Ggra7372.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7372.t1
Unique NameGgra7372.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length307
Homology
BLAST of Ggra7372.t1 vs. uniprot
Match: A0A2V3J2G8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2G8_9FLOR)

HSP 1 Score: 451 bits (1161), Expect = 4.940e-158
Identity = 199/294 (67.69%), Postives = 247/294 (84.01%), Query Frame = 0
Query:   12 MRALLGIALVLSLCQTITGDFGPCRYDDDRCSCKVGEPNQGTCWDKSANAPGQCTKRFCRAGWTCACGGRTNVCYRSPKTINTLKNAADITKNIADCVTTTFPLVVGREISLGTIKFHFSRAGTLANDCTQVAWWHNGDLLGNRKETLLMTSSVVDEELKKREEHSLLELRPGDLIAFRFREGSYYCYKHFAEMVINGTSVNSETLGFKTFYAREYSEDWFMPSYVLTDKNTAEDETEPNLQKFLPLRSKKLASDTTIVPGNDYWEPRDDNNADNKRSNWYFRIQVPDEIPSLS 305
            MR  L + ++L+L QT+ GD GPCRYD+DRCSCK+G+ NQGTCWDK A +PG+C++R+CRAGWTCACGGRT+VCYR+ K +N+LKN ADI+K++A+CVT +FPLV G E++LG +KFHFSR G LA+DC +VAWWHNG+LLGNRK   + + S VD+ LK REEH+LLELRPGDLIAFRFR+ SYYCYKH  E VINGTSVNSE LGF T YARE+++DWF PSY LTD+N  EDETEP+++KFLPLR+ KL++  +IVPG+DYWEPRD N+ DNK SNWYFRIQVPD IP ++
Sbjct:    1 MRDFLVVLVILALSQTVFGDVGPCRYDEDRCSCKLGKANQGTCWDKIAESPGECSRRYCRAGWTCACGGRTHVCYRANKPVNSLKNPADISKSVAECVTKSFPLVAGHELTLGRLKFHFSRKGALADDCNEVAWWHNGELLGNRKPVSITSPSDVDKVLKDREEHTLLELRPGDLIAFRFRDSSYYCYKHLTEFVINGTSVNSEALGFTTHYAREFTKDWFSPSYALTDQNMGEDETEPDIRKFLPLRTTKLSNSVSIVPGSDYWEPRDSNSPDNKPSNWYFRIQVPDVIPKIT 294          
BLAST of Ggra7372.t1 vs. uniprot
Match: A0A2V3J1C3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1C3_9FLOR)

HSP 1 Score: 186 bits (472), Expect = 7.140e-54
Identity = 108/287 (37.63%), Postives = 153/287 (53.31%), Query Frame = 0
Query:   22 LSLCQTITGDFGPCRYDDDRCSCKVGEPNQGTCWDK--SANAPGQCTKRFCRAGWTCACGGRTNVCYRSPKTINTLKNAADITKNIAD--------CVTTTFPLVVGREISLGTIKFHFSRAGTLANDCTQVAWWHNGDLLGNRKETLLMTSSVVDEELKKREEHSLLELRPGDLIAFRFREGSYYCYKHFAEMVINGTSVNSETLGFKTFYAREYSEDWFMPSYVLTDKNTAEDETEPNLQKFLPLRSKKLASDTTIVPGNDYW-EPRDDNNADNKRSNWYFRIQV 297
            L L   + G+  PCRYD   CSCK G   QG C D+    ++ G C +R+CRAGWTCAC GRT++C         LKNA   T+++ D        C   T        I LG+     S+   L N+C  + WW NG+LLG   ET  +    VD EL +R  H+ +EL+ GDL+AFRFR+ SY+C+ H +++ +NG  V          +AR++S+DW  PS+     N A DE       FLPLR+   +   TI  G DYW +P      D+++ N+Y+R+Q+
Sbjct:   12 LILVAALHGETIPCRYDTKYCSCKYGSERQGRCLDRIGGTSSRGPCIERYCRAGWTCACLGRTHLC--------PLKNA---TRSVVDSLSGSQLYCRDETIQGAGLPSIKLGSWTIGISKKALLENECKDMKWWLNGELLGEYGETPRINRFNVDYELLRRGTHTAIELKRGDLLAFRFRDASYHCFTHVSDIEVNGQIVRLGDSSLSIRFARQFSQDWNEPSFT---PNLASDEDLALPTDFLPLRTNFFSDGRTINAGWDYWTQPA--GTRDHEKGNFYYRVQL 282          
BLAST of Ggra7372.t1 vs. uniprot
Match: R7Q5X4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5X4_CHOCR)

