Ggra7390.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7390.t1
Unique NameGgra7390.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length508
Homology
BLAST of Ggra7390.t1 vs. uniprot
Match: A0A2V3IBS2 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBS2_9FLOR)

HSP 1 Score: 633 bits (1632), Expect = 1.330e-222
Identity = 336/491 (68.43%), Postives = 380/491 (77.39%), Query Frame = 0
Query:   24 STRDPPSPPTRSLSQPSSSRLLSSRVFRRRVNLDSADVTRLSTNSRHSDVFPAQRLHAFEPYHPSSPPDSGRVSSAITVTPPASFDAASAPSSALLSMHP-----WRKPAAFRRKHHTHAAQPPPA-DQVFGVAEQKEDRHPREDGEQVLVKFLRSTLGPKAQGIAVRLVNKTPLTSQSTFTYVISQGSEDEGVDIMRAQLMSGRLFAAGMRYAATAWANLLLGDRFYVTNNRQRHELVYRRATCTCIICKVRATERPRTVDQAES-SSLRDDVSTMSVAPPFTRTPSHSAMANFVVRYRLPDKAALSRIGASSSFRELEIGTVVRLNYRASAKLKLTDDVKELLGHLAYTGPISHEDMYRKVTTIGVHYYLYNKGKKERKVFIQGELVRLPINVGVIKLGTQPMYMPELGATFCLHRKQIMSIYVGEIVLEGNAVGSFINTGIHYYIGFGEERGVCPVYPNKTLGKARKLGINELLLHHHMVDDLEVRCI 507
            STRDPPSPP RS S PSSS   + +  + R +                    AQRLH  EP+HPSS  DS  ++S  T+TPP S DA S P +            WRKP  FRRKH ++ AQP    D VFG AEQ EDR P  DGEQ+L++ LR++LGPKAQ IAVRL NKTPLTS STF+Y+I QGSEDE VDI+R QL+SGRL+  GMR+AATAWANLLLGDRF+  N+RQRHELVYRR+TCTCIIC+VR+ + P +        ++ D+ ST+SV P   RTPSHSAMANFVVRYRLP    L RIGASSS + LEIG+VVRLNYRASAKLKLTD+V+EL GHLAYTGPISHED+YRKVTTIGVHYYLYNKGKKERKV+IQG LVRLPINVGVIKLGTQPMYMPELGA +CLHRKQIMS+YVGEIVLEGN+  SFI TGIH+YIGFGEERGVCPVYPNKTLGKARKLGINELLLHHHMVDDLEV+CI
Sbjct:   47 STRDPPSPPLRSSSHPSSS-YPARKTSKHRSSSXXXXXXXXXXXXXXXXXXXAQRLHPIEPHHPSSFADSRGLAS--TITPPHSIDAPSPPPTXXXXXXXXFSPLWRKPPVFRRKHPSNMAQPAATIDPVFG-AEQTEDRPPHSDGEQMLIRLLRTSLGPKAQAIAVRLANKTPLTSPSTFSYLICQGSEDEDVDIVRRQLVSGRLYPDGMRFAATAWANLLLGDRFFAANSRQRHELVYRRSTCTCIICRVRSAQPPSSASTPPHLPAVSDEESTVSVQPTIVRTPSHSAMANFVVRYRLPSIEQLERIGASSSSKVLEIGSVVRLNYRASAKLKLTDEVRELFGHLAYTGPISHEDVYRKVTTIGVHYYLYNKGKKERKVYIQGHLVRLPINVGVIKLGTQPMYMPELGAYYCLHRKQIMSVYVGEIVLEGNSFSSFIKTGIHFYIGFGEERGVCPVYPNKTLGKARKLGINELLLHHHMVDDLEVKCI 533          
BLAST of Ggra7390.t1 vs. uniprot
Match: R7QSL7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSL7_CHOCR)

HSP 1 Score: 468 bits (1204), Expect = 8.660e-161
Identity = 233/333 (69.97%), Postives = 271/333 (81.38%), Query Frame = 0
Query:  187 VNKTPLTSQSTFTYVISQGSEDEGVDIMRAQLMSGRLFAAGMRYAATAWANLLLGDRFYV-TNNRQRHELVYRRATCTCIICKVRATE-----------RPRTVDQAESSSLRDDVSTMSVAPPFTRTPSHSAMANFVVRYRLPDKAALSRIGASSSFRELEIGTVVRLNYRASAKLKLTDDVKELLGHLAYTGPISHEDMYRKVTTIGVHYYLYNKGKKERKVFIQGELVRLPINVGVIKLGTQPMYMPELGATFCLHRKQIMSIYVGEIVLEGNAVGSFINTGIHYYIGFGEERGVCPVYPNKTLGKARKLGINELLLHHHMVDDLEVRCI 507
            +NKTP+T+ + F+YVI Q +ED  +DI+R  L SGRL+ AG+R  A AW NLLLGDRF   T+ RQRHEL YRR++C+CI+C+VR TE           R +T +   +    + +STMS A   +RTP+HSAMANFVV+ RLP   AL  IGASSS RELEIG+VVRLNYRASAK K T++V EL GHLAYTGPISHE++YR+VTTIGVHYYLYNKGKKERKV+IQG+L+RLP+ VGV+KLGTQPMY  ELGATFCLHRKQIMSIYVGEIVLEGN++GSFI TGI YYIGFGEERGVCPVYPNK LGKARKLGINELLLHHHMVDDLEVRC+
Sbjct:    1 MNKTPITTGAAFSYVIHQATEDSDLDIIRRDLSSGRLYQAGVRMVAGAWCNLLLGDRFQPGTHPRQRHELTYRRSSCSCILCRVRLTELVDQQMQASSTREQTSETTSTGLSAELLSTMSSA---SRTPTHSAMANFVVKCRLPSNEALRSIGASSSSRELEIGSVVRLNYRASAKFKFTEEVSELFGHLAYTGPISHEEVYRRVTTIGVHYYLYNKGKKERKVYIQGQLIRLPVQVGVVKLGTQPMYFDELGATFCLHRKQIMSIYVGEIVLEGNSLGSFIKTGIRYYIGFGEERGVCPVYPNKALGKARKLGINELLLHHHMVDDLEVRCL 330          
BLAST of Ggra7390.t1 vs. uniprot
Match: A0A2V3IQJ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ0_9FLOR)

HSP 1 Score: 401 bits (1030), Expect = 2.490e-133
Identity = 191/357 (53.50%), Postives = 265/357 (74.23%), Query Frame = 0
Query:  150 VAEQKEDRHPREDGEQVLVKFLRSTLGPKAQGIAVRLVNKTPLTSQSTFTYVISQGSEDEGVDIMRAQLMSGRLFAAGMRYAATAWANLLLGDRFYV-TNNRQRHELVYRRATCTCIICKVRATERPRTVDQAESSSLRDDVSTMSVAPPFTRTPSHSAMANFVVRYRLPDKAALSRIGASSSFRELEIGTVVRLNYRASAKLKLTDDVKELLGHLAYTGPISHEDMYRKVTTIGVHYYLYNKGKKERKVFIQGELVRLPINVGVIKLGTQPMYMPELGATFCLHRKQIMSIYVGEIVLEGNAVGSFINTGIHYYIGFGEERGVCPVYPNKTLGKARKLGINELLLHHHMVDDLEVR 505
              +QK+    RE+GEQ+L+ F+R+ LG +A+G+A+RL+NK P+   S F+Y I+Q +E+  + I+   L+SGRL+ +G +Y A  WANLL GD+F   TN RQ HEL Y R +CTC++C +         +      L DD  + S +   +  P +SAMANFV  Y +P    L +IG  +S+RELEIGT+VRLN RA+AKL+ T+D+K+L  HL+Y+GPISHE +YRKVTT+GV+YYLYNKGKKERKV++QG+LV++P+ +GV+KLGT P+Y+ E+GA + L+++Q+M IYVGE+VLEGN+ GSFI TGI Y++G GE+ G CPVY NK+LGK R+LG+NELLLHHHMVDDL++R
Sbjct:   50 AVKQKQGASVRENGEQLLLSFIRNRLGLQAEGLAIRLMNKNPIKDGSVFSYEINQTTEESDLQIICRDLLSGRLYRSGAKYVAPQWANLLFGDKFASSTNRRQVHELTYVRTSCTCLVCLINMESMS---ENKTGVPLDDDTKSFS-STTSSYVPENSAMANFVRPYPIPSANDLKKIGGLASWRELEIGTIVRLNSRAAAKLRFTEDMKQLFAHLSYSGPISHEALYRKVTTMGVNYYLYNKGKKERKVYLQGDLVQVPLEMGVVKLGTSPLYLEEVGAYYILYKRQVMKIYVGELVLEGNSFGSFIPTGIKYFVGIGEDGGCCPVYSNKSLGKPRRLGLNELLLHHHMVDDLKIR 402          
The following BLAST results are available for this feature:
BLAST of Ggra7390.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IBS21.330e-22268.43Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
R7QSL78.660e-16169.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IQJ02.490e-13353.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:955167..956690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7390.t1Ggra7390.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 955167..956690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7390.t1 ID=Ggra7390.t1|Name=Ggra7390.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=508bp
MSSESSSIPYHAAPVALLSTPTASTRDPPSPPTRSLSQPSSSRLLSSRVF
RRRVNLDSADVTRLSTNSRHSDVFPAQRLHAFEPYHPSSPPDSGRVSSAI
TVTPPASFDAASAPSSALLSMHPWRKPAAFRRKHHTHAAQPPPADQVFGV
AEQKEDRHPREDGEQVLVKFLRSTLGPKAQGIAVRLVNKTPLTSQSTFTY
VISQGSEDEGVDIMRAQLMSGRLFAAGMRYAATAWANLLLGDRFYVTNNR
QRHELVYRRATCTCIICKVRATERPRTVDQAESSSLRDDVSTMSVAPPFT
RTPSHSAMANFVVRYRLPDKAALSRIGASSSFRELEIGTVVRLNYRASAK
LKLTDDVKELLGHLAYTGPISHEDMYRKVTTIGVHYYLYNKGKKERKVFI
QGELVRLPINVGVIKLGTQPMYMPELGATFCLHRKQIMSIYVGEIVLEGN
AVGSFINTGIHYYIGFGEERGVCPVYPNKTLGKARKLGINELLLHHHMVD
DLEVRCI*
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