Ggra7315.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7315.t1
Unique NameGgra7315.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length171
Homology
BLAST of Ggra7315.t1 vs. uniprot
Match: A0A2V3J139 (39S ribosomal protein L11, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J139_9FLOR)

HSP 1 Score: 261 bits (668), Expect = 2.750e-87
Identity = 132/154 (85.71%), Postives = 140/154 (90.91%), Query Frame = 0
Query:    1 MARRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEVEKPTEKQKASG 154
            M+RRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATA YVDGTPLTTKVTAYTDRSASFKIRSPPV YLLKKAAGV KGA++PG+EVVGSVSLKH+YEIA LKQ D HLSHLSLE LC+ IMTTA +CGI V + TE QKA G
Sbjct:    1 MSRRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAHYVDGTPLTTKVTAYTDRSASFKIRSPPVSYLLKKAAGVDKGANNPGNEVVGSVSLKHIYEIAVLKQKDHHLSHLSLEALCRCIMTTAKTCGIAVARATESQKALG 154          
BLAST of Ggra7315.t1 vs. uniprot
Match: R7QLR4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLR4_CHOCR)

HSP 1 Score: 243 bits (619), Expect = 6.030e-74
Identity = 120/146 (82.19%), Postives = 133/146 (91.10%), Query Frame = 0
Query:    1 MARRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEVEKP 146
            MA RVVKQV+K TLPAG+AAP+PPVGPRLGQMGVNIMQFCKDFNAATA YVDGTPLTTKV AYTDRS++FKIRSPPV +LLK AAGV KGA+SPGH+V GSVSLKHVYEIAK+KQ D HLSHLSLE LCKSI++TA +CGIEV+ P
Sbjct:  488 MAARVVKQVIKMTLPAGQAAPSPPVGPRLGQMGVNIMQFCKDFNAATAVYVDGTPLTTKVIAYTDRSSAFKIRSPPVSFLLKSAAGVKKGATSPGHDVAGSVSLKHVYEIAKIKQKDRHLSHLSLEMLCKSIISTAKTCGIEVQGP 633          
BLAST of Ggra7315.t1 vs. uniprot
Match: A0A1X6NU17 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU17_PORUM)

HSP 1 Score: 186 bits (471), Expect = 1.620e-57
Identity = 93/142 (65.49%), Postives = 111/142 (78.17%), Query Frame = 0
Query:    4 RVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEV--VGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEV 143
            RVVKQ++K T+PAG+AAP+PPVGPRLGQMGVNIM FCKDFNA+TAQY  G PLTTK+ AYTDR+ +F  R+PPV  LL   AGV KGASSPG     VG+VSLK VY IA +K  D+HL+H+ L  +CKSI+ TA SCG+ V
Sbjct:    7 RVVKQIVKMTVPAGQAAPSPPVGPRLGQMGVNIMSFCKDFNASTAQYRPGLPLTTKIVAYTDRTCTFTTRTPPVSALLLGVAGVAKGASSPGKSAAPVGTVSLKQVYAIATIKTGDLHLAHVPLRSMCKSIIGTARSCGLAV 148          
BLAST of Ggra7315.t1 vs. uniprot
Match: A0A7S1T4C2 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T4C2_9RHOD)

HSP 1 Score: 186 bits (472), Expect = 2.100e-57
Identity = 87/140 (62.14%), Postives = 109/140 (77.86%), Query Frame = 0
Query:    4 RVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEV 143
            + VK  ++ T+ AGKAAP+PPVGPRLGQ+G NIMQFCKDFNAATA YV+G P+TT +TAY DRS  F   SPPV +LLK+ AGV KG + PG  +VGSV ++ VYEIA++KQ D HL H+ LE LCKSI+ TA +CG++V
Sbjct:   15 KAVKATVRMTIAAGKAAPSPPVGPRLGQLGANIMQFCKDFNAATADYVEGVPVTTTITAYEDRSVDFSFCSPPVSFLLKQVAGVAKGTAEPGRVMVGSVPIQAVYEIARIKQQDEHLRHVPLEGLCKSILGTATTCGLQV 154          
BLAST of Ggra7315.t1 vs. uniprot
Match: M2XF01 (50S ribosomal protein L11 (Mitochondrial) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XF01_GALSU)

HSP 1 Score: 174 bits (440), Expect = 7.570e-53
Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 0
Query:    6 VKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEVE 144
            +K  L   +PAGKAAP PPVGPR+GQMG+NIMQFCKDFN AT   ++G P+ TK+ AY DR+ +F+ R+PPV Y LK+ AG+ K AS PGHE +G V LK +YEI K+KQ D H+ + SLE +C+SI  TA   G+EVE
Sbjct:    9 IKISLLMNIPAGKAAPGPPVGPRIGQMGLNIMQFCKDFNNATKDILEGVPIPTKIVAYNDRTYTFETRTPPVSYFLKRVAGLEKAASKPGHETIGKVPLKAIYEIGKIKQRDEHMKYKSLEIICRSIYATAKGMGLEVE 147          
BLAST of Ggra7315.t1 vs. uniprot
Match: A0A4Q9P2H2 (Mitochondrial ribosomal protein L11 n=2 Tax=Dichomitus squalens TaxID=114155 RepID=A0A4Q9P2H2_9APHY)

HSP 1 Score: 164 bits (415), Expect = 4.890e-49
Identity = 78/136 (57.35%), Postives = 98/136 (72.06%), Query Frame = 0
Query:    8 QVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEV 143
            Q ++  +PAGKAAP+PPVGP LG  GV  M FCK+FNA TA    G P+ T++    DRS SF  ++PP  Y LKKAAG+ KG   PGH++VG+VSLKHVYEIAK+KQ D HL HLSLE + KS++ TA + GI+V
Sbjct:   11 QFIRLLIPAGKAAPSPPVGPALGARGVKSMDFCKEFNARTAHVEPGIPIPTRILVQPDRSFSFITKTPPTAYFLKKAAGIEKGTGRPGHDIVGTVSLKHVYEIAKIKQSDAHLKHLSLEKISKSVIGTARTIGIQV 146          
BLAST of Ggra7315.t1 vs. uniprot
Match: A0A0N7IMX0 (Mitochondrial 54S ribosomal protein L19 n=1 Tax=Irpex lacteus TaxID=5319 RepID=A0A0N7IMX0_IRPLA)

HSP 1 Score: 163 bits (413), Expect = 9.850e-49
Identity = 76/142 (53.52%), Postives = 99/142 (69.72%), Query Frame = 0
Query:    2 ARRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEV 143
            A +V  Q+++  +PAGKAAP PPVGP LG  GV  M FCK+FNA TA    GTP  T +T   DR+ +F  ++PP  Y LKKAAG+ KG   PGHE+VG+VSLKH+YEIAK+KQ D HL HL LE +  +++ TA + G++V
Sbjct:    5 AAKVQAQIVRILIPAGKAAPTPPVGPALGARGVKSMDFCKEFNARTAHIEPGTPTPTLITVQPDRTFTFITKTPPTTYFLKKAAGIEKGTGKPGHEIVGTVSLKHIYEIAKVKQTDEHLKHLRLEAIASTVVATAKTLGVQV 146          
BLAST of Ggra7315.t1 vs. uniprot
Match: A0A7J7IQC5 (54S ribosomal protein L11, mitochondrial n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQC5_9RHOD)

HSP 1 Score: 164 bits (416), Expect = 9.940e-49
Identity = 81/141 (57.45%), Postives = 105/141 (74.47%), Query Frame = 0
Query:    4 RVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGS-VSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEV 143
            + V+Q LK  LPAGKAAP PP+GPRLGQ+G+NIMQFCK+FN +TA   +G P+ T +TAYTDRS  F+ R PPV + L++ AGV KG+S+PG   VG  V+L  VYE+A++KQ D +L + SLE LCKSI+ TA S GI +
Sbjct:   17 KAVRQRLKMLLPAGKAAPGPPIGPRLGQVGLNIMQFCKEFNQSTAAIEEGVPIPTLITAYTDRSFVFETRKPPVSFFLRRLAGVEKGSSNPGRTFVGEPVTLSAVYELAQIKQQDANLRYTSLESLCKSIIGTARSMGIRI 157          
BLAST of Ggra7315.t1 vs. uniprot
Match: A0A6I9R623 (54S ribosomal protein L19, mitochondrial n=4 Tax=commelinids TaxID=4734 RepID=A0A6I9R623_ELAGV)

HSP 1 Score: 163 bits (413), Expect = 1.190e-48
Identity = 78/145 (53.79%), Postives = 102/145 (70.34%), Query Frame = 0
Query:    1 MARRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGSVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEVEK 145
            +ARR +   ++ T+PAG A PAPPVGP LGQ  +N+M FCKDFNA T +Y   TP+   +TAY D +  F ++SP V + LKKAAG+  G+S PGH VV S+ L+HVYEIAK+KQ D    H+S+E +CKSI+ TA S GI+V K
Sbjct:    8 VARRPIAATIRLTVPAGGARPAPPVGPALGQYRLNLMAFCKDFNARTQKYKPDTPMAVTITAYKDNTFEFTVKSPSVTWFLKKAAGIESGSSRPGHVVVSSIMLRHVYEIAKVKQSDPFCQHMSIEAICKSIIGTANSMGIQVVK 152          
BLAST of Ggra7315.t1 vs. uniprot
Match: M1VMM1 (Mitochondrial ribosomal protein L11 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VMM1_CYAM1)

HSP 1 Score: 163 bits (413), Expect = 2.750e-48
Identity = 85/163 (52.15%), Postives = 112/163 (68.71%), Query Frame = 0
Query:    2 ARRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQYVDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVGS-VSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEV------EKPTEKQKASGLRD 157
            A +V++Q ++  LPAGKAAP PPVGPRLGQ GVNI QFCK+FN ATA   DG P+ T + AYTDRS SF+ R PPV + L++ AGV KG+S PG   VG  V L  VYE+A++KQ D +L  +SL+ LCKSI+ TA S G+ +      E+P   +++S  +D
Sbjct:   15 APKVLRQRMRMLLPAGKAAPGPPVGPRLGQAGVNIAQFCKEFNQATANLEDGVPIPTLIAAYTDRSFSFETRQPPVSFFLRRLAGVEKGSSQPGRSFVGQPVPLTAVYELARIKQKDDNLRTVSLQALCKSIIGTARSMGVRIVDDRVLEQPANNKESSPGKD 177          
The following BLAST results are available for this feature:
BLAST of Ggra7315.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1392.750e-8785.7139S ribosomal protein L11, mitochondrial n=1 Tax=G... [more]
R7QLR46.030e-7482.19Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NU171.620e-5765.49Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1T4C22.100e-5762.14Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XF017.570e-5357.5550S ribosomal protein L11 (Mitochondrial) n=1 Tax=... [more]
A0A4Q9P2H24.890e-4957.35Mitochondrial ribosomal protein L11 n=2 Tax=Dichom... [more]
A0A0N7IMX09.850e-4953.52Mitochondrial 54S ribosomal protein L19 n=1 Tax=Ir... [more]
A0A7J7IQC59.940e-4957.4554S ribosomal protein L11, mitochondrial n=1 Tax=C... [more]
A0A6I9R6231.190e-4853.7954S ribosomal protein L19, mitochondrial n=4 Tax=c... [more]
M1VMM12.750e-4852.15Mitochondrial ribosomal protein L11 n=1 Tax=Cyanid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 10..144
e-value: 1.8E-61
score: 220.2
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 5..151
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 6..145
score: 25.352005
IPR000911Ribosomal protein L11/L12CDDcd00349Ribosomal_L11coord: 25..143
e-value: 8.35587E-53
score: 162.62
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 5..145
e-value: 1.8E-50
score: 168.5
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 5..82
e-value: 9.0E-32
score: 110.5
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 6..73
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 83..148
e-value: 3.1E-25
score: 89.8
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 69..144
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 11..68
e-value: 9.2E-25
score: 86.2
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 73..143
e-value: 6.4E-27
score: 93.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..170
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 5..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:735701..736213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7315.t1Ggra7315.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 735701..736213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7315.t1 ID=Ggra7315.t1|Name=Ggra7315.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=171bp
MARRVVKQVLKFTLPAGKAAPAPPVGPRLGQMGVNIMQFCKDFNAATAQY
VDGTPLTTKVTAYTDRSASFKIRSPPVPYLLKKAAGVGKGASSPGHEVVG
SVSLKHVYEIAKLKQMDVHLSHLSLECLCKSIMTTAWSCGIEVEKPTEKQ
KASGLRDEEGLAANEANALQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR006519Ribosomal_L11_bac-typ
IPR036796Ribosomal_L11/L12_N_sf
IPR036769Ribosomal_L11_C_sf
IPR020784Ribosomal_L11_N
IPR020783Ribosomal_L11_C