Ggra7406.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7406.t1
Unique NameGgra7406.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length995
Homology
BLAST of Ggra7406.t1 vs. uniprot
Match: A0A2V3IHF1 (BTB domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF1_9FLOR)

HSP 1 Score: 323 bits (827), Expect = 2.040e-96
Identity = 179/458 (39.08%), Postives = 258/458 (56.33%), Query Frame = 0
Query:   15 WDIQQDTLYPSRKCLEQKCEQFAQAQHNDSLVRFEFADSGES-RTFLTIHRSVLIASGGALKNLVSCGFKEATSNTVVVHDSFEVWQVIRRYLYCLPFNLTKVNAELVMVAHRYEMTELMFACFLWVQLSRKWNGSELVCEWLGVVTVIQPPIQFCKFFALHFCLCFEAISERLGALNWKIGYQNVWKSLCSWGMLGACVKYITYTSKEDQSRLLLDMLFSHVESEASDEELGDMLSCFDWESSAFAEALQSEQGHRWPQRAWRLLCLNARSALVEQGVDVRARFRVLASSIEPRTACCYQKFERSVAHESGAIHVVMRV-YTAGGGSEEGAGAHALLLYVEVRC-SANKPLREHAVSGSIYLTGEACACAVCTQPPLPLTERLARVQGDARSFRRGKRVQLLDARALSSELRARCRACGWVIGARLSKHKSKFHTSRTYSCLAEACTSPAFQTFSEL 469
            W + +  L+P  + L+++C  FA   +ND LV FEF  +G S +  + IHRS+L+++GGAL+ LV+ GFKE +S TV +HDSF+VW++IR YLY  P ++  V  E VMVAHRYE+ EL  ACFLW+++S  W G +LV +WL VV+++QPP  FC++FAL F L F+++ ++L   NWK G QN+W S  S GM  ACVKYIT TS +D + +LLD LF+ VE EASDE++  +L  FDW S++F  AL S    +W  R+WR L LN++    +   D+R R RV    +     C Y+    S   E G ++  +RV Y      E         + V VR  S ++ +R + V+G+++L  E CAC V         E           F+ G  V  +    L+ E    C  C WV+G R+   + +  +  T     + C  P    FSEL
Sbjct:   23 WHLYRGKLHPRTEALKRQCHLFADVGNNDFLVTFEFPGNGGSPKKEMYIHRSLLVSTGGALRTLVTSGFKECSSKTVTLHDSFDVWKLIRTYLYRQPVDMRDVTTETVMVAHRYELVELFCACFLWIEVSGIWKGKDLVEDWLEVVSLVQPPRAFCEYFALQFSLSFDSVVKKLEKCNWKEGTQNIWVSFFSKGMFAACVKYITRTSAKDYTFILLDALFTDVEREASDEQIKHVLDFFDWRSASFNNALSSVAALKWSPRSWRALALNSQKTAAKSSFDMRVRCRVPIRILRDNCVCTYKGRYLSSNDEVGTVNASIRVVYLIVHHDELDERGDLGPMMVTVRINSKHRNVRAYYVTGNVFLIREPCACRVSEHKDFKFMEGEDSFCDRMHKFKYGISVTFMMVEELTRENAHSCEKCMWVVGVRMRFTRIEKASDPTSHW--KGCEEPDEFEFSEL 478          
BLAST of Ggra7406.t1 vs. uniprot
Match: A0A2V3IH80 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH80_9FLOR)

HSP 1 Score: 214 bits (544), Expect = 6.600e-58
Identity = 156/391 (39.90%), Postives = 224/391 (57.29%), Query Frame = 0
Query:  614 MVLDSPLHPQSIQRANFVSDRHAPLAHINAAANANHAYIERDKLVSISAQPPPPCVSVSIPPHSAPYAVAQQQSKQALVGDQTNVSQAPPISGLRMGLGLEARSFEDRM--QPEGSVQQAINSLHSNASFPTSETSPARKRRCLNSGVSVPSTAALRGKLSHEVMQINSNNMNSYGPFNNSLRAYENGGQPGLRAHGRMDKNENVRHDVSPSAISTLFSQDEDTPAVSS-----QTCVMNYGRLQGIEAQTGDRHSFLDPRHRYAHQERPSQGEPNEANELVYRAHTQTTSGFANQSKMPPLALGTSNPSLHDLFVNNNAPVETYYGN-SRDLIPQDPVPAN-SSIPESAVAQRGTI-TESREHAPTQLANTSENRSVERLGYRAMTTARA 994
            M L+ PL  Q  Q A +  DR A +A +      + +Y  R+        PPP   S+ +P +S P+A+ Q  SK  LVG+Q + SQ+  I GLR  L ++ R F++R+  QP   VQQ  ++L +NA+F T   SP  KRRCL+  +   +T  LRGK   +++QIN+N++ S+   N S R +E+ GQP LR     DK  + + DVSPSAISTLF+ DE +   S      Q  +MN+GR++G+      R + +  + ++   +R  +GE ++ NEL+YR   Q T  F +QSKMP L L TS   L DLFV+ N  V+ YYG  +R  IPQDP P   +++ E   AQR    +++R  A  QL NTSE ++V+RLG R M TARA
Sbjct:    1 MDLNEPLDSQQNQHA-YEHDRSALVAPVTGECPPHESYAPRE-------HPPPNPASMGVPTNSNPFAMVQG-SKGELVGEQQSSSQSIRIPGLRPNLDVDNRVFDERLNTQPGRGVQQQPSALPTNATFQT-HMSPVAKRRCLSPPLPCRATN-LRGKTPTDILQINTNHLQSFAHDNMSFRGWESTGQPALRMSSPPDKYGS-KADVSPSAISTLFATDEASREGSFRQSAIQRNLMNFGRVEGVPNAASGRSTMMRQQTKFGDLQRRVEGEASDVNELMYRV--QATPTFGSQSKMPALPLETSTSGLPDLFVSTNGQVDAYYGGETRQFIPQDPGPVTGNAVAEQIHAQRNASHSDARASATAQLLNTSETKNVDRLGIRIM-TARA 376          
BLAST of Ggra7406.t1 vs. uniprot
Match: A0A553P7B8 (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P7B8_TIGCA)

HSP 1 Score: 65.9 bits (159), Expect = 3.050e-7
Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = 0
Query:  426 RCRACGWV-IGARLSKHKSKFHTSRTYSCLAEACTSPAFQTFSELTHHVRANHAPRKLFECKICARQVRSAPALARHVAACQTGALTREHRCGYPD--CGAVYSSSGNLGTHIRSKHTNPGGFGCDACNKRFSLKSSMERHRRTIHADHKHECFMCK---ATLFGDE-QLRTHMLENH 596
            +C  C ++ I A +++H++K H  +T+ C  + C + + +  ++  +HV+  H P K   CK C  +      L  H         T+ H   +P   CG V+S++  L THI   H  P  F CD C + F LK++M RH+ ++H   K+  F+C+      + DE  LRTH  + H
Sbjct:  442 KCEDCEFIGIEAEVTEHRTKQH--QTFIC--DVCATVS-KNLAKHKNHVK-KHVPIK---CKDCPEEFIGKANLLEH--------RTKVHGDRFPCKWCGKVFSATWKLKTHITGAHATPR-FMCDLCGQEFRLKTTMYRHKISVHI--KNRPFVCRYGCGADYNDECNLRTHEKKTH 599          
BLAST of Ggra7406.t1 vs. uniprot
Match: R7UZM4 (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UZM4_CAPTE)

HSP 1 Score: 62.0 bits (149), Expect = 3.440e-6
Identity = 51/177 (28.81%), Postives = 78/177 (44.07%), Query Frame = 0
Query:  427 CRACGWVIGA--RLSKHKSKFHTSRTYSCLAEACTSPAFQTFSELTHHVRANHAPRKLFECKICARQVRSAPALARHVAA-CQTGALTREHRCGYPDCGAVYSSSGNLGTHIRSKHTNPGGFGCDACNKRFSLKSSMERHRRTIHADHK-HECFMCKATLFGDEQLRTHMLENHHVH 599
            C+ C    G+   L +H    +  R Y C    C     +  + L  H+   H+ RKLF C+ C  +++   +   H+    Q  A T EH      CG  + ++  L TH +  H  P    C+ C+KRFS ++S++RH R +H D K  +C  C  +      LR H    H  H
Sbjct:  222 CKICKKSFGSMFNLREHSKTHNKKRVYQC--PHCKHSTHRE-ALLKTHINNCHSERKLFACEFCDAKLKFRQSYDEHLLRHFQAPAKTCEH------CGKAFYTASALATH-KVIHKPPS-LECNVCHKRFSHRTSLQRHLR-LHDDRKTFKCSFCSHSCKDVSNLRKHERNMHQSH 386          
The following BLAST results are available for this feature:
BLAST of Ggra7406.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IHF12.040e-9639.08BTB domain-containing protein n=1 Tax=Gracilariops... [more]
A0A2V3IH806.600e-5839.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A553P7B83.050e-730.34Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
R7UZM43.440e-628.81Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 451..477
e-value: 36.0
score: 8.3
coord: 573..596
e-value: 5.8
score: 15.4
coord: 514..539
e-value: 0.028
score: 23.6
coord: 483..503
e-value: 52.0
score: 7.0
coord: 545..568
e-value: 0.026
score: 23.7
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 514..539
e-value: 0.014
score: 15.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 547..568
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 575..597
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 545..573
score: 12.777765
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 514..544
score: 9.390121
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 515..540
e-value: 2.4E-5
score: 26.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 433..509
e-value: 2.6E-5
score: 26.0
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 541..599
e-value: 9.1E-7
score: 30.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 943..994
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 858..882
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 860..876
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 946..981
NoneNo IPR availablePANTHERPTHR24379KRAB AND ZINC FINGER DOMAIN-CONTAININGcoord: 426..601
NoneNo IPR availablePANTHERPTHR24379:SF67BLOODY FINGERS-RELATEDcoord: 426..601
IPR011333SKP1/BTB/POZ domain superfamilyGENE3D3.30.710.10Potassium Channel Kv1.1; Chain Acoord: 21..143
e-value: 9.1E-9
score: 37.4
IPR011333SKP1/BTB/POZ domain superfamilySUPERFAMILY54695POZ domaincoord: 59..137
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 518..566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:1008461..1012430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7406.t1Ggra7406.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 1008461..1012430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7406.t1 ID=Ggra7406.t1|Name=Ggra7406.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=995bp
MERQTERFSCCGELWDIQQDTLYPSRKCLEQKCEQFAQAQHNDSLVRFEF
ADSGESRTFLTIHRSVLIASGGALKNLVSCGFKEATSNTVVVHDSFEVWQ
VIRRYLYCLPFNLTKVNAELVMVAHRYEMTELMFACFLWVQLSRKWNGSE
LVCEWLGVVTVIQPPIQFCKFFALHFCLCFEAISERLGALNWKIGYQNVW
KSLCSWGMLGACVKYITYTSKEDQSRLLLDMLFSHVESEASDEELGDMLS
CFDWESSAFAEALQSEQGHRWPQRAWRLLCLNARSALVEQGVDVRARFRV
LASSIEPRTACCYQKFERSVAHESGAIHVVMRVYTAGGGSEEGAGAHALL
LYVEVRCSANKPLREHAVSGSIYLTGEACACAVCTQPPLPLTERLARVQG
DARSFRRGKRVQLLDARALSSELRARCRACGWVIGARLSKHKSKFHTSRT
YSCLAEACTSPAFQTFSELTHHVRANHAPRKLFECKICARQVRSAPALAR
HVAACQTGALTREHRCGYPDCGAVYSSSGNLGTHIRSKHTNPGGFGCDAC
NKRFSLKSSMERHRRTIHADHKHECFMCKATLFGDEQLRTHMLENHHVHQ
PTSPVPSVLNKPPMVLDSPLHPQSIQRANFVSDRHAPLAHINAAANANHA
YIERDKLVSISAQPPPPCVSVSIPPHSAPYAVAQQQSKQALVGDQTNVSQ
APPISGLRMGLGLEARSFEDRMQPEGSVQQAINSLHSNASFPTSETSPAR
KRRCLNSGVSVPSTAALRGKLSHEVMQINSNNMNSYGPFNNSLRAYENGG
QPGLRAHGRMDKNENVRHDVSPSAISTLFSQDEDTPAVSSQTCVMNYGRL
QGIEAQTGDRHSFLDPRHRYAHQERPSQGEPNEANELVYRAHTQTTSGFA
NQSKMPPLALGTSNPSLHDLFVNNNAPVETYYGNSRDLIPQDPVPANSSI
PESAVAQRGTITESREHAPTQLANTSENRSVERLGYRAMTTARA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR011333SKP1/BTB/POZ_sf
IPR036236Znf_C2H2_sf