Ggra7435.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7435.t1
Unique NameGgra7435.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length301
Homology
BLAST of Ggra7435.t1 vs. uniprot
Match: A0A2V3IFU2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFU2_9FLOR)

HSP 1 Score: 395 bits (1015), Expect = 1.640e-134
Identity = 212/320 (66.25%), Postives = 254/320 (79.38%), Query Frame = 0
Query:    1 MPPLATAAAAA-GDRSEVQVFSSDHTSTSPPPPENPSREWQSRPGVDLLLPDDPG-------------------AAFLRRLSEVLTAAIVAYRQSSASADHLDLARKAAGATGLIATEIRRISGRQLRIVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRDSALPWRPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADIGADFRATGFSAVDDGVQKAASRVAK 300
            + P ATAAAA+ GDR++ +V  S HT+TS P PE+ +  WQSRPGVDLLLP DPG                   AAFLRRLSEVL AAI+AY+ +S S DH+DLA KAA ATG++A+EI R +GR++ + G+GH+LGAKCLLLAGCE  AR+A PH+ANIFISF+N++RDSALPWRP DSKAAADA SNVS F +SLD+S+ G PDAE+TMKNVVGTVSA+GASLSTEF P+ EETIA+AGARY    N++LSFDDD+LDHSEEL  VLR+RLGPKSVVRR + GTH+TPMT DIG++F  TGFSAVDD VQKAA R+AK
Sbjct:   43 LAPRATAAAASPGDRAD-RVSPSTHTNTSTPNPEDNNPSWQSRPGVDLLLPADPGVIISFTGGFAAGLAPRTTYAAFLRRLSEVLNAAIIAYKLTSPSGDHIDLANKAASATGVVASEICRSAGREIPVFGVGHSLGAKCLLLAGCEARAREASPHAANIFISFNNASRDSALPWRPPDSKAAADALSNVSAFLTSLDISKFGIPDAEQTMKNVVGTVSAIGASLSTEFHPSSEETIAIAGARYAIHQNLILSFDDDTLDHSEELETVLRSRLGPKSVVRRIVPGTHMTPMTPDIGSEFVTTGFSAVDDTVQKAAVRIAK 361          
BLAST of Ggra7435.t1 vs. uniprot
Match: R7Q587 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q587_CHOCR)

HSP 1 Score: 128 bits (322), Expect = 1.270e-30
Identity = 95/272 (34.93%), Postives = 142/272 (52.21%), Query Frame = 0
Query:   53 PGAAFLRRLSEVLTAAIVAYRQS--SASADHLDLARKAAGATGLIATEIRRISGRQ----LRIVGIGHALGAKCLLLAGCEPEARKAC-PHSANIFISFDNSTRDSALP-WRPSDSKAAADA-------FSNVSEFPSSLDVSQVGRP-------DAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADIGA----DFRATGFSAVDDGVQKAASRV 298
            P A + R L E+     VA   +  + S DHL LA   A A+  +    R + GR     +   G+GH+LGAK  LLA C+ +AR+A  P  AN+F++F+N T   ++P W    S    ++        S V++F  SLD+S +           A   +K V  T+ +  +S + EF PTP+ET+ L  +RY    N+++SF  D+L  +E L +VL  R G +S V R L GTH+TP+T ++G     DF   G   ++D V+KAA  V
Sbjct:  115 PRALYGRFLEEIARRGNVAIVAAPVNPSFDHLALA---ADASEKLGDATRELVGRWDVPWIPTFGMGHSLGAKVQLLANCDEDARQALGPTVANLFLAFNNYTAKQSIPMWDAIQSAIGEESTAKSIKELSKVADFLRSLDLSGLADSRSADSVNQASDVLKKVGDTMKSFASSTTDEFTPTPDETLQLVRSRYNVPENLLISFSRDTLSQNEALEDVLCTRFGARSAVIRKLEGTHVTPLTPNLGTGEAPDFAGVGIPGLNDQVRKAAGGV 383          
BLAST of Ggra7435.t1 vs. uniprot
Match: K9XSH4 (Uncharacterized protein n=2 Tax=Stanieria TaxID=102115 RepID=K9XSH4_STAC7)

