Ggra7394.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7394.t1
Unique NameGgra7394.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length142
Homology
BLAST of Ggra7394.t1 vs. uniprot
Match: A0A2V3IID0 (Trafficking protein particle complex subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IID0_9FLOR)

HSP 1 Score: 271 bits (693), Expect = 5.820e-92
Identity = 124/141 (87.94%), Postives = 136/141 (96.45%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDEKNMFGMLFALRNFAMKLSPDAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            MAVYCFYLFDRTGTCLCY+EW RSRS+QD SDD+KNMFGMLFALRNF++KLSPD AKG+P+FFVTDVYALHYFETPTGLRFVL TSHDCGSVDVTRHL+DIYAEVYVEYA+KNPLYV+G+KI+ ELFLSKLDSYVRSLPCF
Sbjct:    1 MAVYCFYLFDRTGTCLCYYEWNRSRSLQDASDDQKNMFGMLFALRNFSVKLSPDPAKGVPTFFVTDVYALHYFETPTGLRFVLITSHDCGSVDVTRHLTDIYAEVYVEYAIKNPLYVKGSKIDYELFLSKLDSYVRSLPCF 141          
BLAST of Ggra7394.t1 vs. uniprot
Match: R7Q1R5 (Trafficking protein particle complex subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q1R5_CHOCR)

HSP 1 Score: 226 bits (575), Expect = 5.700e-74
Identity = 105/141 (74.47%), Postives = 120/141 (85.11%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDEKNMFGMLFALRNFAMKLSPDAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            MAV+ FYLFDRTGTCLCY EWQR+R  QD SDD KNMFGMLFALRNF++KLSPDA +GIPSFFVTDVYALHYFET TGLRFVL TS+D   VDVT  LS+IY  V+VEY VKNPLY +G  I+S+LF++KLD Y+R+LPCF
Sbjct:    1 MAVFSFYLFDRTGTCLCYHEWQRTRQPQDMSDDHKNMFGMLFALRNFSIKLSPDAERGIPSFFVTDVYALHYFETATGLRFVLNTSNDFKGVDVTHALSEIYNSVFVEYVVKNPLYTRGNVIKSDLFITKLDDYIRALPCF 141          
BLAST of Ggra7394.t1 vs. uniprot
Match: A0A1X6NL35 (Trafficking protein particle complex subunit n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL35_PORUM)

HSP 1 Score: 181 bits (459), Expect = 2.660e-56
Identity = 84/141 (59.57%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDEKNMFGMLFALRNFAMKLSPDAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            MAVYCFYLFDR G  LCY EW R+R      DD K+MFG+LFALRNF  KLSP    G P +++T+ YALH+ ETPTGLRF+L TS D G  D++R L D+YA+ YV Y VKNPL V+G  I    FL +LDSYVR+L CF
Sbjct:    1 MAVYCFYLFDRAGRLLCYREWSRARRTHAGEDDAKSMFGLLFALRNFCSKLSPSPLGGSPKYYITETYALHHHETPTGLRFLLLTSPDFGGADISRDLRDLYADAYVPYVVKNPLSVRGEVIRVPAFLGRLDSYVRNLSCF 141          
BLAST of Ggra7394.t1 vs. uniprot
Match: M2Y3T3 (Trafficking protein particle complex subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y3T3_GALSU)

HSP 1 Score: 166 bits (419), Expect = 4.170e-50
Identity = 80/141 (56.74%), Postives = 100/141 (70.92%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDEKNMFGMLFALRNFAMKLSPDAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            M VY FYLFDR G CLCY EW R + ++D + D+KN FG+LFAL+NF  KLSP    G    + TDVY+LHYFE+PTGLRFVL TS   GS D++  L DIY  VYV+   +NPLYV G  I+S+LF SKLD+ +++L CF
Sbjct:    1 MTVYAFYLFDRQGNCLCYREWSRPKLMKDATQDQKNTFGVLFALKNFCKKLSPRQPGGQLKNYSTDVYSLHYFESPTGLRFVLLTSR--GSGDLSGVLRDIYLNVYVDTVTRNPLYVPGESIQSQLFFSKLDTAIKALACF 139          
BLAST of Ggra7394.t1 vs. uniprot
Match: A0A5J4Z4Q3 (Trafficking protein particle complex subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Q3_PORPP)

HSP 1 Score: 148 bits (373), Expect = 4.890e-43
Identity = 74/154 (48.05%), Postives = 99/154 (64.29%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDEKNMFGMLFALRNFAMKLSPDAA-----KGIPS--------FFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            M VYC Y+F+R G CL Y  ++R+ + +D  D++KNM+GMLFA+RNF  K+SP  A     KG+          ++V   YALHYFETPTGLRF++TT       DV + L  I+A +YVEY V N LY  G  I+S LFL KLD+YV++LP +
Sbjct:    1 MTVYCLYIFNRYGECLLYRVYKRTYAPRDPGDEQKNMYGMLFAMRNFCQKMSPAQAAESDGKGLTQREVQAHLQYYVAGNYALHYFETPTGLRFIMTTGTQFTGFDVNQCLRRIHARLYVEYVVSNALYTPGEPIQSALFLEKLDAYVKALPIY 154          
BLAST of Ggra7394.t1 vs. uniprot
Match: trafficking protein particle complex subunit 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255CA5 (trafficking protein particle complex subunit 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255CA5)

HSP 1 Score: 137 bits (345), Expect = 6.040e-39
Identity = 70/143 (48.95%), Postives = 98/143 (68.53%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEW-QRSRSVQDKSDDEKNMFGMLFALRNFAMKLSP-DAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            M +Y  Y+FDR GTCLCY EW +R +S   K ++ K M+GMLF++++F  ++SP D   G  SF  T+ Y LH++ETP+GLRFV+ TS + G +     L  IY+ +YVEY VKNP+      IESE+FLSKLDS++R+LP +
Sbjct:    1 MTIYNLYIFDRNGTCLCYQEWIRRKQSGITKDEEYKLMYGMLFSIKSFINRISPVDTKDGFLSF-STNSYKLHFYETPSGLRFVINTSLNVGCL--REVLQQIYSNIYVEYVVKNPMCELDKAIESEIFLSKLDSFIRNLPAY 140          
BLAST of Ggra7394.t1 vs. uniprot
Match: trafficking protein particle complex subunit 1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF992C1 (trafficking protein particle complex subunit 1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF992C1)

HSP 1 Score: 136 bits (343), Expect = 1.290e-38
Identity = 72/143 (50.35%), Postives = 94/143 (65.73%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQ-DKSDDEKNMFGMLFALRNFAMKLSP-DAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            M V+  ++FDR GTCL Y EW R +     K ++ K MFGMLF++R+F  K+SP D  +G  SF  T  Y LHY+ETPTGL+FVL T  D G  ++   L  IY+ +YVEY VKNPL  Q   I+SELF +KLD+++R LP F
Sbjct:    1 MTVHNLFIFDRNGTCLHYSEWNRKKQAGISKEEEYKLMFGMLFSIRSFVGKMSPVDMKEGFLSF-QTSKYKLHYYETPTGLKFVLNT--DLGVQNIRDILHQIYSNIYVEYVVKNPLCAQNEPIQSELFRTKLDNFIRGLPFF 140          
BLAST of Ggra7394.t1 vs. uniprot
Match: A0A6P4Y999 (Trafficking protein particle complex subunit n=2 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y999_BRABE)

HSP 1 Score: 134 bits (336), Expect = 1.490e-37
Identity = 68/142 (47.89%), Postives = 93/142 (65.49%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDE-KNMFGMLFALRNFAMKLSPDAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            M V+  Y+FDR GTCL Y EW R +      ++E K M+GMLF++++F  +LSP   K     + T+ Y LH++ETP+GL+FV+ T    G++  T H   IY+ +YVEY VKNPLY  G  IESELF +KLD++VR LP F
Sbjct:    1 MTVFNLYIFDRNGTCLHYSEWNRKKQPGMSREEEFKLMYGMLFSIKSFISRLSPTDYKDGFLNYQTNKYKLHFYETPSGLKFVMNTDLAAGNMRETLH--QIYSSIYVEYVVKNPLYELGQPIESELFKAKLDNFVRGLPMF 140          
BLAST of Ggra7394.t1 vs. uniprot
Match: R7T5S0 (Trafficking protein particle complex subunit n=1 Tax=Capitella teleta TaxID=283909 RepID=R7T5S0_CAPTE)

HSP 1 Score: 133 bits (335), Expect = 2.110e-37
Identity = 68/142 (47.89%), Postives = 96/142 (67.61%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEW-QRSRSVQDKSDDEKNMFGMLFALRNFAMKLSPDAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            M VY  Y+FDR GTCL Y EW +R++S   K+++ K M+GMLF++++F  ++SP   K       T+ + LH++ETP+GL+FVL T    G++  T H   IY+ +Y+EY +KNPL VQG  IESELF +KLD +VR LP F
Sbjct:    1 MTVYNLYIFDREGTCLYYHEWNRRNQSGICKTEEYKLMYGMLFSIKSFCSRMSPIDQKDGFMNLRTNKFKLHFYETPSGLKFVLNTDLSVGNIRDTLH--QIYSSIYLEYVMKNPLCVQGDVIESELFQTKLDDFVRGLPIF 140          
BLAST of Ggra7394.t1 vs. uniprot
Match: A0A6A5DUP5 (Trafficking protein particle complex subunit n=4 Tax=Perciformes TaxID=8111 RepID=A0A6A5DUP5_PERFL)

HSP 1 Score: 133 bits (335), Expect = 2.760e-37
Identity = 70/143 (48.95%), Postives = 94/143 (65.73%), Query Frame = 0
Query:    1 MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDE-KNMFGMLFALRNFAMKLSP-DAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSDIYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF 141
            M V+  Y+FDR G+CL Y EW R +      D+E K M+GMLF++R+F  K+SP D  +G  SF  T  Y LHY+ETP+GLRFV+ T  D    +    L  IY+ +YVEY VKNP+ V G  ++SELF S+LDSY+R+LP +
Sbjct:   10 MTVHNLYIFDRNGSCLYYNEWNRKKQAGISKDEEFKLMYGMLFSIRSFVSKMSPLDMKEGFLSF-QTSKYRLHYYETPSGLRFVMNT--DLSVPNARDTLQHIYSNLYVEYIVKNPVCVLGQSLDSELFSSRLDSYIRALPYY 149          
The following BLAST results are available for this feature:
BLAST of Ggra7394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IID05.820e-9287.94Trafficking protein particle complex subunit n=1 T... [more]
R7Q1R55.700e-7474.47Trafficking protein particle complex subunit n=1 T... [more]
A0A1X6NL352.660e-5659.57Trafficking protein particle complex subunit n=1 T... [more]
M2Y3T34.170e-5056.74Trafficking protein particle complex subunit n=1 T... [more]
A0A5J4Z4Q34.890e-4348.05Trafficking protein particle complex subunit n=1 T... [more]
trafficking protein particle complex subunit 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255CA56.040e-3948.95trafficking protein particle complex subunit 1-lik... [more]
trafficking protein particle complex subunit 1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF992C11.290e-3850.35trafficking protein particle complex subunit 1 n=1... [more]
A0A6P4Y9991.490e-3747.89Trafficking protein particle complex subunit n=2 T... [more]
R7T5S02.110e-3747.89Trafficking protein particle complex subunit n=1 T... [more]
A0A6A5DUP52.760e-3748.95Trafficking protein particle complex subunit n=4 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007233Trafficking protein particle complex subunitSMARTSM01399Sybindin_2coord: 3..138
e-value: 8.2E-42
score: 154.9
IPR007233Trafficking protein particle complex subunitPFAMPF04099Sybindincoord: 3..137
e-value: 8.5E-32
score: 110.1
IPR007233Trafficking protein particle complex subunitPANTHERPTHR23249TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNITcoord: 3..139
NoneNo IPR availableGENE3D3.30.450.70coord: 1..141
e-value: 1.7E-40
score: 140.3
NoneNo IPR availablePANTHERPTHR23249:SF16TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1coord: 3..139
NoneNo IPR availableCDDcd14855TRAPPC1_MUM2coord: 4..134
e-value: 9.43323E-61
score: 181.591
IPR011012Longin-like domain superfamilySUPERFAMILY64356SNARE-likecoord: 1..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:974383..974808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7394.t1Ggra7394.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 974383..974808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7394.t1 ID=Ggra7394.t1|Name=Ggra7394.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=142bp
MAVYCFYLFDRTGTCLCYFEWQRSRSVQDKSDDEKNMFGMLFALRNFAMK
LSPDAAKGIPSFFVTDVYALHYFETPTGLRFVLTTSHDCGSVDVTRHLSD
IYAEVYVEYAVKNPLYVQGTKIESELFLSKLDSYVRSLPCF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007233TRAPPC
IPR011012Longin-like_dom_sf