HSP 1 Score: 181 bits (459), Expect = 8.560e-52
Identity = 101/294 (34.35%), Postives = 158/294 (53.74%), Query Frame = 0
Query:   18 IALVLSLCQTITGDFGPCRYDDDRCSCKVGEPNQGTCWD--KSANAPGQCTKRFCRAGWTCACGGRTNVCY------RSPKTINTLKNAADITKNIADCVTTTFPLVVGR-EISLGTIKFHFSRAGTLANDCTQVAWWHNGDLL---GNRKETLLMTSSVVDEELKKREEHSLLELRPGDLIAFRFREGSYYCYKHFAEMVINGTSVNSETLGFKTFYAREYSEDWFMPSYVLTDKNT--AEDETEPNLQKFLPLRSKKLASDTTIVPGNDYWEPRDDNNADNKRSNWYFRIQV 297
            +A++L++  +   + G C Y DD+CSCK+G    G C D    ++  G C  R+C++GWTCAC GRT++C       R P   +           +  C   T      R ++ LG+    +SR G L  +C  +AWW +G ++   GN +    +++  VDE L  R  ++L  LRPG +IAFRF+  SY+C+  FA +++NGT +++     K  ++R +  +WF P     D N   AEDE+   +  F+P+R K L   + I  G D W+P D  + D+KRSN+YFR +V
Sbjct:   10 LAMILAMAPSTMAEVGECMYGDDQCSCKMGSGESGVCLDLISGSDNDGMCKSRYCKSGWTCACQGRTDLCNMTEIRARIPGGTSGSDPIRQAVGEMIPCHEETRMSAASRGKLILGSFLPKYSRKGLLNGNCKHLAWWVDGKMIQSYGNEQ----VSADNVDEILNARANNTLFPLRPGSVIAFRFKNASYHCFNSFATVLVNGTELDTNNPTVKVRFSRAHKSNWFAP-----DANIVYAEDESTAAVTDFVPMRRKMLFDGSDIANGKDNWKPPD-GSEDHKRSNFYFRFEV 293          
BLAST of Ggra7372.t1 vs. uniprot
Match: A0A2V3IDR1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDR1_9FLOR)

HSP 1 Score: 138 bits (347), Expect = 3.680e-35
Identity = 87/281 (30.96%), Postives = 140/281 (49.82%), Query Frame = 0
Query:   31 DFGPCRYDDDRCSCKVGEPNQGTCW---DKSANAPGQCTKRFC-RAGWTCACGGRTNVC-YRSPKTINTLKNAADITKNIADCVTTTFPLVVGREISLGTIKFHFSRAGTLANDCTQVAWWHNGDLLGNRKETLL--MTSSVVDEELKKREEHSLLELRPGDLIAFRFREGSYYCYKHFAEMVINGTSVNSETLGFKTFYAREYSEDWFMPSYVLTDKNTAEDETEPNLQK-------FLPLRSKKLASDTTIVPGNDYWEPRDDNNADNKRSNWYFRIQV 297
            + G CR DDD CSCK    +   CW     +     +C K  C + GW C+C GR  VC  +  +    L+   D T     C   T  +     + LG+++   SR G ++N C ++ W++NG+ + N  +     +  + VD E+ +R  H+ +EL+ GDLIAFRF+  SY+C+   A+  I+G  ++S        Y  +++  W  PS+  T      +++  N+ +       F+PLR +   +   I+PG DYW P D    D+K  N+YFRIQ+
Sbjct:   23 EVGHCRKDDDYCSCKWSGLDADMCWYPMGDNTQEEFECAKAPCGKTGWICSCEGREYVCPMKRVEHPTYLQEMNDKTY----CRNMTSEMAGPPLLRLGSLEIGLSRKGMVSNACNELVWFYNGEFMVNYGDDSNPEINCANVDYEIDRRANHTSIELKRGDLIAFRFKHASYHCFTSIAKFYIDGKRLSSMDKEVVIRYTTKHTPGWHHPSF--TPMYPKNNDSVYNVTEGTEAAGVFVPLRRRFFETGEKIMPGKDYWHPPD-GGRDHKVGNFYFRIQL 296          
The following BLAST results are available for this feature:
BLAST of Ggra7372.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J2G84.940e-15867.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1C37.140e-5437.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5X48.560e-5234.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IDR13.680e-3530.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..306
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:905450..906370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7372.t1Ggra7372.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 905450..906370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7372.t1 ID=Ggra7372.t1|Name=Ggra7372.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=307bp
MYYSSFRFQFNMRALLGIALVLSLCQTITGDFGPCRYDDDRCSCKVGEPN
QGTCWDKSANAPGQCTKRFCRAGWTCACGGRTNVCYRSPKTINTLKNAAD
ITKNIADCVTTTFPLVVGREISLGTIKFHFSRAGTLANDCTQVAWWHNGD
LLGNRKETLLMTSSVVDEELKKREEHSLLELRPGDLIAFRFREGSYYCYK
HFAEMVINGTSVNSETLGFKTFYAREYSEDWFMPSYVLTDKNTAEDETEP
NLQKFLPLRSKKLASDTTIVPGNDYWEPRDDNNADNKRSNWYFRIQVPDE
IPSLSL*
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