HSP 1 Score: 74.7 bits (182), Expect = 6.460e-12
Identity = 60/199 (30.15%), Postives = 92/199 (46.23%), Query Frame = 0
Query:   80 DHLDLARKAAGATGLIATEIRR---ISGRQLRIVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRDSALPWRPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADI 275
            DHL +AR        I   ++R   I+   L I GIGH++G K  LL G   E  +A     NI ISF+N     A+P+         + F+N   F  SL+V+                       + + EF P+P ET  L  + Y    N+++ F++D++D +  L  VL+ R  P+ +   TL G HLTP++ +I
Sbjct:   62 DHLAIARDVLNRFETILDRLQRNNFITKGYLPIYGIGHSMGCKLHLLIGSLYEVERA----GNILISFNNYPASRAIPF--------LEQFNNT--FTLSLNVNP----------------------AFNVEFSPSPTETSELIASNYNIRRNLLIKFNNDTIDQTITLEPVLQQRF-PEMIATLTLPGNHLTPLSQEI 223          
BLAST of Ggra7435.t1 vs. uniprot
Match: A0A0G4EQX9 (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EQX9_VITBC)

HSP 1 Score: 73.6 bits (179), Expect = 5.210e-11
Identity = 75/254 (29.53%), Postives = 111/254 (43.70%), Query Frame = 0
Query:   53 PGAAF---LRRLSEVLTAAIVAYRQSSASADHLDLARKAAGATGLIATEIRRISGRQLRIVGIGHALGAKCLLLAGCEP----EARKACPHSANIFISFDNSTRDSALPWRPSDSKAAADAFSNVSEFPS-----------SLDVSQVGR----------------PDAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPK--SVVRRTLLGTHLTP 270
            P AA+   L  L  +  A IVA     A+ DHL    +A+        E   ++   + I+GIGH+LG+K L+L G  P    E       S+NIF++F+N     ++P+  S  ++A      +  +             SLD S  GR                P A+  + N+    SAL A+L  EF P P  T  +  + Y    N V+ F  D +D S+ L  +L +++ PK  S    TL GTH TP
Sbjct:  120 PRAAYGPLLEGLCRLTGAVIVATPLPLATFDHLRACVEASLQFSETVREDLGMTESSVPIIGIGHSLGSKVLMLLGALPADSKERLSLITPSSNIFLAFNNYGASQSIPFY-SQLRSAGQQLGGLGPYGDVLGELLGGGLQSLDDSYGGRLGRLGRSFLREMGVGGPQADNMISNLP---SAL-ANLPEEFTPDPASTWRILESSYGVERNAVIKFTRDGIDESDRLAGLLVSKMDPKGGSTDFITLPGTHTTP 368          
BLAST of Ggra7435.t1 vs. uniprot
Match: DUF1350 family protein n=1 Tax=Geminocystis herdmanii TaxID=669359 RepID=UPI000347AD23 (DUF1350 family protein n=1 Tax=Geminocystis herdmanii TaxID=669359 RepID=UPI000347AD23)

HSP 1 Score: 71.6 bits (174), Expect = 8.610e-11
Identity = 53/171 (30.99%), Postives = 77/171 (45.03%), Query Frame = 0
Query:  105 RQLRIVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRDSALPWRPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADI 275
            R L + G+GH++G K  LL G   +  +A     NIFISF+N     A+P+             N+              P  +  +KN +     +  SL  EF P PEET  +    Y    N+++ F++DS+D +  L  +L   L P  V   TL G HLTP+  DI
Sbjct:   91 RYLPMYGLGHSMGCKLHLLIGSLFDIERA----GNIFISFNNYPLKQAIPF-----------MENII-------------PSLQNNLKNYL----QIDNSLEFEFTPCPEETKVIIKENYQIRRNLLVKFNNDSIDQTSTLQPIL-TNLFPSMVSTLTLQGNHLTPLGQDI 228          
BLAST of Ggra7435.t1 vs. uniprot
Match: A0A0S3TKV7 (Uncharacterized protein n=8 Tax=Fischerella TaxID=1190 RepID=A0A0S3TKV7_9CYAN)

HSP 1 Score: 69.3 bits (168), Expect = 4.830e-10
Identity = 57/191 (29.84%), Postives = 86/191 (45.03%), Query Frame = 0
Query:   94 LIATEIRRISGRQ-LRIVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRDSALPWRPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADI----GADF 279
            L+  E R + G++ L I GIGH++G K  LL G      +A     NI ISF+N               AA DA   + +F S+   +                      +S + EF P+P ET  L   +Y    N+++ F++D++D S  L  +L+ R  P+ V  + L G HLTP+  D+    G DF
Sbjct:   77 LLRLEDRGMLGKKYLPIYGIGHSMGCKLHLLIGSLFPVERA----GNILISFNNY--------------AARDAIPLIEQFNSTFQSN----------------------SSFAVEFTPSPLETKQLIQEKYSVRRNLLIKFNNDTIDQSASLAELLQNRF-PEMVTTQILPGNHLTPLGQDVKWQTGKDF 226          
BLAST of Ggra7435.t1 vs. uniprot
Match: A0A0D6AM50 (Alpha/beta superfamily hydrolase n=1 Tax=Geminocystis sp. NIES-3709 TaxID=1617448 RepID=A0A0D6AM50_9CHRO)

HSP 1 Score: 69.3 bits (168), Expect = 4.990e-10
Identity = 70/264 (26.52%), Postives = 108/264 (40.91%), Query Frame = 0
Query:   38 EWQSRPGVDLLLPDDP-------GAAFLRRLSEVLTAAIVAYRQ-------------SSASADHLDLARKAAGATGLIATEIRRISGRQ------LRIVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRDSALPWRPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADI 275
            EWQ   G  +L+P++P       G AF      V TA  + YR              +++  + LD    A      +   + R+  R+      L + G+GH++G K  LL G   E  +A     NIFISF+N     A+P+  +   +  D   N  +  ++L+                             EF P+PEET  +    Y    N+++ F++DS+D +  L  +L   L P  V   TL G HLTP+  DI
Sbjct:    2 EWQEFSGSWVLIPENPIGIIHFLGGAF------VATAPHITYRWLLENLAKKGYIIIATSFLNTLDHKSIALNVQNRLENILYRLEYRESIELSYLPVYGLGHSMGCKLHLLIGSLFEIERA----GNIFISFNNYPLKQAIPFVENIIPSLRDNLKNYWKIDNNLEF----------------------------EFTPSPEETKIIVKENYQIRRNLLVQFNNDSIDETSTLKPIL-TDLFPDMVSVLTLQGNHLTPLGQDI 226          
BLAST of Ggra7435.t1 vs. uniprot
Match: A0A7R9VMH0 (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VMH0_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 1.180e-9
Identity = 78/303 (25.74%), Postives = 123/303 (40.59%), Query Frame = 0
Query:   12 GDRSEVQVFSSDHTSTSPPPPENPSREWQSRPGVDLLLPDDPGAAFLRRLSEVLTAAIVAYRQSSASAD------HLDLARKAAGATGLIATEIRRISGRQLR------IVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRDSALPW-----------RPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSAL-GASLSTE---------------FRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADI 275
            G RS +   +S     SPPP   P+R      GV   L      A  + L  +L   + A   +S +        H + A +  G+      E+R   G  +       I+G+GH++GA   LL G   ++    P + N+ IS++N     A+P            R +  +AAA   S     PS+ D+           ++N V T   L GA L+ E               F+P+P E   L G  Y     +++ F DDS+D + E+ ++LR R     +    L G+H+TP   D+
Sbjct:   57 GSRSRIFKTASGAWVVSPPPGYGPAR------GVVHFLGGAFAGAAPQLLYSLLLDLLAASGYTSVATPYAVTFKHDECAAQVRGSFLAAVDELRASDGTAMLAPANVPILGLGHSMGAHLHLLIGSYNDS----PTATNVLISYNNKQVADAIPIPGLLDALGPSVRFAREQAAAAGLS-ADRMPSAADLLSTASNFLPLQLRNAVDTGGRLSGAGLALEQLYRVAGEVGDGVTAFQPSPAECRQLVGTSYSVPRTLLVRFQDDSIDETPEVEDLLRPRFVRMGMSTLVLPGSHITPCVGDL 348          
BLAST of Ggra7435.t1 vs. uniprot
Match: A0A0M0SRM3 (Uncharacterized protein n=7 Tax=Hapalosiphonaceae TaxID=1892263 RepID=A0A0M0SRM3_9CYAN)

HSP 1 Score: 66.6 bits (161), Expect = 4.270e-9
Identity = 54/191 (28.27%), Postives = 84/191 (43.98%), Query Frame = 0
Query:   94 LIATEIRRISGRQ-LRIVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRDSALPWRPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRTLLGTHLTPMTADI----GADF 279
            L+  E R + G++ L + G+GH++G K  LL G   +  +A     NI ISF+N               AA DA   + +  S+                           +L+ EF P+P ET  L    Y    N+++ F++D++D S  L  +L+ R G + V  + L G HLTP+  D+    G DF
Sbjct:   77 LLRLEDREMLGKKYLPVYGLGHSMGCKLHLLIGSLFQVERA----GNILISFNNY--------------AARDAIPLIEQLNSTFSTFN-------------------FNPNLAVEFTPSPLETQQLIQENYSIRRNLLVKFNNDTIDQSAPLAKLLQQRFG-EMVTTQILQGNHLTPLGQDVKWQTGKDF 229          
BLAST of Ggra7435.t1 vs. uniprot
Match: A0A1Y1HSZ4 (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSZ4_KLENI)

HSP 1 Score: 67.8 bits (164), Expect = 4.590e-9
Identity = 60/219 (27.40%), Postives = 98/219 (44.75%), Query Frame = 0
Query:   89 AGATGLIATEIRRISGRQLRIVGIGHALGAKCLLLA------GCEPEARKACPHSANIFISFDNSTRDSALPW---------------RPSDSKAAADAF-SNVSEFPSSLDVSQVGRP--------DAEKTMKNVVGTVSALGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLRARLGPKSVVRRT--LLGTHLTPMTADI 275
            AG  G   +E++     +L + G+GH+ GA   +L       G  P+A        N+ +SF+N     A+P+               R S  +  A+AF S  + F +S D+   G P        +  + +  V+G ++  G S   EFRPTP ET A+A   Y   S +++ F DD +D +E L   +R  +  +    R   L G H+TP+  ++
Sbjct:  233 AGVPGSTGSELK-----ELPLFGMGHSNGALLHMLTNSLYAEGVRPKA--------NVIMSFNNKPASEAVPYFDQVGPAVAQLAPVLRGSPFQGLAEAFASEATRFAASTDLPIPGLPRENLGPLLEIAQQIAPVIGQITD-GVS---EFRPTPNETRAIAAGGYYVPSTLLIKFTDDGIDETETLAAAIRTGVQSRGGALRIQDLTGNHVTPLIQEV 434          
The following BLAST results are available for this feature:
BLAST of Ggra7435.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFU21.640e-13466.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5871.270e-3034.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
K9XSH46.460e-1230.15Uncharacterized protein n=2 Tax=Stanieria TaxID=10... [more]
A0A0G4EQX95.210e-1129.53Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
DUF1350 family protein n=1 Tax=Geminocystis herdmanii TaxID=669359 RepID=UPI000347AD238.610e-1130.99DUF1350 family protein n=1 Tax=Geminocystis herdma... [more]
A0A0S3TKV74.830e-1029.84Uncharacterized protein n=8 Tax=Fischerella TaxID=... [more]
A0A0D6AM504.990e-1026.52Alpha/beta superfamily hydrolase n=1 Tax=Geminocys... [more]
A0A7R9VMH01.180e-925.74Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A0M0SRM34.270e-928.27Uncharacterized protein n=7 Tax=Hapalosiphonaceae ... [more]
A0A1Y1HSZ44.590e-927.40Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010765Protein of unknown function DUF1350PFAMPF07082DUF1350coord: 101..287
e-value: 1.1E-18
score: 67.4
IPR010765Protein of unknown function DUF1350PANTHERPTHR34127OS04G0405600 PROTEINcoord: 56..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availablePANTHERPTHR34127:SF1OS04G0405600 PROTEINcoord: 56..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:1255081..1256040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7435.t1Ggra7435.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 1255081..1256040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7435.t1 ID=Ggra7435.t1|Name=Ggra7435.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=301bp
MPPLATAAAAAGDRSEVQVFSSDHTSTSPPPPENPSREWQSRPGVDLLLP
DDPGAAFLRRLSEVLTAAIVAYRQSSASADHLDLARKAAGATGLIATEIR
RISGRQLRIVGIGHALGAKCLLLAGCEPEARKACPHSANIFISFDNSTRD
SALPWRPSDSKAAADAFSNVSEFPSSLDVSQVGRPDAEKTMKNVVGTVSA
LGASLSTEFRPTPEETIALAGARYPTLSNVVLSFDDDSLDHSEELGNVLR
ARLGPKSVVRRTLLGTHLTPMTADIGADFRATGFSAVDDGVQKAASRVAK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010765DUF1350