Ggra7332.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7332.t1
Unique NameGgra7332.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length263
Homology
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BLAST of Ggra7332.t1 vs. uniprot
Match: A0A2V3J162 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J162_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 1.110e-57
Identity = 149/264 (56.44%), Postives = 162/264 (61.36%), Query Frame = 0 
Query:   12 PSPSALAAVTAQAAVTPTPLTPARELLHRDPLXXXXXXXXXXXXXXXXXXXXXXXRSPG------AFGQQLLFGSHTASPPCWTPS--LPHG---AGVPRSASPRGSTGG-DVPMAGGATTGGELSPLA----VSPGVSASPHAPPMLAGVGGARTGRSRGVHRASKPPLGGPSLTAGASALLPPLAHVAPKNPPTHIDLGGLGEDEASSSLPALGSPHTELSPLPVASPIFGTSQTPTSXXXXXXPFSGGHVSSAKCKAPTAW 259
            PSP  L   +A    TP PLTPARELL R+PL                        S G      AF QQ LF SH AS P W PS  LP     + +PRSASP       DV M        +LSPL     +SPGV+ SP  PPML  V  +R  R    HRA+KPPL GPSLTAGASALLPPL +VAPKNPPTHI+LG L E+E SSSLPALGSPHTELSPLPVASPIFGTSQTPTSXXXXXX FSG HVSSA+ K   AW
Sbjct:   25 PSPQPL---SAHPQTTPAPLTPARELLKREPLIPKSPQSALLAHSSTQSLLPSPSASLGMPRSLNAFCQQFLFPSH-ASSPMWGPSSSLPMAHTSSALPRSASPSSHVASTDVTML-PPDAPAQLSPLPSELPISPGVT-SPVPPPMLPQVSASRPRRVP--HRAAKPPLAGPSLTAGASALLPPLTNVAPKNPPTHIELGHL-EEEHSSSLPALGSPHTELSPLPVASPIFGTSQTPTSXXXXXXXFSGNHVSSARSKIANAW 279
The following BLAST results are available for this feature:
BLAST of Ggra7332.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1621.110e-5756.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..76
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:797152..797940 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7332.t1Ggra7332.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 797152..797940 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7332.t1 ID=Ggra7332.t1|Name=Ggra7332.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=263bp
MHGAQSGVLCVPSPSALAAVTAQAAVTPTPLTPARELLHRDPLMCKSPPN
SLLPSSSLLPSPGGLPRSPGAFGQQLLFGSHTASPPCWTPSLPHGAGVPR
SASPRGSTGGDVPMAGGATTGGELSPLAVSPGVSASPHAPPMLAGVGGAR
TGRSRGVHRASKPPLGGPSLTAGASALLPPLAHVAPKNPPTHIDLGGLGE
DEASSSLPALGSPHTELSPLPVASPIFGTSQTPTSPMQPFSPFSGGHVSS
AKCKAPTAWYQA*
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