Ggra7322.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7322.t1
Unique NameGgra7322.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length348
Homology
BLAST of Ggra7322.t1 vs. uniprot
Match: A0A2V3J158 (Protein neuralized n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J158_9FLOR)

HSP 1 Score: 431 bits (1107), Expect = 2.400e-148
Identity = 242/350 (69.14%), Postives = 269/350 (76.86%), Query Frame = 0
Query:    1 MSQPSESP---RRARPPLTEQIQIIRELWLLRESARVRAAEHRFVAQLGRLLGANAYSSPPPPLAHVSFVPVGGARVPTPPVAPXXXPLGRRSLWRNNDGGVFESQPQPRGDASPARERRAAFPEGIEVLRSRQPVTNLSAQFRARLEGGDTQHHPYRGIVRSHSFGQLSRQRAVSALLESEFRHQLEALISRGDTRPARTAPVQSQLDLDLDPSIPHTSHAELASLVKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAFIVTEAVAT 347
            MSQP +SP   RRAR    EQI+I+RELWLLRE +RVRAAE RFVA+L RLLG  AYSSPPPPL+HVSFV    A         XXX +  R+        VFES+P PRG++SP RERR A  +GIE+LR+RQPVTNL AQFRARLEG DT   P+  IVRS SFGQLSRQRAVS +LESEFRHQLEALISR D  P    P+Q  LDL+    I H SH+EL  LV+ LQQE+TVLKNVMSASFDLQLDIQRAIRQEVCAAM+ +  KQV DS SCAVQA + R  KAGACTVCLE +VDCVLYACGHMCTCSLCARQLLS+GQKCPICRAPVRDVVRAFIVTE  A+
Sbjct:    1 MSQPPQSPQPPRRARAQAGEQIRIVRELWLLRERSRVRAAERRFVAELERLLGRRAYSSPPPPLSHVSFVEPVSAVPXXXXXXXXXXXISARTRPTPLTPSVFESEPPPRGESSPVRERRGAAIDGIELLRARQPVTNLIAQFRARLEGDDTT-PPFNTIVRSRSFGQLSRQRAVSVMLESEFRHQLEALISRRDAAPPTQRPLQPPLDLETP--ITHPSHSELTGLVRALQQEVTVLKNVMSASFDLQLDIQRAIRQEVCAAMANSSAKQVPDSSSCAVQAASARAVKAGACTVCLENSVDCVLYACGHMCTCSLCARQLLSSGQKCPICRAPVRDVVRAFIVTETAAS 347          
BLAST of Ggra7322.t1 vs. uniprot
Match: R7QCK0 (RING-type domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCK0_CHOCR)

HSP 1 Score: 129 bits (324), Expect = 2.040e-33
Identity = 72/121 (59.50%), Postives = 83/121 (68.60%), Query Frame = 0
Query:  239 MSASFDLQLDIQRAIRQEVCAAMSRAG------VKQVADSPSCAVQA----------RTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAFIVTE 343
            M+ASFDLQLDIQR+IRQEV AAMS AG      V Q   S    ++           RT R   AG CTVCLE  +D +LY CGHMCTCS+C RQL+++GQ CPICRAPVRDVVRAF+VTE
Sbjct:    1 MAASFDLQLDIQRSIRQEVAAAMSSAGKGMGGGVVQETSSACTDMETEGATRVLRKERTARPVVAGVCTVCLEARIDSLLYGCGHMCTCSMCGRQLIASGQACPICRAPVRDVVRAFMVTE 121          
BLAST of Ggra7322.t1 vs. uniprot
Match: A0A7S1EPM1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPM1_9RHOD)

HSP 1 Score: 130 bits (327), Expect = 1.050e-31
Identity = 113/341 (33.14%), Postives = 162/341 (47.51%), Query Frame = 0
Query:   26 WLLRESARVRAAEHRFVAQLGRLLGANAYSSPPPPLAHVSFVPVGGARVPTPPVAPXXXPLGRR-SLW-RNNDGGVFESQPQPRGDASPARERRAAFPEGIEVLRSRQPVTN-LSAQFRARLEGG--DTQHHPYRGIVRSHSFGQL---------------SRQRAVSALLESEFRHQLEALISRGDTRPARTAPVQSQLDLDLDPSIPHTSHAELASLVKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMS-RAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAFIVTEAV 345
            WLLRE ARV+AAE +F+A+L  +L     ++      H+  +                 P+ R  S W R+N G      P+        RER    P     L  +  VTN L +QFR +LE    + Q     G+V    + +L                R+R V    E E  ++ +A +   +      + +Q +     D         E+   +++LQQE+ +LKNV++ASFD+QLD+QRAIRQEV A ++     +Q+  S         ER  + G C +C E   +CVLYACGHMC C+ CAR LLS G  CP+CRAPVRDVV  +   + V
Sbjct:    1 WLLREQARVQAAERQFLARLQAVLERARQNASGVNTGHMPHL---------------NNPVQRADSAWIRDNSGPAPLRSPEHE---LVGRERSWQAP-----LAEQHNVTNVLDSQFRHQLERVLVERQSDLRSGMVALPYYRRLHRLNNPYLPRNRDSEGRERLVDDTEEEEGMYEDDAEVDSFELDQTSGSAIQKRRGEGRDD--------EILQAIQSLQQEVQILKNVINASFDVQLDVQRAIRQEVAAGLNTNLTSRQINHS---------ER--RRGNCVICCEAATNCVLYACGHMCACAGCARSLLSTGHSCPMCRAPVRDVVVVYEADDTV 299          
BLAST of Ggra7322.t1 vs. uniprot
Match: A0A5J4Z8U4 (E3 ubiquitin-protein ligase NEURL1B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8U4_PORPP)

HSP 1 Score: 126 bits (316), Expect = 9.450e-29
Identity = 87/219 (39.73%), Postives = 117/219 (53.42%), Query Frame = 0
Query:  166 LSRQRAVSALLESEFRHQLEALISR-----GDT-------RPARTAPVQSQLDLDLDPSIPHTS---HAEL---------------ASLVKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGV---------KQVADSPSCAVQART------ERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAF 339
            L  QR V+  L+SEFRH+LE  +++      DT       R  R        +L+ D S P TS   H +L               AS+++ L+ EI  LKN++ ASFD+QLD+QRA+RQEV AAM  A            +   S    V   T       RV  +G C VC+E  +D V YACGH  TC+LCAR+LL++GQ CP+CRAP++DV+R F
Sbjct:  180 LHSQRNVTQALDSEFRHELEHALAQVSNMGRDTVMDLPYYRRRRRRRTHGAFELEEDLSEPITSEGEHEQLLRNADEVEHGIGRTPASVLEELKHEIETLKNMIHASFDVQLDVQRAVRQEVAAAMGGAAQYGGHGGSSSSRSGSSLDSQVMGPTFPGGHGGRVRTSGTCIVCIEAQIDSVFYACGHNATCTLCARKLLASGQPCPMCRAPIKDVIRVF 398          
BLAST of Ggra7322.t1 vs. uniprot
Match: uncharacterized protein LOC101846543 isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI00035964C6 (uncharacterized protein LOC101846543 isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI00035964C6)

HSP 1 Score: 125 bits (315), Expect = 1.580e-28
Identity = 79/209 (37.80%), Postives = 113/209 (54.07%), Query Frame = 0
Query:  165 QLSRQRAVSALLESEFRHQLEALI----SRGDTR-----------PARTAPVQSQLDLDLDP------------------SIPHT-SHAELASLVKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAF 339
            +L   R VS+ L+ EFR  LE L+    S   T            PA   P     DL + P                  S+P+T ++  L+  ++ L+ ++  +KN++  +FDLQ+DIQRAIRQEV AAMS+   +Q A   + AV   T+ V     C +CLE++ DCVLY CGHMC C +C R L+S    CP+CRAP++DV+RA+
Sbjct:  329 ELLHSRLVSSTLDGEFRATLELLVQDRVSSSGTNGQAVENFIRNLPASGVPRNDFTDLGIPPAQDLDNLDNVSVTNISAHSVPYTQTNTHLSREIQGLKSQMMEMKNMLKLTFDLQMDIQRAIRQEVAAAMSQFAAEQGASGGAAAVPVSTKPVNDTH-CLICLERHSDCVLYQCGHMCVCYVCGRDLVSRSLGCPVCRAPIKDVIRAY 536          
BLAST of Ggra7322.t1 vs. uniprot
Match: A0A7S0T6A0 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6A0_9RHOD)

HSP 1 Score: 124 bits (310), Expect = 4.520e-28
Identity = 62/112 (55.36%), Postives = 81/112 (72.32%), Query Frame = 0
Query:  225 VKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVV 336
            V+ L+ E+ VLKN++ ASFD+QLD+QRA+RQEV AAM +   +Q     +  V   + R+   G+C VC E  ++CVLYACGH C CS+CAR LLSAG +CP+CRAPVRDVV
Sbjct:  368 VEALKHEVHVLKNIVHASFDVQLDVQRAVRQEVAAAMLKTEQQQ----HNSTVVGHSPRMRSRGSCVVCCETAINCVLYACGHACACSVCARSLLSAGMQCPMCRAPVRDVV 475          
BLAST of Ggra7322.t1 vs. uniprot
Match: M2W0F8 (Protein binding protein / zinc ion binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W0F8_GALSU)

HSP 1 Score: 115 bits (287), Expect = 8.670e-26
Identity = 101/336 (30.06%), Postives = 150/336 (44.64%), Query Frame = 0
Query:   20 QIIRELWLLRESARVRAAEHRFVAQLGRLLGANAYSSPPPPLAHVSFVPVGGARVPTPPVAPXXXPLGRRSLWRNNDGGVFESQPQPRGDASPARER--RAAFPEGIEVLRSRQPVTNLSAQFRARLEGGDTQHHPYRGIVRSHSFG-----QLSRQRAVSALLESEFRHQLE-------ALISRGDTRP-----ARTAPVQSQLDL-------DLDPSIPHTSHAE------LASLVKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQ 323
            Q +R+LW+LRE ARVRA E RF+ QL  +L             H+  V                  L +    +N              +  P RER  R +    +++++  + VT LS ++R+ LEG            R   FG     Q+  Q+ VS  L S FRHQLE       ++ S    RP     + ++P +   +        D+  S      +E      L   +  LQ +I  +K+ M ASFDLQL+IQR +RQE+ A +     K V  S    +   ++ ++K G C VC +  +D +LY+CGHMCTC  C RQL++ GQ
Sbjct:   14 QRVRDLWVLREQARVRAVEFRFLRQLENILNQ-----------HILRV-----------YDKQDMNLNKEEETQNGKDSFVSIS-----NTGPTRERNYRHSLVSEVQMIQQSRLVTGLSEEYRSILEGNIVS------PSRQSWFGGDLWRQVIEQQTVSNALSSSFRHQLEFALLHSQSIHSSSTLRPFIVRDSHSSPRRRHQETTNWEDFSDIQDSTDEIELSETNYKDFLLDQMNKLQTDIQWIKSTMQASFDLQLEIQREVRQEIAAVLHDCNSKTVETS----LAFHSQSISK-GTCIVCAQNVIDSLLYSCGHMCTCCYCGRQLIATGQ 311          
BLAST of Ggra7322.t1 vs. uniprot
Match: A0A0B7AVC5 (RING-type domain-containing protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7AVC5_9EUPU)

HSP 1 Score: 110 bits (276), Expect = 1.590e-25
Identity = 57/129 (44.19%), Postives = 88/129 (68.22%), Query Frame = 0
Query:  212 SIPHT-SHAELASLVKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAF 339
            S+P T ++  L   +++L+ ++  +K+++  +FDLQ+D+QRAIRQEV AAM+   V Q A   S +V   +  V+    C +CL+++ D VLY CGHMC C +C R L+S G KCP+CRAP++DV+RA+
Sbjct:   60 SVPFTQTNTYLGREIQSLKSQMNEMKSMIKMTFDLQMDMQRAIRQEVAAAMNNC-VAQGATGCSTSVPRPSSAVSDTH-CLICLDRHTDTVLYQCGHMCVCFVCGRDLMSRGHKCPVCRAPIKDVIRAY 186          
BLAST of Ggra7322.t1 vs. uniprot
Match: uncharacterized protein LOC100366774 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001D3A15A (uncharacterized protein LOC100366774 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001D3A15A)

HSP 1 Score: 115 bits (289), Expect = 7.380e-25
Identity = 73/201 (36.32%), Postives = 106/201 (52.74%), Query Frame = 0
Query:  161 HSFGQLSRQRAVSALLESEFRHQLEALISR--GDTRPARTAPVQSQLDLDLDPSIPHT----SHA--------ELASLVK--------TLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAF 339
            H    L  +R VS  L+S+FR  LE  +     ++    T    +     L  S PH     SH          +A+  +        +L+QE+  LK+++  +F++QLDIQRAIRQEV AA+S   +    +   C+  + + +V K G C +CL++ VD VLY CGHMC C+ C   L   G  CPICRAP+RDV+RA+
Sbjct:  404 HEISDLVHRRLVSQTLDSDFRGHLEIRMQNHLAESTGTETGSQVADFIQSLHSSTPHRRNDFSHLGIHSPDTDNIAAAAQGNMNPNFVSLKQELEELKSMVRMNFEMQLDIQRAIRQEVAAALST--IAGGTNQQQCSAHSTSSQVIKNGNCLICLDRAVDSVLYQCGHMCVCTTCGLNLQGQGLHCPICRAPIRDVIRAY 602          
BLAST of Ggra7322.t1 vs. uniprot
Match: uncharacterized protein LOC117339184 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581AEA (uncharacterized protein LOC117339184 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581AEA)

