLWQHYEHGKLIKTTLIEETR 139
The following BLAST results are available for this feature:
BLAST of Ggra7440.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5C8K0N01.400e-1028.68DUF3598 domain-containing protein n=2 Tax=Nonomura... [more]
A0A2G4FZP06.380e-728.91DUF3598 domain-containing protein n=2 Tax=unclassi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 9..146
e-value: 4.2E-6
score: 29.1
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 12..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000102_piloncontigtig00000102_pilon:20798..21265 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7440.t1Ggra7440.t1Gracilaria gracilis GNS1m malemRNAtig00000102_pilon 20798..21265 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7440.t1 ID=Ggra7440.t1|Name=Ggra7440.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=156bp
MEKATEFPASVRAHLGTWVGTFTFMDPHTWKQTDKHGSQVEVGIRGGAYS
QRNTYTWDDGRKQVKEFGGRAIDGCLEIENKALKGRAHGIGGNDLFFNAE
LKERKESVYEVIRMLGEDKRTRLWQVSDGEKITAVVYIEEDRISKDDVFF
DVGDA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin