Ggra7414.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7414.t1
Unique Name	Ggra7414.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	84

Homology

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BLAST of Ggra7414.t1 vs. uniprot
Match: A0A2V3IHG0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG0_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 3.960e-35
Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = 0

Query:    1 MKLPKIKLPTIITTRESTGQKEIVGLTPGEWFKSTAALCFLYAVLAGFFAALLVIAQTIRNKGDYYTIPGTDELGIADD 79
            MKLPKIKLPTIITTRE TGQKEIVGLTP EW  ST  LC LYAVLAG+F ALLVIAQ IRN  DY  +PGTD+LGI D+
Sbjct:    1 MKLPKIKLPTIITTREETGQKEIVGLTPKEWVVSTGVLCGLYAVLAGYFTALLVIAQKIRNDRDYLVVPGTDDLGIDDE 79

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BLAST of Ggra7414.t1 vs. uniprot
Match: R7Q4J0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4J0_CHOCR)

HSP 1 Score: 101 bits (251), Expect = 2.110e-26
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 0

Query:    1 MKLPKIKLPTIITTRESTGQKEIVGLTPGEWFKSTAALCFLYAVLAGFFAALLVIAQTIRNKGDYYTIPGTDELGIADD 79
            MK+PK  LP +ITTR+  G+KE +GLTP EW  STA LC LYA+LAGFFA LLVIAQTIRN  D+YTIPG+D+L   D+
Sbjct:    1 MKMPK--LPVLITTRDD-GRKEFIGLTPKEWVVSTAVLCGLYAILAGFFAVLLVIAQTIRNGADFYTIPGSDKLEDDDE 76

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BLAST of Ggra7414.t1 vs. uniprot
Match: A0A1X6P7A5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7A5_PORUM)

HSP 1 Score: 65.5 bits (158), Expect = 2.980e-12
Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0

Query:    3 LPKIKLPTIITTRESTGQKEIVGLTPGEWFKSTAALCFLYAVLAGFFAALLVIAQTIRNKGDYYTIPG 70
            LPK+  P     R   G+ + +GLT  EW  +T AL  LYA+LAGFFA LL+IA  IR+ GD +  PG
Sbjct:    8 LPKLSNPF---QRREDGKMQFIGLTAMEWITTTVALVLLYAILAGFFAVLLIIANKIRHNGDSFERPG 72

The following BLAST results are available for this feature:

BLAST of Ggra7414.t1 vs. uniprot

BLAST of Ggra7414.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A2V3IHG0	3.960e-35	77.22	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q4J0	2.110e-26	65.82	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]
A0A1X6P7A5	2.980e-12	48.53	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..34
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 35..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 57..83
None	No IPR available	TMHMM	TMhelix		coord: 34..56

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000871_pilon	contig	tig00000871_pilon:1035672..1036031 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7414.t1	Ggra7414.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000871_pilon 1035672..1036031 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7414.t1 ID=Ggra7414.t1|Name=Ggra7414.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=84bp
MKLPKIKLPTIITTRESTGQKEIVGLTPGEWFKSTAALCFLYAVLAGFFA
ALLVIAQTIRNKGDYYTIPGTDELGIADDEDDE*