Ggra7407.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7407.t1
Unique NameGgra7407.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1144
Homology
BLAST of Ggra7407.t1 vs. uniprot
Match: A0A2V3IH81 (AUGMIN subunit 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH81_9FLOR)

HSP 1 Score: 930 bits (2403), Expect = 0.000e+0
Identity = 630/1186 (53.12%), Postives = 791/1186 (66.69%), Query Frame = 0
Query:    1 MTPSSFPSPAQLVVENITLLAGSPTAFHARYGFAITASTFEKPAHFNSAAAVLHFLLCIIEQHAVQHLFKPCFPILDRQQERDFKKLVDARLAILERNKLLPHGCARKSIVSSAGGDRFIDLLWSLSSLAVQHACLSHPPYASSNSRLHLQPVHHSYDAASTASSSR------------SQRSLHSFTKSKSPNSSATANPPSSRRFLGMGMVTAAQQRAQNAHHMRARIHAQRAAMARTAHMGKNAALHWNSEAGSLRDKISDFEAKLRCLKMQLTAMGFDENGNDIRGGDAPQLDSARSRPAAPLKAAAAAAINASSPADTLTDELKTSPIDSTESGSSVGDAVESVDGEPLSTDLKRLLMFADETRASREQLCDDL---------DDVPGVNVSDVSAQQIAGLVRAATEELQLATDRMDEIRDARR--EKQSTPAGLHQCLRRQPAVASAALLSAVETRSACPPPLPIAHRSEVDITSSSSTVTDEEKALNNEKEQAAKQLSASEAQLEDGDPTNPLRACVEDALTKHKAVLESSKKLTQEANEFVAKSEAALKLMEPIDSDESVRGNDQHDVT--NSSKPSWFIHASNDAA-IIATQLEKNAKQNSRPDENGNVSSEKDVQQAARLLEKSVASRS--KSSTESTRGRRRKN--GSRSLDCINLMTQSATGSVDLASDNSSAMLCTPSS-TASSTKTARSVRFAELPPSYSATRSGDEAGVVSSGKPGKIRCATEIHPSSAPAPTSTXXXXXXXXXXXASDEPKKLAKQEDRSNSRTTAAVPAVEDSANITRRDASERLTRARTFTEK-TDLQARKDAAGARSRRRDPYVTKNEKGRPATQVTSNRPPRLQRTQTPRRVMRRKDVIERSAIP-QPA--AAKPRPPRRSPPRSASVDDLNKISRSRNRAAFVQADAMSGGRDMAVTSKDVATISKDSAEEQSLNANATTVKFTTNSS--KCSDDEICD----EVRDGGESSQSSVEENVEERQPTPKA-RESVQKKLFMTPEPAGSSSTAVETPGDKLDAVERMYGLRKATGTVKNALTPDNNTVKTSKFEFLQSMTPLPGSGAMNQSGSLSDEDVLFSPATRVPQSQIPNRPKATSSEGFFAGEAAQWQQSVRTQNGTENSMFREGTLTRTTSESTSRRSRFTGMLSS-SSNSGGKKSRVQLLRARLAALNK 1143
            M+  + P+PAQL+VEN+TLLAGSP+AF ARYG  IT +TF KP+ F  AAAVLHFLL +IE   VQ LFKPCFPILDR QERDFKK+VDARL++LE+NKL+P G ARKS+V++AGGDRF+DL+W+LS LAVQHAC+ HPPYA+   R  +       D+AS ASSSR               S      S S ++SAT    +SRRFLG G++ AA  RA NA  MRA + AQR AMART +M +  A   NSEA SLR+KI+DFEAKLRCLKMQL  MGFDENGNDIRGGDAP +++  +  A P  A  A+ +N S+ +DTL DELKTSPI+STESGSS+GDAVESVDGE LS DLKRLL FAD T  +  QLC DL           VPGV V+D SA  I GLVRAATE+L++A  RMD+I  A +   +  T +      RR PA  +A+                + HRS+VDITS+SSTVTDEEKA+N +KE + ++ +  + Q      TNPLRA VE AL KHK VL++S++LT+EANEF AKS+A+LKL+EPIDSD S+ G +   +   N++KPSWFI A+ DA  IIA+Q + + K     D      S  DV+QA++LLE+SVA+ S  KSS+ +   RRRKN   SRS D  N +TQS+T S DL SD++S +LCTPSS T+S+TKTARSVRFAELPPSYSATRSGD+  VV + + GK RC TE++PSS P+  ST             ++ +K  +  D+  SR   A  AV+ +  + +R+ +ER  R +T TEK T+ Q +K+ +  R+RRRD +  K++KGRP  QVTS      QRTQTPRRVMRRKD IERS IP  PA  A+KP+     P RS S  + N ++  R+R+    + + +    +   S        ++ + Q+   + T+ K   ++   + SDDEI      +VRDG ES QSSVEE  EE  PTP A RE+VQKKLFMTPE   S ST VE P +K+D+VE+ YGLRKATGTVK  L+  N     +   FL++ +P         SGSLSD+D+LFSP TRVP SQ P RPKATSS+GFFAGEAA WQQSVR+QNGTE +MF+EG LTRTTSESTSR SR T  LSS SS+SGGK+SRVQ LRARLAALNK
Sbjct:    1 MSTHALPTPAQLIVENLTLLAGSPSAFRARYGHTITDTTFAKPSSFAPAAAVLHFLLSVIEPSVVQPLFKPCFPILDRAQERDFKKVVDARLSLLEKNKLIPQGAARKSVVAAAGGDRFLDLIWTLSCLAVQHACVRHPPYANPT-RFAVSSPPIPDDSASVASSSRXXXXXXXXXXRGKPASARGAAASLSSSASATC---ASRRFLGAGLIAAAHNRANNATTMRATVDAQRLAMARTVNMAQQGATMCNSEADSLREKITDFEAKLRCLKMQLADMGFDENGNDIRGGDAPPVNTTTA--ANPTDAPTASQLNTSASSDTLQDELKTSPIESTESGSSLGDAVESVDGEQLSADLKRLLAFADHTAQNGPQLCHDLAAAERAAQAGQVPGVRVTDASAHDIVGLVRAATEQLEVAAHRMDQISAAAQPHHRDRTNSTTSTRARRGPATLAASXXXXXX----------VTHRSDVDITSASSTVTDEEKAIN-DKEHSIQKTNQKQQQQH---LTNPLRATVEAALRKHKQVLDNSQRLTKEANEFAAKSDASLKLLEPIDSDGSLMGEEVPCIPSPNTTKPSWFIEAAADAERIIASQTQAHQKGRVEHD------SASDVRQASQLLERSVAANSSNKSSSVARSARRRKNDGSSRSFDSFNALTQSSTKSADLESDSASLVLCTPSSSTSSATKTARSVRFAELPPSYSATRSGDDT-VVHASRIGKTRCTTELYPSS-PSSLSTV------------EDVRKSLQDTDKPTSR--GAANAVDTAGVVVKREPAERSARPKTPTEKPTEPQPKKEGSSTRTRRRDQHTPKSDKGRPP-QVTSXXXXXXQRTQTPRRVMRRKDAIERSVIPVAPAVPASKPQAASSIPSRSGSQVNFNGLTECRSRSTVATSTSHAASSLLPNPSSPA----PEAVQTQTPIEDETSKKQLGHADVPQGSDDEISSAINVDVRDGAESLQSSVEELAEEH-PTPLAPRETVQKKLFMTPESTTSFSTPVEPPVEKVDSVEKTYGLRKATGTVKAVLSARNGAT-AANHSFLRNTSPAHARSDSKPSGSLSDDDLLFSPDTRVPLSQKPMRPKATSSDGFFAGEAAHWQQSVRSQNGTEVNMFQEGALTRTTSESTSRFSRLTEKLSSTSSSSGGKRSRVQQLRARLAALNK 1137          
BLAST of Ggra7407.t1 vs. uniprot
Match: A0A7S3DJU9 (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DJU9_9EUKA)

HSP 1 Score: 72.8 bits (177), Expect = 6.720e-10
Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 0
Query:   12 LVVENITLLAGSPTAFHARYGFAITASTFEKPAHFNSAAAVLHFLLCIIEQHAVQHLFKPCFPILDRQQERDFKKLVDARLAILERNKLLPHGCARKSIVSSAGGDRFIDLLWSLS-----SLAVQHACLSHPPYA 142
            ++ +N+TLL         R+G  ++   F KP +  +   ++++LL  +     +  F+  FP +D+ Q+RDF  L  A +  LE+ +LLP GCA +S+ + A G+R   LL+ LS      LA   +  S  PYA
Sbjct:   47 VIRQNLTLLGFDFADQSKRHGVDLSEDCFNKP-NLKAMQVIIYYLLFKLSPEKTEKDFRHSFPAIDKMQQRDFTSLALAEVTRLEKERLLPPGCASRSLFAHAAGERAYFLLFHLSVHVMKELAGDRSSQSRQPYA 181          
BLAST of Ggra7407.t1 vs. uniprot
Match: A0A7S2RR81 (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RR81_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 4.820e-6
Identity = 38/120 (31.67%), Postives = 58/120 (48.33%), Query Frame = 0
Query:   15 ENITLLAGSPTAFHARY--GFAITASTFEKPAHFNSAAAV-LHFLLCIIEQHAVQHLFKPCFPILDRQQERDFKKLVDARLAILERNKLLPHGCARKSIVSSAGGDRFIDLLWSLSSLAV 131
             N+ LL    +  +  Y  G   + S F       SA  V LHFL C ++    + +F   FP+ D  Q R+FK      + +LER K++P G AR S+++ A G     L+W L+  A+
Sbjct:    4 RNLALLGFLSSPEYTGYSDGGVFSESMFSTTTSNESALLVILHFLFCALKPGVARKVFSSVFPVRDHSQRREFKVKAREFMQMLEREKVIPVGTARGSVLNMARGKSACVLVWKLTIAAM 123          
The following BLAST results are available for this feature:
BLAST of Ggra7407.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IH810.000e+053.12AUGMIN subunit 6 n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A7S3DJU96.720e-1031.62Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A7S2RR814.820e-631.67Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 468..488
NoneNo IPR availableCOILSCoilCoilcoord: 387..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1081..1130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 712..735
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 539..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 763..805
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 574..599
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..490
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 808..824
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1081..1129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 688..872
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 931..979
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 574..635
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..331
IPR028163HAUS augmin-like complex subunit 6, N-terminalPFAMPF14661HAUS6_Ncoord: 15..164
e-value: 2.9E-18
score: 66.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:1012651..1016082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7407.t1Ggra7407.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 1012651..1016082 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7407.t1 ID=Ggra7407.t1|Name=Ggra7407.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1144bp
MTPSSFPSPAQLVVENITLLAGSPTAFHARYGFAITASTFEKPAHFNSAA
AVLHFLLCIIEQHAVQHLFKPCFPILDRQQERDFKKLVDARLAILERNKL
LPHGCARKSIVSSAGGDRFIDLLWSLSSLAVQHACLSHPPYASSNSRLHL
QPVHHSYDAASTASSSRSQRSLHSFTKSKSPNSSATANPPSSRRFLGMGM
VTAAQQRAQNAHHMRARIHAQRAAMARTAHMGKNAALHWNSEAGSLRDKI
SDFEAKLRCLKMQLTAMGFDENGNDIRGGDAPQLDSARSRPAAPLKAAAA
AAINASSPADTLTDELKTSPIDSTESGSSVGDAVESVDGEPLSTDLKRLL
MFADETRASREQLCDDLDDVPGVNVSDVSAQQIAGLVRAATEELQLATDR
MDEIRDARREKQSTPAGLHQCLRRQPAVASAALLSAVETRSACPPPLPIA
HRSEVDITSSSSTVTDEEKALNNEKEQAAKQLSASEAQLEDGDPTNPLRA
CVEDALTKHKAVLESSKKLTQEANEFVAKSEAALKLMEPIDSDESVRGND
QHDVTNSSKPSWFIHASNDAAIIATQLEKNAKQNSRPDENGNVSSEKDVQ
QAARLLEKSVASRSKSSTESTRGRRRKNGSRSLDCINLMTQSATGSVDLA
SDNSSAMLCTPSSTASSTKTARSVRFAELPPSYSATRSGDEAGVVSSGKP
GKIRCATEIHPSSAPAPTSTTAASSSSSTSVASDEPKKLAKQEDRSNSRT
TAAVPAVEDSANITRRDASERLTRARTFTEKTDLQARKDAAGARSRRRDP
YVTKNEKGRPATQVTSNRPPRLQRTQTPRRVMRRKDVIERSAIPQPAAAK
PRPPRRSPPRSASVDDLNKISRSRNRAAFVQADAMSGGRDMAVTSKDVAT
ISKDSAEEQSLNANATTVKFTTNSSKCSDDEICDEVRDGGESSQSSVEEN
VEERQPTPKARESVQKKLFMTPEPAGSSSTAVETPGDKLDAVERMYGLRK
ATGTVKNALTPDNNTVKTSKFEFLQSMTPLPGSGAMNQSGSLSDEDVLFS
PATRVPQSQIPNRPKATSSEGFFAGEAAQWQQSVRTQNGTENSMFREGTL
TRTTSESTSRRSRFTGMLSSSSNSGGKKSRVQLLRARLAALNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028163HAUS_6_N