Ggra7383.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7383.t1
Unique NameGgra7383.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length223
Homology
BLAST of Ggra7383.t1 vs. uniprot
Match: A0A2V3J4A9 (50S ribosomal protein L10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4A9_9FLOR)

HSP 1 Score: 251 bits (642), Expect = 1.310e-81
Identity = 144/223 (64.57%), Postives = 180/223 (80.72%), Query Frame = 0
Query:    1 MKNFAFAAPLSIGAARFNVGSQVCVAQRGSTAVVNRRANVRMGCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVVGDFLQQSNLWFFVKEDMKGSVEAYEKFAKSEKRSGIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLAVADEE-GDGAPSE 222
            M+NFAFAAP+S+  + FN GS V      S +  +RRA + M  E  IAKKSA+V+SVKERL+ S+MVFAVPLDGL V++V++LR+ LPEGT+A ++KN+LMRRAIA+S+WE +GDFLQQSNLWFFV+ED+K SV+ Y KFAK+ KR GIKGGGF+GE+CD A IQAIAALPSK ELI + A+ ++++PTKLG   XXXXXXXXXXXKLA+ADEE G  A SE
Sbjct:    1 MENFAFAAPISVAISGFNGGSVVTSRVAFSRSGTSRRATIHMISEAVIAKKSAIVESVKERLAVSEMVFAVPLDGLTVANVYQLRQQLPEGTSAVSIKNSLMRRAIAESKWEAMGDFLQQSNLWFFVQEDIKQSVDVYTKFAKTAKREGIKGGGFEGERCDAAGIQAIAALPSKQELIRKIAVSLKIVPTKLGSXXXXXXXXXXXXXKLAIADEEEGSDAASE 223          
BLAST of Ggra7383.t1 vs. uniprot
Match: R7Q865 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q865_CHOCR)

HSP 1 Score: 170 bits (430), Expect = 1.780e-49
Identity = 108/187 (57.75%), Postives = 132/187 (70.59%), Query Frame = 0
Query:   37 RANVRMGCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVVGDFLQQSNLWFFVKEDMKGSVEAYEKFAKSEKRSGIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLAVADE-EGDGAPSE 222
            RA V M  E +I KK   V  VKE L   QM+FA  L GL V+ V+ LR+ +P+ T   TVKNTLMRRAI DS+W    +F   S+LWFFV++D KGSVEA+EKFAK  KR  I GG +DG++CD   I+AIAALPSK ELI + A+G+RM+PTK     XXXXXXXXXXXKLAVADE +GD + +E
Sbjct:   39 RAAVSMVSEVNIDKKREKVALVKESLENCQMLFATNLSGLSVAQVYDLRQRVPKTTKCMTVKNTLMRRAIEDSEWASAHEFTVGSSLWFFVQDDFKGSVEAFEKFAKDLKRDPIIGGVYDGQKCDGEGIKAIAALPSKQELIQKIAVGIRMVPTKXXXXXXXXXXXXXXXXKLAVADESKGDESAAE 225          
BLAST of Ggra7383.t1 vs. uniprot
Match: K0STH8 (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STH8_THAOC)

HSP 1 Score: 142 bits (358), Expect = 1.870e-37
Identity = 80/178 (44.94%), Postives = 110/178 (61.80%), Query Frame = 0
Query:   43 GCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVVGDFLQQSNLWFFVKEDMKGSVEAYEKFAKSE---KRSGIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLAVADEEGD 217
            G  T++  K   V +VKE L  S+MVF VP  G+ V+ V  LRR LPEGTTA  VKN LM RAI  +++E V + L+ +N+WFF++ED+ GSV++++KF K E   +   I GG  +G   D A ++ I+ LPSKIELITQ A  ++ +PTK+ + V           KLA   EEGD
Sbjct:  160 GGATTLEGKKNTVSAVKELLDSSEMVFTVPASGITVAQVQGLRRSLPEGTTAKVVKNKLMSRAIEGTEYEPVNEMLKGANMWFFIEEDIGGSVKSWKKFVKDEALAESHSILGGNIEGTNYDTAGVEQISKLPSKIELITQIASRIQAVPTKVARVVKAPGMKVARAIKLA--GEEGD 335          
BLAST of Ggra7383.t1 vs. uniprot
Match: A0A6V2PHN8 (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PHN8_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.370e-36
Identity = 79/194 (40.72%), Postives = 112/194 (57.73%), Query Frame = 0
Query:   29 GSTAVVNRRANVRM-----GCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVVGDFLQQSNLWFFVKEDMKGSVEAYEKFAKSEKRSG---IKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLAVADE 214
            G T    R  + R+     G  TS A K A V +VKE L +S+MVF+VP   + V+    LRR LPEGTT + VKNTLM+RAI  + ++V G+ L+  N+WFFV+ED+ GS++A+  F K   ++    + GG  +G   D A + AI+ LPSK+ELI Q A  +  +PTK+ + V           KLA  +E
Sbjct:   19 GYTPACQRTRSTRLFGGAQGMATSPAGKQAKVAAVKELLDKSEMVFSVPAGSITVAQTQLLRRALPEGTTMSVVKNTLMQRAIEGTDYQVAGELLKGPNMWFFVEEDIGGSIKAFNAFTKENGKTESHMVLGGVIEGVVYDSAGVTAISKLPSKLELIAQIAGAINAVPTKVARVVKEPGQKLARAIKLATEEE 212          
BLAST of Ggra7383.t1 vs. uniprot
Match: A0A7S2ZLQ0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLQ0_9RHOD)

HSP 1 Score: 129 bits (324), Expect = 3.040e-33
Identity = 81/162 (50.00%), Postives = 111/162 (68.52%), Query Frame = 0
Query:   58 VKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVVGDFLQQSNLWFFVKE-DMKGSVEAYEKFAKSEKR---SGIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLAVADEE 215
            V+E+L +S + FA+PL+G  V +V +LR  +PE + A  VKNTL R AIADS W+V GD  + SNLW F +E DMKG+VEA +KF K +K+   +GI GG  +    D   ++A++ LPSK +L  + AI +  +PTK+G+  XXXXXXXXXX KLA A+EE
Sbjct:   91 VREQLDKSTLAFALPLEGYTVKEVSELRNVIPENSCALAVKNTLFRIAIADSTWDVAGDLTKGSNLWIFTEEADMKGTVEAIKKFNKEKKKEETNGISGGVMENTLYDGKGVEALSKLPSKQDLYQKIAIAINSVPTKVGRXXXXXXXXXXXXIKLAKAEEE 252          
BLAST of Ggra7383.t1 vs. uniprot
Match: A0A448Z550 (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z550_9STRA)

HSP 1 Score: 127 bits (318), Expect = 9.220e-33
Identity = 70/177 (39.55%), Postives = 104/177 (58.76%), Query Frame = 0
Query:   43 GCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWE-VVGDFLQQSNLWFFVKEDMKGSVEAYEKFAKS---EKRSGIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLAVADEE 215
            G  T++  K+  V++VK  L  SQMVF+VP   + V++   LRR +PEGTT + VKNTLM RA+ D+++E      L+ +N+WFF++ED+  S++A+  F K    ++  GI GG  +G   D   ++AI  LPSK EL  + A G+  +PTKL + V           KLA  DE+
Sbjct:   39 GYATTVEGKAEKVEAVKGLLDSSQMVFSVPASFITVAESQSLRRSMPEGTTISVVKNTLMNRAVKDTEFEEAASSLLKGANMWFFIEEDIGASIKAWNAFTKETGKKETHGIIGGVVEGNNYDAKGVEAIGKLPSKKELYAKIAGGINAVPTKLARVVKAPNSKLARAIKLATVDEQ 215          
BLAST of Ggra7383.t1 vs. uniprot
Match: B8BYW1 (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYW1_THAPS)

HSP 1 Score: 125 bits (314), Expect = 3.370e-32
Identity = 76/172 (44.19%), Postives = 101/172 (58.72%), Query Frame = 0
Query:   25 VAQRGSTAVVNRRANVRMGCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVVGD-FLQQSNLWFFVKEDMKGSVEAYEKFAKS---EKRSGIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKL 192
            V Q  ST+        R G  T   KK A V  VKE L  S+MVF VP  G+ VS V  LRR+LPEGTT   VKN LM RAI  +++  +GD FL  +N+WFF++ED+ G+V+ + +F K    +    I GG  +G   D   + AI+ LPSK+ELI Q A  V+ +PTK+
Sbjct:   20 VPQASSTSSTALFGGARGGATTLDGKK-ATVTHVKELLDSSEMVFTVPASGITVSKVQGLRRNLPEGTTVKVVKNKLMARAIEGTEYAPIGDQFLTGANMWFFIEEDIGGTVKTWNQFVKEAGLKDTHSILGGNIEGVNYDTKGVDAISKLPSKMELIAQIAGAVKAVPTKV 190          
BLAST of Ggra7383.t1 vs. uniprot
Match: A0A1X6NXG2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXG2_PORUM)

HSP 1 Score: 124 bits (311), Expect = 1.320e-31
Identity = 85/185 (45.95%), Postives = 121/185 (65.41%), Query Frame = 0
Query:   36 RRANVRM---GCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVVGDFLQQSNLWFFVKEDMKGSVEAYEKFAKSEKRS--GIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLAVADEE 215
            RRA +RM   G   +++ K+AV+++V+E L +++ +F+ PL GL VS V +L+  LPE T   TVKNTLMR+AIA + ++V       SN+WFFVK D+K SV   + F+K+ K    G  GG  +GE  D   + A++ +P+K EL  Q A  ++ +PTKL K+VXXXXXXXXXXXKLA   +E
Sbjct:   40 RRAALRMDGLGNPANLSGKAAVIETVEELLKDTEFLFSAPLPGLTVSQVAELKNSLPEVTKVMTVKNTLMRKAIAGTPFDVAEPLTAGSNMWFFVKGDIKESVAPLKAFSKTYKLKEFGPLGGVLEGEVFDNKGVLAVSEMPTKKELYGQIAFLIQAVPTKLAKSVXXXXXXXXXXXKLAKCPDE 224          
BLAST of Ggra7383.t1 vs. uniprot
Match: A0A7R9UKR4 (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UKR4_DIALT)

HSP 1 Score: 124 bits (311), Expect = 1.880e-31
Identity = 68/162 (41.98%), Postives = 100/162 (61.73%), Query Frame = 0
Query:   47 SIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIA-DSQWEVVGDFLQQSNLWFFV-KEDMKGSVEAYEKFAKSEKRS----------GIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTV 196
            ++ KK A VDSVK RL  S ++F    DG+ V+ +  LR ++PE ++   VKN L++RA+A D +W+ +   L+ SN W FV +ED+K S+EA +KF K   R           G++GG FDG   D   I  ++ LPSK+ELITQ A G+ M+PT+L K++
Sbjct:   79 NLEKKDATVDSVKARLDASALIFTFRADGVPVNKLRALRNEMPERSSITLVKNRLLKRAVAGDPKWDHLNPLLENSNYWAFVHEEDIKPSIEAVQKFLKESGRDKAEHPLGDQRGVRGGVFDGATLDVDGIVKVSKLPSKLELITQIAYGINMVPTRLAKSI 240          
BLAST of Ggra7383.t1 vs. uniprot
Match: A0A5J4Z5L2 (50S ribosomal protein L10 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5L2_PORPP)

HSP 1 Score: 122 bits (305), Expect = 7.600e-31
Identity = 81/198 (40.91%), Postives = 124/198 (62.63%), Query Frame = 0
Query:   20 GSQVCVAQRGSTAVVNRRANVRMGCETSIAKKSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNTLMRRAIADSQWEVV---GDFLQQSNLWFFVKED-MKGSVEAYEKFAKSEKRS---GIKGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVXXXXXXXXXXXKLA 210
            G++   AQR +T     R+ VRM C +++ KKS +V  V   + +S MV ++PL+GL V  V +L+  +PEG T   VKNT+++RA+AD+++ V+    +  +  NLW F+ E+ ++G+VE    F K+ K++    I GG F GE  D   I A++ LP+K EL  Q A+G+  + TK+ + +XXXXXXXXXX KLA
Sbjct:   15 GARAAAAQRRATCA---RSVVRMACASALEKKSKLVSEVSATMQQSTMVLSLPLEGLTVKQVNELKAAVPEGVTVRCVKNTIVKRAVADTEYSVLESGSELTKGHNLWVFIPEESVRGTVEGITGFLKTSKKADTNAINGGVFGGEAYDADGIVALSKLPTKQELYQQIAVGINQVNTKVARAIXXXXXXXXXXVKLA 209          
The following BLAST results are available for this feature:
BLAST of Ggra7383.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4A91.310e-8164.5750S ribosomal protein L10 n=1 Tax=Gracilariopsis c... [more]
R7Q8651.780e-4957.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
K0STH81.870e-3744.94Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A6V2PHN84.370e-3640.72Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2ZLQ03.040e-3350.00Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A448Z5509.220e-3339.55Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B8BYW13.370e-3244.19Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1X6NXG21.320e-3145.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7R9UKR41.880e-3141.98Hypothetical protein (Fragment) n=2 Tax=Diacronema... [more]
A0A5J4Z5L27.600e-3140.9150S ribosomal protein L10 n=1 Tax=Porphyridium pur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043141Ribosomal protein L10-like domain superfamilyGENE3D3.30.70.1730coord: 45..172
e-value: 1.9E-26
score: 94.8
IPR043141Ribosomal protein L10-like domain superfamilySUPERFAMILY160369Ribosomal protein L10-likecoord: 49..209
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 49..143
e-value: 2.3E-18
score: 66.2
IPR001790Ribosomal protein L10PPANTHERPTHR1156039S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 49..200
IPR001790Ribosomal protein L10PCDDcd05797Ribosomal_L10coord: 47..202
e-value: 2.31121E-37
score: 126.08
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..222
IPR022973Ribosomal protein L10HAMAPMF_00362Ribosomal_L10coord: 46..203
score: 17.601744

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:938832..939500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7383.t1Ggra7383.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 938832..939500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7383.t1 ID=Ggra7383.t1|Name=Ggra7383.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=223bp
MKNFAFAAPLSIGAARFNVGSQVCVAQRGSTAVVNRRANVRMGCETSIAK
KSAVVDSVKERLSESQMVFAVPLDGLKVSDVFKLRRDLPEGTTAATVKNT
LMRRAIADSQWEVVGDFLQQSNLWFFVKEDMKGSVEAYEKFAKSEKRSGI
KGGGFDGEQCDEARIQAIAALPSKIELITQFAIGVRMIPTKLGKTVKAIP
TKVGRAIKLAVADEEGDGAPSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043141Ribosomal_L10-like_sf
IPR001790Ribosomal_L10P
IPR022973Ribosomal_L10