Ggra7349.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7349.t1
Unique NameGgra7349.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length759
Homology
BLAST of Ggra7349.t1 vs. uniprot
Match: R7Q9H5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9H5_CHOCR)

HSP 1 Score: 376 bits (966), Expect = 1.470e-115
Identity = 275/778 (35.35%), Postives = 376/778 (48.33%), Query Frame = 0
Query:    7 RSWLFQNHAPDTAHVIKSLLSSPILLGYVFGS-HSDPQPLDFPDIGDLHTVFTNDNHTALGFHFGFQGIHPIMPLLFQVAKDPSLRNPNVVVRRTATLKYPTA--NCFFKIEMNWFESGVLAVSTSLCPIHPSHSRPPGLTPFFDNAELRVFKRATAERFLRTVRMLDHNVTTPN--HPAHLDKCVQHFFDPPDDCYTLTVCEPDDPSYHTQLRPVSTVRRDCDQQSFNVECE--MDSHVNNT-------------TTNTSNITPLPLPRH----------CDRGEHGSVAEPDTIKLWAAYQNVVAQSRRLGIFHSVMERRTGGPFGKQLRLYGRDVRYTFLSTSGINARGRVHRLCSQIGINYSGPRTDRHLLQAPSAEDGTTTLRGSD-IGVADGVEGELDITEPLSECSFEGKRRRIFDTSAPFPVYPQTVPKTAIVQ--GPAKKPRFGFNSTDWGQPPTEDAFSAKLRREGAGRHEGVNVLANAKRSSPPCMPSEVPRKLPASEFERFDKSHQKTNIDSLVTAAKQLE-QWAQSSSIDESTTAREANRISSGTLKRRRSFNRLITLAKDESSQLSGNASSFYVFHPHLSRGAVSSANTKTRDVLDTASHGIGTDE-------SHSGIGPGNPDKETTSSKPAT---TIWTCEICGVPIRGKKGNLNRHIANKHENIRAYACKVPSCGKRFQTRLNLVRHEKAVHQGRPFLCGQCPRTFKTAEHLQSHQVSAHGVASAALACEVCGGCFGRRSTLNRHLSKVHKIDPKGVKNTG 740
            R+WLF+  AP  AHV+++LLSSPIL+GYVF   H   +   FPDIGDLHTVF  D    LGF FGFQG +P+MPLLFQV +DP L NPNV+VR+TA  + P    + +  IE NW ESG L V TS+     + + P G   F   +E RVF R +A +       L   ++  +  H +        F DPPDD + L V E DD  YH  L P+S +      Q F VE +  + S   N+             T +T N  P  L  H          C +G+  SVAE +T+KLW  YQ  V + RR G   +++  + GG F K++ +YGRD RY FLSTSG+N  GR+ +L SQ+ I +  P         P+++  T  L  SD +  A   + ++D+       +  G     F         P  V    +V   G  +  R G N   WG   + D  +  ++ +    H G   +   +R++          +L AS                L T   Q+  Q AQ  +        +  ++++     R S         D ++ LS +  S  V    +     S+A   T   L   SHG   +E         +    G   K   ++K  T    +WTC  CG  IRGKKGNLNRHIANKH+NIRAY C  P+C ++FQTRLNLVRH+ AVH GRP+ C                   AH  +  +LAC+VCG CFGRRSTLNRH++KVHK++ K V+NTG
Sbjct:   44 RAWLFERTAPLKAHVVQALLSSPILVGYVFSDLHIPSRSYSFPDIGDLHTVFCRDGDALLGFSFGFQGRNPVMPLLFQVIRDPMLGNPNVIVRKTAKQRAPRPYQDYYLCIEFNWLESGALGVVTSITSSDSNENTPSGRCSFVLQSEHRVFNRRSAAKLSAMADQLSPYISHASLPHLSPFHTLPPDFADPPDDYHMLIVKEYDDSDYHA-LDPLS-LNPASKNQVFEVESDFAVPSTAANSXXXXXXXXTNISHTESTHNSNPTELQGHTPFLGGALLHCHKGDGSSVAEAETVKLWRHYQGAVDKCRRTGNLMTMLGTKVGGRFAKEVPVYGRDARYRFLSTSGVNVHGRIQQLFSQLDIQFGSPHP------GPNSKLYTRQLECSDSLSEALVEDHKVDLAGGDRSLATAGGMSSGFS--------PNMVEDFEVVDAVGGTRYER-GANERRWGPSSSSDQ-AVGVQNDREPLHNGDERIRKRRRTTD----VNGVTRLSASRHSAVP----------LPTGFVQMPFQPAQQDADSPRKMYIKQEQVATILPSLRNSC--------DLTNILSNDTLSISVNPAGIENRGWSAAAVATSATLSHGSHGGSKEEPTFTSQAEQNQCTQGVETKAVETAKRDTGTKAVWTCHRCGQKIRGKKGNLNRHIANKHDNIRAYECTRPNCDRKFQTRLNLVRHDTAVHLGRPYTCXXXXXXXXXXXXXXXXXXXAHKNSQLSLACKVCGSCFGRRSTLNRHMAKVHKVEGK-VENTG 780          
BLAST of Ggra7349.t1 vs. uniprot
Match: A0A2J7Q9Z0 (Uncharacterized protein n=2 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7Q9Z0_9NEOP)

HSP 1 Score: 71.2 bits (173), Expect = 5.870e-9
Identity = 39/100 (39.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:  632 LNRHIANKHENIRAYACKVPSCGKRFQTRLNLVRHEKA------VHQGRPFLCGQCPRTFKTAEHLQSHQVSAH-GVASAALACEVCGGCFGRRSTLNRH 724
            L  H+   H   R+Y C++  CGK F  + +L+RH K       V   +PFLCG+CPRTFKT   L+SH    H        +CE+C   F  RST+  H
Sbjct:  598 LRVHVTGTHLGCRSYQCEI--CGKGFIQKNHLIRHMKVHNNSKDVRSAKPFLCGKCPRTFKTKSRLESHTRVEHIEPGERPYSCEICNKRFAGRSTVIYH 695          
BLAST of Ggra7349.t1 vs. uniprot
Match: A0A6L2Q230 (Uncharacterized protein (Fragment) n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q230_COPFO)

HSP 1 Score: 70.5 bits (171), Expect = 1.060e-8
Identity = 40/100 (40.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:  632 LNRHIANKHENIRAYACKVPSCGKRFQTRLNLVRHEKA------VHQGRPFLCGQCPRTFKTAEHLQSHQVSAH-GVASAALACEVCGGCFGRRSTLNRH 724
            L  HI   H   R+Y C++  CGK F  + +L+RH K       V   +PFLCG+CPRTFKT   L+SH    H        +CE+C   F  RST+  H
Sbjct:  750 LRVHITGTHLGCRSYQCEI--CGKGFIQKNHLIRHMKVHDNTRDVRNTKPFLCGKCPRTFKTKSKLESHTRVEHIEPGERPYSCEICNKRFAGRSTVIYH 847          
The following BLAST results are available for this feature:
BLAST of Ggra7349.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
R7Q9H51.470e-11535.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2J7Q9Z05.870e-939.00Uncharacterized protein n=2 Tax=Cryptotermes secun... [more]
A0A6L2Q2301.060e-840.00Uncharacterized protein (Fragment) n=1 Tax=Coptote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 676..699
e-value: 0.062
score: 22.4
coord: 646..671
e-value: 0.0011
score: 28.2
coord: 616..640
e-value: 31.0
score: 9.0
coord: 706..729
e-value: 0.041
score: 23.0
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 677..699
e-value: 8.8E-4
score: 19.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 708..729
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 648..671
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 678..699
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 646..676
score: 12.611502
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 706..734
score: 10.200661
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 676..699
score: 9.888914
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 675..707
e-value: 1.9E-6
score: 29.6
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 708..739
e-value: 5.6E-5
score: 25.1
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 593..674
e-value: 1.4E-9
score: 39.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..609
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 734..754
NoneNo IPR availablePANTHERPTHR24409ZINC FINGER PROTEIN 142coord: 526..729
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 674..725
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 629..685

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:845584..851506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7349.t1Ggra7349.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 845584..851506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7349.t1 ID=Ggra7349.t1|Name=Ggra7349.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=759bp
MRSRSTRSWLFQNHAPDTAHVIKSLLSSPILLGYVFGSHSDPQPLDFPDI
GDLHTVFTNDNHTALGFHFGFQGIHPIMPLLFQVAKDPSLRNPNVVVRRT
ATLKYPTANCFFKIEMNWFESGVLAVSTSLCPIHPSHSRPPGLTPFFDNA
ELRVFKRATAERFLRTVRMLDHNVTTPNHPAHLDKCVQHFFDPPDDCYTL
TVCEPDDPSYHTQLRPVSTVRRDCDQQSFNVECEMDSHVNNTTTNTSNIT
PLPLPRHCDRGEHGSVAEPDTIKLWAAYQNVVAQSRRLGIFHSVMERRTG
GPFGKQLRLYGRDVRYTFLSTSGINARGRVHRLCSQIGINYSGPRTDRHL
LQAPSAEDGTTTLRGSDIGVADGVEGELDITEPLSECSFEGKRRRIFDTS
APFPVYPQTVPKTAIVQGPAKKPRFGFNSTDWGQPPTEDAFSAKLRREGA
GRHEGVNVLANAKRSSPPCMPSEVPRKLPASEFERFDKSHQKTNIDSLVT
AAKQLEQWAQSSSIDESTTAREANRISSGTLKRRRSFNRLITLAKDESSQ
LSGNASSFYVFHPHLSRGAVSSANTKTRDVLDTASHGIGTDESHSGIGPG
NPDKETTSSKPATTIWTCEICGVPIRGKKGNLNRHIANKHENIRAYACKV
PSCGKRFQTRLNLVRHEKAVHQGRPFLCGQCPRTFKTAEHLQSHQVSAHG
VASAALACEVCGGCFGRRSTLNRHLSKVHKIDPKGVKNTGSRGNPGKPVD
VGAQPFKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf