Ggra7314.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7314.t1
Unique Name	Ggra7314.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	450

Homology

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BLAST of Ggra7314.t1 vs. uniprot
Match: A0A2V3J425 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J425_9FLOR)

HSP 1 Score: 336 bits (862), Expect = 3.760e-108
Identity = 184/281 (65.48%), Postives = 230/281 (81.85%), Query Frame = 0

Query:  169 PFNAPEARCSTCQALRNDNNRLTRLVARLRMRIIEVRATSETHGQRLLRAAYQDRMREMNNEHAQKTAEMLNKQKACFEEELEALEKESHAAIHTLHIQLERERMEKEKLRRAFENERDEAIEKTNITMQAVQRKMAHLHAKVIRVERENAVLSTSQKEKQVMVEVLASATAARDVERRERELILRAEQEERNRKNLLIDSMHAEIKQLRARLFEESEGRRALLSKIEELHDDKEGEKEKHAEDLADCKKQSKKENDRLGRLFASVIQDFANVQSDVSTND 449
            PF  P+  C+ C  +  +N+RL RLVARLR R+ E   T++THGQRLLRAA QDR+RE+ NEHAQ+T E+LN+QKACFEEELEA+EKESHAAI+ L +Q++ ER EKE ++R F+ ERD A+EKTN  MQAVQRK+AHLHAK  R+ERE A LS +  EKQVMVEVLASA AARD +R++REL+ +AE+EER+RKN LIDSM  EIKQLRARL EE++  ++LL KIE +H +++ EKE+HA+D+ DCK QS+KE DRLGRLFASV+QD+ANVQSDVSTND
Sbjct:  175 PFG-PDPNCARCHTISAENDRLHRLVARLRFRLYEALETAQTHGQRLLRAACQDRIREITNEHAQQTTEILNRQKACFEEELEAMEKESHAAINDLQVQVQHERFEKEHMKRVFQRERDAALEKTNSIMQAVQRKIAHLHAKATRLEREKATLSAAHNEKQVMVEVLASAAAARDADRQKRELLSKAEEEERSRKNALIDSMQGEIKQLRARLEEEAQRSKSLLDKIEAMHLERDDEKERHAQDIVDCKTQSQKEEDRLGRLFASVLQDYANVQSDVSTND 454

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BLAST of Ggra7314.t1 vs. uniprot
Match: R7QPX2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPX2_CHOCR)

HSP 1 Score: 239 bits (609), Expect = 1.160e-70
Identity = 138/269 (51.30%), Postives = 195/269 (72.49%), Query Frame = 0

Query:  174 EARCSTCQALRNDNNRLTRLVARLRMRIIEVRATSETHGQRLLRAAYQDRMREMNNEHAQKTAEMLNKQKACFEEELEALEKESHAAIHTLHIQLERERMEKEKLRRAFENERDEAIEKTNITMQAVQRKMAHLHAKVIRVERENAVLSTSQKEKQVMVEVLASATAARDVERRERELILRAEQEERNRKNLLIDSMHAEIKQLRARLFEESEGRRALLSKIEELHDDKEGEKEKHAEDLADCKKQSKKENDRLGRLFASVIQDFANVQ 442
            +A C  C  L  +N+ LTR VARLR R+ +    S+THGQRLLRAAYQ++++E++ EHA +T E+LN QK CFE+ELEALE ES AAI++L  + + ER  + +  + +  ER  A++KT  TM AVQRKMA LHA+  R+ER+N  L+ +  EKQ+MVEVLASA AA+DVERR  +L+ R ++EERNRK+ LI ++ AE+  LR  L ++ +    L +++EEL  +++G++++  +DL DCK+Q KKE+DRLGRLF S+IQDFA VQ
Sbjct:  156 DAVCHQCAQLCEENDSLTRRVARLRQRLRDSFEQSQTHGQRLLRAAYQEKIQELSMEHAHRTTEVLNMQKQCFEQELEALESESQAAINSLTRERDAEREARVREEQGYRRERQLALDKTTATMIAVQRKMAQLHARATRLERDNKNLTAALIEKQIMVEVLASAAAAKDVERRRLDLLSRTQEEERNRKDSLIAALQAEVGHLREELVQDQQANNILAAQVEELKGERDGDRQRMEKDLDDCKQQQKKESDRLGRLFTSMIQDFATVQ 424

The following BLAST results are available for this feature:

BLAST of Ggra7314.t1 vs. uniprot

BLAST of Ggra7314.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J425	3.760e-108	65.48	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QPX2	1.160e-70	51.30	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 180..200
None	No IPR available	COILS	Coil	Coil	coord: 341..361
None	No IPR available	COILS	Coil	Coil	coord: 388..412
None	No IPR available	COILS	Coil	Coil	coord: 297..317
None	No IPR available	COILS	Coil	Coil	coord: 217..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 399..419
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..143

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000871_pilon	contig	tig00000871_pilon:731964..733313 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7314.t1	Ggra7314.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000871_pilon 731964..733313 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7314.t1 ID=Ggra7314.t1|Name=Ggra7314.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=450bp
MQTLAPCEGPQSPVLTSLREVPKRPRPFVYSSSAVMPVTETRLVADDGFG
GTSSVSEASDSSPPPKSEDDEHEHLPPPSENIPVTPQAHFEDESIDSENS
EPRQSISLESSPLSDTSMISQSTMEDTNEPQIPDNVPEQTGQGLALDATE
LRSALNSITQASAPDLAPPFNAPEARCSTCQALRNDNNRLTRLVARLRMR
IIEVRATSETHGQRLLRAAYQDRMREMNNEHAQKTAEMLNKQKACFEEEL
EALEKESHAAIHTLHIQLERERMEKEKLRRAFENERDEAIEKTNITMQAV
QRKMAHLHAKVIRVERENAVLSTSQKEKQVMVEVLASATAARDVERRERE
LILRAEQEERNRKNLLIDSMHAEIKQLRARLFEESEGRRALLSKIEELHD
DKEGEKEKHAEDLADCKKQSKKENDRLGRLFASVIQDFANVQSDVSTND*