HSP 1 Score: 114 bits (286), Expect = 8.950e-25
Identity = 81/246 (32.93%), Postives = 129/246 (52.44%), Query Frame = 0
Query:  133 VTNLSAQFRARLEGGDTQHHPYRGIVRSHSFGQLSRQRAVSALLESEFRHQLEA-----LISRG-----------DTRPAR--------------TAPVQSQLDLDLDP----SIPHTSHAELASL-VKTLQQEITVLKNVMSASFDLQLDIQRAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDCVLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAFIVTE 343
            V N   Q   RL G D +   +  +V+  S  +L   R VS+ L+ +FR +LE      L S G           +  P++               AP  +  ++ +      ++P+T  +   S  +++L+ ++  +KN+M  SFDLQ+DIQR+IRQEV AAM+   VK+   + +  V A+++ V +   C +CL+ + D VLY CGHMC C  C R L+  G KCP+CRAP++D++RA+   E
Sbjct:  242 VRNPIPQTYGRLLGYDWEDRHHEDVVQEIS--ELVHSRIVSSTLDGDFRTRLEISMQERLASSGFDGSRVQEFVQNINPSQPIERNDFSNLGINVNAPTDNWDNISVTSVSAHAVPYTQSSRYMSREIQSLKAQLMEMKNMMKLSFDLQMDIQRSIRQEVAAAMN--DVKRADGNTALPVAAKSKPVNETH-CLICLDNHSDSVLYQCGHMCVCFTCGRNLMERGSKCPVCRAPIKDIIRAYRCNE 482          
The following BLAST results are available for this feature:
BLAST of Ggra7322.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1582.400e-14869.14Protein neuralized n=1 Tax=Gracilariopsis chorda T... [more]
R7QCK02.040e-3359.50RING-type domain-containing protein n=1 Tax=Chondr... [more]
A0A7S1EPM11.050e-3133.14Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z8U49.450e-2939.73E3 ubiquitin-protein ligase NEURL1B n=1 Tax=Porphy... [more]
uncharacterized protein LOC101846543 isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI00035964C61.580e-2837.80uncharacterized protein LOC101846543 isoform X1 n=... [more]
A0A7S0T6A04.520e-2855.36Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
M2W0F88.670e-2630.06Protein binding protein / zinc ion binding protein... [more]
A0A0B7AVC51.590e-2544.19RING-type domain-containing protein n=1 Tax=Arion ... [more]
uncharacterized protein LOC100366774 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001D3A15A7.380e-2536.32uncharacterized protein LOC100366774 n=1 Tax=Sacco... [more]
uncharacterized protein LOC117339184 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI0014581AEA8.950e-2532.93uncharacterized protein LOC117339184 n=1 Tax=Pecte... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 265..341
e-value: 1.6E-15
score: 58.2
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 288..335
e-value: 1.3E-13
score: 50.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..121
NoneNo IPR availablePANTHERPTHR46519:SF2RING/U-BOX SUPERFAMILY PROTEINcoord: 221..341
NoneNo IPR availablePANTHERPTHR46519RING/U-BOX SUPERFAMILY PROTEINcoord: 221..341
NoneNo IPR availableCDDcd16647mRING-HC-C3HC5_NEU1coord: 290..329
e-value: 9.03236E-17
score: 71.1742
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 283..334
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 290..329
score: 11.22052

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:768463..769596 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7322.t1Ggra7322.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 768463..769596 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7322.t1 ID=Ggra7322.t1|Name=Ggra7322.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=348bp
MSQPSESPRRARPPLTEQIQIIRELWLLRESARVRAAEHRFVAQLGRLLG
ANAYSSPPPPLAHVSFVPVGGARVPTPPVAPPPPPLGRRSLWRNNDGGVF
ESQPQPRGDASPARERRAAFPEGIEVLRSRQPVTNLSAQFRARLEGGDTQ
HHPYRGIVRSHSFGQLSRQRAVSALLESEFRHQLEALISRGDTRPARTAP
VQSQLDLDLDPSIPHTSHAELASLVKTLQQEITVLKNVMSASFDLQLDIQ
RAIRQEVCAAMSRAGVKQVADSPSCAVQARTERVAKAGACTVCLEKNVDC
VLYACGHMCTCSLCARQLLSAGQKCPICRAPVRDVVRAFIVTEAVAT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING