Ggra7375.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7375.t1
Unique NameGgra7375.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length616
Homology
BLAST of Ggra7375.t1 vs. uniprot
Match: A0A2V3J1B3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1B3_9FLOR)

HSP 1 Score: 275 bits (704), Expect = 7.570e-81
Identity = 248/635 (39.06%), Postives = 335/635 (52.76%), Query Frame = 0
Query:    1 MSPTTSTQPGSSSGEEWLENIKCPSYFDFEAAVAYPCTVGDDNPPLRESVYDSDDETRGFFRSLQDNPSLHPTLHRRSLSPQRNRLQNMGKPLYRHRPKTTFAEYLTEFQQKKAHQTDGTMSNTIALPSKSDSSPARDLTSQTNLSNSYCTPSPPQQDVHRHNRSDGWTPKFSKDEKSAPSRRPRRSPASTVSTKVE----QRVILEQPRPQAQPNPARRKPRPPERSVPRAASSTLAKNGRLSKPILARPTLGAEREFSSDTTGNRCTQNSGLTEKGGGSLKPTSASRSRSDHYLAGLQASVAE-DNTIPDLDFVKIMEAHNQRLRIRKSERRSGSTNSSTESEKA------------FDSSQPSEHVPPTAPEEGAYRGNNHRAMNGDRRGPDLSENGVPRLMVDAGENSTEGR--IHSTKSSSTRENSLSELLQMENEKVLEERKRXXXXXXXXXXXXXXXALRNI-RASGIGDRRINPISAQIEFTSAEVKRPLGRANDITQSNSHQKNEQKQLSDAQYGRNQKRGLLGYRSRMHESKPNLSSGAFNDERHQARTTNLCRTGRPKANTKNPPLRADMNAREADPSTLRDTEEDPTQIWP-SKIEASDDLNLLLSEHNNRIRKNRAAVGAIN 614
            M P ++T+P ++S + WLENI+CP Y+DFEAAVAYPCT G  NPPLRESVYDSDDETR FF SL++NPSLHPTLHRRSLSP+RN L+++G+P+YRHRP TTF EYL EF+ K     D  ++ + AL S+  S  A DL +Q     S  TPSPP   +     S    PK + ++K  P RRPRR   S+ S + E    Q+ +++Q       NPARR+ R      P  A+ST     R+     A  T        SD  G+R   +    E      K +S SRS +       +  +AE D+   DLD VKIME HN+RLR  KSER +GST S+ +                F     +E + PT        GN                N V +L +   E + E R  +  +K   +   SLS+LL+ ENEKVL+    XXXXXXXXXXXXXX ALRN+ + S   +RRINPISA++EFT+ E K PL        + ++    +   + + +G N++RGL GY  R    KP  +S   + +     TT+    G        P +  +   R+    + +  +     + P S  +  DDL LLLSEHN++IRK+R     IN
Sbjct:    1 MPPASNTRPSANSEQAWLENIRCPMYYDFEAAVAYPCTAGQHNPPLRESVYDSDDETRDFFLSLEENPSLHPTLHRRSLSPERNTLRSIGRPVYRHRPNTTFEEYLAEFRSKALQ--DDQVAPSTALTSEHSSPLATDLKTQECALKSDRTPSPPH--LQTAGTSVLHAPKQNANDKVMPQRRPRRPQTSSGSGRTECISSQKKLIQQ----GHRNPARRRQRVSPPVPPSKATST----HRVVNSAKADATTDRNSN-ESDGLGHRRADDLSSNENRMSYWKLSSLSRSDAADSPVAHEHHLAESDSFTVDLDIVKIMEEHNERLRKSKSER-AGSTISARDQSDGTVRGGESFETDIFTDDSANEAIKPT------QFGNQS-----------AGHNRVGQLGLCNSELNREYRNSVGISKPIESNGASLSDLLEKENEKVLKXXXXXXXXXXXXXXXXXXNALRNMGQVSVTENRRINPISARVEFTTVEAKTPLTEVESSKSAETNTSTVRGLRAASNHGENRERGLKGYLCR--GGKPTTTSTLASRQNRANPTTSNKSHG--------PRVLTERTVRQPRQLSAQSGKHPTATMSPASNKDEQDDLALLLSEHNSKIRKSRRLAATIN 594          
The following BLAST results are available for this feature:
BLAST of Ggra7375.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1B37.570e-8139.06Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 184..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..417
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:917901..919748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7375.t1Ggra7375.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 917901..919748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7375.t1 ID=Ggra7375.t1|Name=Ggra7375.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=616bp
MSPTTSTQPGSSSGEEWLENIKCPSYFDFEAAVAYPCTVGDDNPPLRESV
YDSDDETRGFFRSLQDNPSLHPTLHRRSLSPQRNRLQNMGKPLYRHRPKT
TFAEYLTEFQQKKAHQTDGTMSNTIALPSKSDSSPARDLTSQTNLSNSYC
TPSPPQQDVHRHNRSDGWTPKFSKDEKSAPSRRPRRSPASTVSTKVEQRV
ILEQPRPQAQPNPARRKPRPPERSVPRAASSTLAKNGRLSKPILARPTLG
AEREFSSDTTGNRCTQNSGLTEKGGGSLKPTSASRSRSDHYLAGLQASVA
EDNTIPDLDFVKIMEAHNQRLRIRKSERRSGSTNSSTESEKAFDSSQPSE
HVPPTAPEEGAYRGNNHRAMNGDRRGPDLSENGVPRLMVDAGENSTEGRI
HSTKSSSTRENSLSELLQMENEKVLEERKRRLPERRKALQENRRNALRNI
RASGIGDRRINPISAQIEFTSAEVKRPLGRANDITQSNSHQKNEQKQLSD
AQYGRNQKRGLLGYRSRMHESKPNLSSGAFNDERHQARTTNLCRTGRPKA
NTKNPPLRADMNAREADPSTLRDTEEDPTQIWPSKIEASDDLNLLLSEHN
NRIRKNRAAVGAINN*
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