Ggra7336.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7336.t1
Unique NameGgra7336.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length570
Homology
BLAST of Ggra7336.t1 vs. uniprot
Match: A0A2V3J1A6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1A6_9FLOR)

HSP 1 Score: 754 bits (1947), Expect = 7.650e-269
Identity = 400/576 (69.44%), Postives = 468/576 (81.25%), Query Frame = 0
Query:    1 MYHQRFDERTSVSTDAFEDSDAFGIPIVRHEQSRSDSAYLPEIDATSPRSKRSFFPNKESSTFHVPASFSSRSRSSNAMR-----SAENQSARMRPRSTVDVRSSRALRDEFDEHAYEMDFANDPTVMLDDVADDSDSQDDTTVIDIRSANRHARDSAHPIKPKRKSPSP--TNVKVRKIDPSPYAPVKPACMQPTGGQCKLYHAYTDALQREARGSAGGLRVIVDLLRESDGNPIVIEKAAMAIGILSENDGATRDVFGQHSAVQSLIQCLSIKPTLSKFYDRARIVSAVVYAVSCLLKDSPRNIRLFEMFDGPQKMGRAAASSRYENCPTIAKHALQALSELKHHPAHASESFIASSMSSSSSRTIKFVLKSMGLHEHRIDIQEYGLDALRTLLARAGRHNIRMDVLHLCAQATSTAFKMHHESKEVQWQCLTLLCDLDDMKDDLFSLELEVDCFFGSLHLIINDAKISSQRDPALEKVLMELIHRAMDIAVMNGWRNHDFVDAAVDAGAVETVMEALTVFGNDIQLVDKICAVLRQLVQSAEGKYRMQSTESACAILSGIEAVNLKASHLLPS 569
            MYHQR  +R S S  AFED+DA G+PIVRHEQS+SD+AYLPEIDAT  + +RSF    +    H P S ++R RSS  +      +         PRSTVD  S  +LRDE+DEH Y +DF  +  V+LDD+AD+SDSQ+DTTV+DIR      +D  HP  P R       +  KV KI  SPY  +     Q T G+ KLYHAYTDALQREARGSAGGLRVIVDLLRESDGNPIVIEKAA+AIGILSEND ATRDVFGQHSAVQSLIQCLSIKPTL+KFYDRAR+VSAVVYAV+CLLKDSPRN+RLFEMFDGPQKMG+ AASSRYENCP+IA +ALQALSELKHHPAH+S+SFIA++ +S+SSRTIKFVLKSMGLHEHR+D+QEYGLDALRTLLAR+ + + RMD+LHLC QAT+TAFKMH+ESKEVQWQCLTLLCDLDDMKDDLFSLELEV+ FFG+LHL+I +AK++  RD  L+++L+EL+ RAMD+A  NGW+NHDF+D+AVDAGA+ETVMEAL VFG  +QL DKICAVLRQL+QSAEG+YRM ST SA +ILSGIEAVN+ AS LLPS
Sbjct:    1 MYHQRLADRNSQSAHAFEDTDADGVPIVRHEQSQSDTAYLPEIDATL-QPQRSFL--NQQPAHHAPQSQTTRRRSSQHITRPLSPTTSTPPRHTTPRSTVDYNSPHSLRDEYDEHTYGLDFVTNHDVLLDDIADESDSQEDTTVLDIRRHQPMLQDH-HPQPPSRAKQKSEFSETKVGKIQQSPYI-MPTTTTQSTAGERKLYHAYTDALQREARGSAGGLRVIVDLLRESDGNPIVIEKAALAIGILSENDSATRDVFGQHSAVQSLIQCLSIKPTLTKFYDRARLVSAVVYAVACLLKDSPRNVRLFEMFDGPQKMGKVAASSRYENCPSIASNALQALSELKHHPAHSSDSFIAAASTSTSSRTIKFVLKSMGLHEHRMDVQEYGLDALRTLLARSRKESFRMDLLHLCVQATATAFKMHNESKEVQWQCLTLLCDLDDMKDDLFSLELEVESFFGALHLVIGEAKVNGSRDAILKRILVELVCRAMDVAERNGWKNHDFIDSAVDAGAMETVMEALEVFGEHVQLADKICAVLRQLMQSAEGQYRMHSTNSAYSILSGIEAVNMNASQLLPS 571          
BLAST of Ggra7336.t1 vs. uniprot
Match: R7QDC5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDC5_CHOCR)

HSP 1 Score: 412 bits (1058), Expect = 6.190e-134
Identity = 239/483 (49.48%), Postives = 323/483 (66.87%), Query Frame = 0
Query:  104 RDEFDEHAYEMDFANDPTVMLDDVADDSDSQDDTTVIDIRSANRHARDSAHPIKPKRKSPSPTNVKVRK---------IDPSPYA--PVKPACMQPTGGQCKLYHAYTDALQREARGSAGGLRVIVDLLRESDGNPIVIEKAAMAIGILSENDGATRDVFGQHSAVQSLIQCLSIKPTLSKFYDRARIVSAVVYAVSCLLKDSPRNIRLFEMFDGPQKMGRAAASSRYENCPTIAKHALQALSELKHHPAHA-SESFIAS---SMSSSSSRTIKFVLKSMGLHEHRIDIQEYGLDALRTLLARAGRHNIRMDVLHLCAQATSTAFKMHHESKEVQWQCLTLLCDLDDMKDDLFSLELEVDCFFGSLHLIINDAKISSQR--DPALEKVLMELIHRAMDIAVMNGWRNHDFVDAAVDAGAVETVMEALTVFGNDIQLVDKICAVLRQLVQSAEGKYRMQSTESACAILSGIEAVNLKASHLLPS 569
            RD  D+H+ + D +++     D     +  QDD     I S +     S   I  K K PS    K R+         I  SPY+  P +         +   Y+AYTD LQ +ARG  GGLR IVDLLR+S+GNPIVIEKAA+ IG+LSE D ATRD FGQ +AVQ+LIQCLS++ T    +DR+ IV  V +A++CLL+DSPRN+RLFEMFDGP KMG+AAAS RYEN P I K+AL+ALSELK++P  A S + I +   + SS+ SRT+ +VL++M LHE+R +IQE GLDALRTL++R+G  +I  +++    Q+  TAFKMH ES EV+WQ LTLLCDL+  ++D FS++L+V+CFFG+L  +++DA   +++         L+ L+ RA+ +AV  GWR  +F + AVDAGA+ETV+EAL  FG D ++VDKI ++LR L+QS EGK+RM S  SACAIL+GIE  N KA+ +L S
Sbjct:  118 RDPDDDHSLDPDHSDEIQPPSDTDFSRTTFQDDPFFSSIASDSEQENKSR--INYKSKGPSSRQKKKRRESSQEGTSPIHESPYSHLPSRQVSSATANAESLSYNAYTDVLQSQARGDGGGLRTIVDLLRDSEGNPIVIEKAALVIGLLSEKDAATRDAFGQFAAVQTLIQCLSMRITAR--FDRSLIVKNVTFALTCLLRDSPRNLRLFEMFDGPYKMGKAAASDRYENKPDIPKYALRALSELKYYPQSAESVNSIRTDRLTRSSTVSRTVLYVLRAMSLHEYRTEIQECGLDALRTLISRSGSGSIDSEIVRKSTQSIGTAFKMHKESAEVRWQSLTLLCDLEGRREDFFSVDLDVECFFGALRAVVSDAARENEKLTSDTANTSLVGLLKRAITVAVNVGWRRKEFTERAVDAGAIETVLEALDFFGKDQEIVDKIYSILRVLLQSDEGKFRMNSVRSACAILAGIETGNQKAAVVLSS 596          
The following BLAST results are available for this feature:
BLAST of Ggra7336.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1A67.650e-26969.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDC56.190e-13449.48Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 201..243
e-value: 0.12
score: 21.4
coord: 493..535
e-value: 26.0
score: 10.0
coord: 244..293
e-value: 260.0
score: 2.2
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 212..245
score: 9.6424
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 195..559
e-value: 5.9E-17
score: 63.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..93
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 205..544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:806816..808525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7336.t1Ggra7336.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 806816..808525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7336.t1 ID=Ggra7336.t1|Name=Ggra7336.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=570bp
MYHQRFDERTSVSTDAFEDSDAFGIPIVRHEQSRSDSAYLPEIDATSPRS
KRSFFPNKESSTFHVPASFSSRSRSSNAMRSAENQSARMRPRSTVDVRSS
RALRDEFDEHAYEMDFANDPTVMLDDVADDSDSQDDTTVIDIRSANRHAR
DSAHPIKPKRKSPSPTNVKVRKIDPSPYAPVKPACMQPTGGQCKLYHAYT
DALQREARGSAGGLRVIVDLLRESDGNPIVIEKAAMAIGILSENDGATRD
VFGQHSAVQSLIQCLSIKPTLSKFYDRARIVSAVVYAVSCLLKDSPRNIR
LFEMFDGPQKMGRAAASSRYENCPTIAKHALQALSELKHHPAHASESFIA
SSMSSSSSRTIKFVLKSMGLHEHRIDIQEYGLDALRTLLARAGRHNIRMD
VLHLCAQATSTAFKMHHESKEVQWQCLTLLCDLDDMKDDLFSLELEVDCF
FGSLHLIINDAKISSQRDPALEKVLMELIHRAMDIAVMNGWRNHDFVDAA
VDAGAVETVMEALTVFGNDIQLVDKICAVLRQLVQSAEGKYRMQSTESAC
AILSGIEAVNLKASHLLPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold