Ggra7311.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7311.t1
Unique NameGgra7311.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1240
Homology
BLAST of Ggra7311.t1 vs. uniprot
Match: A0A2V3J142 (DNA-directed RNA polymerase subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J142_9FLOR)

HSP 1 Score: 1918 bits (4969), Expect = 0.000e+0
Identity = 950/1206 (78.77%), Postives = 1062/1206 (88.06%), Query Frame = 0
Query:   36 RNDIQPSTLPGGSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRVSIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRENERRAERKTNTSVS-GEDLLSLVKESLKKAIHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSSTAVVTHGSAARREEIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKAEVIYVPPGDVKT-FQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMRGATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRFIRLTEEETETLKTVDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGPSRRKSEPIIECRICERDGRESIIEKIAMPYSFKYLTNELAAMNIRTVFALKEVL 1239
            R  IQPSTLP GS DE H+FLK CVA H+ESFDF I EGLHLITEE+DP++FRGP+ E+GK + +SIR+++LSIQKPR+NL+G GKVS +R + PSEC+R  ATY G+LYG FT+TYG  +KV I SQRIARIPIMV S+ACHLRG SR+EL   GEEE+EAGG+FIVNG E+VIRLVVVPRSNH ISA R ANE RGAMF++LSLS+RSMRRDL+TFT H H+ RSGAVRVRVTIN+NEYFIPAGVLLR FLPSETTDREIYELIVG   +N AL N+AIAIIKELSERS++FR+KD EP + P VSR AA +YLGRSFRAII +DDEDTSN EAGIAFLRKYIFVHLSVG YE  +ES DRSKADLLVLLIRKL  T+T D++VDNQDA SHQSVMTPGQLYL LLKEKLEGLLR+V + +     R  E+K  TS S G+ L SLV ESL  AI SD++S+HM YLLSTGTLL+SSGLD+PQ  GYSV+AERIN+LRFI+ FRA+HRGTFYA+MRSVSVRKLLPEAWGFICPVHTPDGDPCGILNH+SSTAV+T GS A+RE+I DLFSDFNITPAPALSAAH I P   IPV+VDGR++GFVEE SA+EL  Q+RY+KIR AV  LS KAE+I +P    K+ FQ G+YIHTC GRLMRPVKWLA+ A KN  V D+  GLDEWIGTMEQVFLRIRPSVDNQ NSVNPI M  ATHAE+SP SFLSVLASLSPFPEMNQGPRNMFQCQMAKQ+MGTPCHAIWNRMDAKVYRLT+PQVPITR+ CMQDPMGADL+PNG+NAV+AVISYTGNDMEDALVINKASLERGFAHGTVYVN RINLD  GGG+D++FI LTEEET+TLKTVD+DGLP+VGARVS GSALYG+ S HGS NSS+ +WTKYKSVE+GT+DEV IYDSDMYRNTKG RGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSA+WP EDMPFSESGM PDILFNPNGFPSRMTIGMMVE+MSGKAGALHG FNDSS FQFDE+HRAID+FAEQL KAGYEHAGNETLYSGYTGEPFEV++FTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGL+AHGASFLLRDRLAMASDMH+VRVC+ CGSLLGP+ RK+E  + CR C  +GR+ +IE+I+MPYSFKYLTNELAAMNIRT+F+LKEV+
Sbjct:   24 RESIQPSTLPLGSADEHHQFLKSCVAPHVESFDFVIGEGLHLITEEIDPLIFRGPTKEDGKGEHISIRINHLSIQKPRVNLEGPGKVSNKRRIYPSECKRARATYQGELYGAFTVTYGKEEKVHIPSQRIARIPIMVNSIACHLRGMSREELVAQGEEEFEAGGTFIVNGGERVIRLVVVPRSNHAISAVRRANENRGAMFSDLSLSYRSMRRDLTTFTAHLHIFRSGAVRVRVTINRNEYFIPAGVLLRAFLPSETTDREIYELIVGEHSRNIALSNAAIAIIKELSERSIYFRKKDTEPGMKPMVSRTAATAYLGRSFRAIIEFDDEDTSNLEAGIAFLRKYIFVHLSVGAYEAPSESLDRSKADLLVLLIRKLVSTSTGDIEVDNQDATSHQSVMTPGQLYLSLLKEKLEGLLRKVRATV----VRLGEKKRGTSYSSGQALHSLVTESLTNAIRSDLISQHMNYLLSTGTLLKSSGLDLPQTQGYSVVAERINFLRFISHFRAVHRGTFYASMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHMSSTAVITQGSMAKREDIVDLFSDFNITPAPALSAAHAISPLGAIPVVVDGRLIGFVEETSAQELADQIRYTKIRTAVESLSTKAEIILIPETHEKSGFQSGIYIHTCAGRLMRPVKWLAEIASKNISVNDDTCGLDEWIGTMEQVFLRIRPSVDNQTNSVNPIDMEAATHAEISPVSFLSVLASLSPFPEMNQGPRNMFQCQMAKQTMGTPCHAIWNRMDAKVYRLTHPQVPITRSACMQDPMGADLYPNGVNAVVAVISYTGNDMEDALVINKASLERGFAHGTVYVNTRINLDTMGGGKDTKFIPLTEEETDTLKTVDRDGLPIVGARVSLGSALYGVCSRHGSANSSDAQWTKYKSVEDGTIDEVTIYDSDMYRNTKGMRGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSAAWPSEDMPFSESGMTPDILFNPNGFPSRMTIGMMVEIMSGKAGALHGQFNDSSAFQFDEDHRAIDFFAEQLTKAGYEHAGNETLYSGYTGEPFEVSIFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLLAHGASFLLRDRLAMASDMHVVRVCSTCGSLLGPTHRKTEGDVICRSCVAEGRDGVIERISMPYSFKYLTNELAAMNIRTIFSLKEVM 1225          
BLAST of Ggra7311.t1 vs. uniprot
Match: R7Q7W5 (DNA-directed RNA polymerase subunit beta n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7W5_CHOCR)

HSP 1 Score: 1570 bits (4066), Expect = 0.000e+0
Identity = 780/1223 (63.78%), Postives = 952/1223 (77.84%), Query Frame = 0
Query:   38 DIQPSTLPGGSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRVSIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRE------------NERRAERKTNTSVSGEDLLSLVKESLKKAIHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSSTAVVTHGSAARREEIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKAEVIYVPPGDVKT-FQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMRGATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRFIRLTEEETETLKTVDQDGLPVVGARVSQGSALYGI-GSIHGSTN--SSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGPSRRKSEPI-----IECRICERDGRESIIEKIAMPYSFKYLTNELAAMNIRTVFALKEVL 1239
            +IQPSTLP   +D+R  FL+RCVA H++SFDFAI  GL  +++EL+P++ RGP+D+NGKS  +S+R H+LS++KP ++           ++ P +CRR  ++Y+G+L+G FT+     +   +  QRI R+PIMV S ACHL+GKSR EL  LGEEEYE GG F++NG+EKV+RLVVVPRSNH +SA RD N GRG +FT+LSLS+RSMRRDLSTFTLH HLLRSG VR+RVTI ++EYFIP GV  R  L + TTDREIY+LIVGG+  + AL N+AIAIIKELSERS  FR +DAEP +   +S++AA +YLG+SFRA++G +DE  S+ EAG+AFLR++I VHLSVGCYE  +++ DRSK DL+VLL+RKL  T+T D++VD+ DALSHQS+M PGQLYL LLKEK+E L+R  AS +RRE            N +RA R T TS  G  L   +KE++K+A+ +D +S HM YLL+TG +   +GLD+PQ +GYSVIAERIN+LRFI+ FRA+HRG FYA MRS  VRKLLPEAWGFICPVHTPDGDPCGILNHL++ AVVT G  A + +I  LFSDFN  PAPALS+ H +PP+  +PV+VDGR+ G+V E SAEEL  Q+RY+KIR  V ++S  +EV+YV     K  F PG+Y+HT  GRLMRPVKWL      N   + + +G  EWIG++EQVFLR+RPSV  +  S+ PI   GATHAEVS  SFLSVLASLSPFP+MNQGPRNMFQCQMAKQ+MGTPCH  W+R D+KVYR T PQVPITR  CMQDPMGAD++PNG+NAV+AVISY+GNDMEDALVINK SL+RGFAHGTVYVN +I+LD    GR+  F  L  E  E + +VD DGLP VG+RV +GS LYGI G  H S       T+WT+YK  E+GTVDEV++ D DMY++ +  RGPGIR+AN+R R SR PCVGDKFASRAGQKGTMSA+WP EDMPFSESGM+PDILFNPNGFPSRMTIGMMVE+MSGKAGALHG FNDS+PF+FDE HRA+D+FAEQL  AG++  G+E LYSGYTGEPF+VN+FTGVVHYQRLRHMV DKFQVRTTG + PLFRQPIKGR +GGAIRFGEMERDGLIAHGASFLLRDRLAMASDMH++ VC  CGSL+ P+ + SE       I CR C   G+ES + ++A+PYS KYLTNELAAMNIRTVF LKEV+
Sbjct:   28 EIQPSTLPLEKDDDRVAFLRRCVAPHVDSFDFAIGSGLMHLSQELEPIIVRGPADKNGKSVHISLRAHSLSVRKPSISTSSGTTSGISMHLYPFQCRRASSSYVGELFGAFTVVLDKEESFELPIQRIGRVPIMVGSTACHLKGKSRSELVALGEEEYEVGGYFVINGSEKVMRLVVVPRSNHAVSARRDKNSGRGPLFTDLSLSYRSMRRDLSTFTLHFHLLRSGTVRIRVTIARSEYFIPIGVAFRAILSTGTTDREIYDLIVGGERDDNALRNAAIAIIKELSERSHEFRHRDAEPNVKASLSKSAATAYLGKSFRAVMGLNDELVSDHEAGVAFLRRFILVHLSVGCYENPDDALDRSKVDLMVLLVRKLVSTSTGDIEVDDADALSHQSLMPPGQLYLSLLKEKVESLVRIAASYIRREAIKGTDRDKRKVNGKRASRSTKTS--GPVLKIFIKEAIKRAVATDQLSTHMSYLLATGNIKTDTGLDLPQAVGYSVIAERINFLRFISHFRAVHRGAFYALMRSTKVRKLLPEAWGFICPVHTPDGDPCGILNHLAAEAVVTQGMGADKRDILHLFSDFNFYPAPALSSLHSVPPKDALPVVVDGRVFGYVREESAEELAEQIRYTKIRDMVPIVSNMSEVVYVRRIKAKAGFAPGIYVHTTSGRLMRPVKWLQSPRNTNLGGEQDPVGFPEWIGSLEQVFLRVRPSVQEEEGSLRPIQTDGATHAEVSSVSFLSVLASLSPFPDMNQGPRNMFQCQMAKQTMGTPCHTTWSRHDSKVYRHTTPQVPITRNFCMQDPMGADVYPNGVNAVVAVISYSGNDMEDALVINKGSLDRGFAHGTVYVNEKIDLDRSIDGREKTFATLPIEAVEEMDSVDMDGLPRVGSRVKKGSPLYGICGKDHLSRGLLDHKTQWTRYKYQEDGTVDEVVVVDPDMYKHKRTPRGPGIRQANVRIRVSRTPCVGDKFASRAGQKGTMSAAWPSEDMPFSESGMVPDILFNPNGFPSRMTIGMMVEIMSGKAGALHGHFNDSTPFRFDESHRAVDFFAEQLLNAGFDACGSEVLYSGYTGEPFKVNIFTGVVHYQRLRHMVSDKFQVRTTGAIDPLFRQPIKGRSRGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHLLHVCETCGSLVSPTMKVSEEAADSSHIYCRECV--GKESQVLRVAIPYSMKYLTNELAAMNIRTVFKLKEVI 1246          
BLAST of Ggra7311.t1 vs. uniprot
Match: A0A6T6C624 (DNA-directed RNA polymerase subunit beta n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C624_9RHOD)

HSP 1 Score: 967 bits (2501), Expect = 0.000e+0
Identity = 557/1230 (45.28%), Postives = 756/1230 (61.46%), Query Frame = 0
Query:   39 IQPSTLPGGSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQR-VSIRVHNLSIQKPRLNLDGAGK----VSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVI-ASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNF-EAGIAFLRKYIFVHLSVGCYE-PQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMR---RENERRAERKTNTSVSGEDLLSLVKESLKKAIHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSSTAVVTHGSAARREEIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKAEVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLD-----EWIGTMEQVFLRIRPSV-DNQNNSVNPIAMRGATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRFIRLTEEETETLKTVDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLG------PSR-------RKS--------EPIIECRICERDGRESIIEKIAMPYSFKYLTNELAAMNIR 1230
            +QP++LP  +EDER E L+  V  H+ESFD+A+ +GL  +  ELD V      + + K QR + + + N  I KPR+   G        S+   + P   R   ATY  +L G F   +  GD V+   ++R+  +P+MV S  C+L G S  EL + GEEEYE GG FI NG EKV+R+VVVPR NH I+  R +N  RG +FT+ +LS R +R D    T H H L +G++ VR +I + E+F+P  +LL+  LP   +DRE+++L+V     +  LC+  IA+IK+++  S+H R   +    S   +    + YLG +F+  +  D +DT  F E G   LRKYI VHLS   +   Q  S   +K DL +++I KL      +   DN D+L++Q V+ PG LYL  +KEK+E  LR +  + +   +  E RA+      +  +D +    E++   I  D V + M   ++TG L   SGL + Q  GYSV+A+RINYLRF+A FR++HRG F+A +++ SVR+LLPE+WGFICPVHTPDG PCG+LNH++S A V+    AR E I D        P PA++    + P +++P+L+DGR+LG+V    A +L+  LR  K++    +L   AEV++V         PGV++++ P RL+RPVK+L             +LG D     E IG+ EQV+LR+R +  +     V   A    THAE+   +FLS+L SL+PF +MNQ PRNM+QCQMAKQ+MGTPCH    R D K+YRL  PQ+PITR R  QD  G D  PNG NAV+AVI+YTG DMEDA+VIN++S++RGFA G +Y    ++LDE G  +  RF      + + L+     GLP VG+R+++   LY   S+  +         KY S E  TVD+V + DSD       ++ PGIR A+I+ R  R P VGDKFASR GQKGT+S+ WP EDMPFSE+GM PDILFNPNGFPSRMTIGMMVE M GK GA  G   DS+PF+FDEE   +D+F +QL  AG+ + GNETLYSGY+GEPF V +F GV+HYQRLRHMV DKFQVR+TG V+ + RQPIKGRK GGAIRFGEMERD L++HG +FLL DRL  ASD H+VRVC  CGS+L       P+R       RKS        +  I+C  C  D   + ++ + +PY FKYL+ ELAAMNIR
Sbjct:    1 MQPTSLPIQNEDERVERLRSLVRPHVESFDWAMMDGLGELPSELDDVCVAVIREHDAKGQRQLRVSLENAYISKPRIMTTGKRARDRASSSTAAMYPRHAREGRATYQAELNGVFC--FREGDTVIDRVTRRLGEVPVMVCSSFCNLHGLSPAELIDRGEEEYELGGYFICNGVEKVVRMVVVPRRNHMIALRRPSNANRGPLFTDFALSMRCVRSDQCGVTNHLHYLMNGSMTVRFSIRRQEFFLPIVLLLQALLPRSYSDREMFDLMVQARRDDAFLCDRVIAMIKDVA--SIHIRLNSSVGGNSRRNTPEQVVRYLGSTFKVAL--DPDDTMTFGEVGQLLLRKYILVHLSESSHNLQQRSSVYSAKVDLFLVMIWKLISVVRGERVPDNPDSLANQEVLLPGHLYLMYMKEKIEDCLRNIKLVYQVALKNEESRAQ--IEQQLFNKDAI----EAMLMKIKFD-VGRRMELFIATGNLQTQSGLGLLQTSGYSVVADRINYLRFMAHFRSIHRGKFFAEVKTTSVRRLLPESWGFICPVHTPDGAPCGLLNHITSLATVSQKLEARFESIADFCFARGAQPPPAMTGNAELIPAKSVPILMDGRVLGYVLSSMALKLSELLRIEKVKDG-GILPPTAEVVHVEDFPRLGIHPGVFLYSGPARLLRPVKFL------------RILGKDDGLSEEMIGSFEQVYLRLRRAEKEYPPEVVQDGAGNAPTHAELDDLNFLSILGSLTPFSDMNQSPRNMYQCQMAKQTMGTPCHNFDRRADVKIYRLLTPQIPITRNRKSQDSTGFDNFPNGTNAVVAVITYTGYDMEDAMVINRSSVDRGFADGFIYSTTDVDLDESGSSQRQRF----GSQDKRLEF----GLPKVGSRLTRNDPLY---SVVDTAKEGQPNVKKYTSSESATVDQVRVLDSDA-----PSKEPGIRRASIKLRCRRSPTVGDKFASRHGQKGTVSSLWPVEDMPFSETGMTPDILFNPNGFPSRMTIGMMVESMCGKLGAWQGKLQDSTPFRFDEEESVVDFFGQQLRDAGFNYYGNETLYSGYSGEPFHVEIFVGVIHYQRLRHMVSDKFQVRSTGPVNVVTRQPIKGRKLGGAIRFGEMERDALLSHGTAFLLYDRLFSASDAHVVRVCRVCGSILSTTAGASPNRFAGQARTRKSNFAVTQVQQTRIQCVSC--DNLLAPVDAVFLPYVFKYLSAELAAMNIR 1186          
BLAST of Ggra7311.t1 vs. uniprot
Match: A0A5J4YXV2 (DNA-directed RNA polymerase subunit beta n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXV2_PORPP)

HSP 1 Score: 900 bits (2326), Expect = 4.080e-306
Identity = 529/1249 (42.35%), Postives = 725/1249 (58.05%), Query Frame = 0
Query:   39 IQPSTLPGGSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRVSIRVHNLSIQKPRLNLDGAGKVST----RRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRE----NERRAERKTNTSVS---GEDL--LSLVKESLKKA--IHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSSTAVVTHGSAARREEIQDLFSDFNITPAPALSAAHVIP---PERTIPVLVDGRILGFVEEISAEELTLQLRYSKI------RAAVSVLSEKAEVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDN----QNNSVNPIAMRG-------ATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKG------GGRDSRFIRLTEEETETLKTVDQDGLPVVGARVSQGSALYGI--GSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGPSR------RKSEPI---------IECRICERDGRESIIEKIAMPYSFKYLTNELAAMNI 1229
            +Q STL    E  R + L+    AHL+SF+FA+  GL  + EE++ +      D + +S+  ++R+    + +PR    G G           VLP+ CR +G TY   L G F I+   G  + +  + I  +PIMV S  CHL G S +EL  LGEEEYE GG FI+NG EKV+R+++  R NH I+  RD+N+ RG  ++  S+S R  R D+ST T+H H L SG   +R+TIN+ E+ +P  +++R  LP  TTD +I  LIVG    +  L    +++I +  E  +   R     + S    +   ++YLG  FR ++       S+   G   LR+Y+ VHLS    +  ++S D +KA +L L+IR+L    + DV  D+ D+L HQ ++ PG L+L  L+++LE LL    + + R     N + A   TN++     G+D   +  +      A  +H   V K + Y ++TG L   SGLD+    G++V+AERIN+LRFI+ FRA+HRG F+      SVR+LLPEAWGF+CPVHTPDG PCG+LNHL+S+A +     A  ++I       N+     L +   +        + V+VDGR+ G+V    A+EL  +LR +K+       A +  LSE    I    G  + FQ GV+I+T P RLMRPV+WL    R           L E+IGT EQ+FLR+  +       +    + IA  G       A+H E++  + LS+LASL+PF ++NQ PRNM+QCQM+KQ+MGTPCH   +R D K+YR+  PQVP+TR   MQD  G DL PNG NAV+AVISYTGNDMEDAL+INKAS ERGF  GTVY    +NLDE        GG             E +  + +DGLP VGA V++G ALY +   + H    +  T+ T +KS E   VD+V I       N        IR  +I+ R  RRP +GDKFASR GQKGT++A WP  DMPF++SGMIPDILFNPNGFPSRMTIGMMVE M GK  + +GLF DS+PF+FD++  A  YF EQL  AG             TGEP EV++F GVVHYQRLRHMV DKFQVR++GR +PL RQPI GRK GGAIRFGEMERD L+ HG + L++DRL   SD+H V +C  C S+L  +R        ++P          + CR C +   + ++++I +PY ++YL NELAAMNI
Sbjct:   18 VQASTLDPKDEAARVKMLRSFTRAHLDSFNFAVTTGLERVCEEMESMTIEYSGDIHSESKWSAVRLEKTRLIRPRAQDSGTGGTDAATYGHSKVLPNHCRESGKTYAAQLVGTFLISNSAGASLRV-EKTIGVLPIMVSSSHCHLSGLSPRELLALGEEEYELGGYFIINGVEKVLRMLIASRKNHMIAIERDSNKKRGPQYSPYSVSMRCGRPDMSTRTIHLHYLVSGTATLRLTINRQEFLVPVVLVMRALLPDGTTDEDICRLIVGPMHGDMRLFTRVLSMIHDAQELELAGPRT----FSSERAPKRWFLAYLGLRFRQVLR-PPSFVSDETVGQLLLRRYVLVHLSTRPEDSDSQSLDSAKAQVLGLMIRRLCALVSGDVASDSSDSLMHQEILLPGHLFLMYLRDRLEVLLESWRNTLLRRASIANPKGAGLGTNSAARLQHGQDPHDVQFISSQFSAAGPVH---VGKKLEYFIATGNLESVSGLDLMDKAGFAVVAERINFLRFISHFRAVHRGNFFTKSPITSVRRLLPEAWGFVCPVHTPDGAPCGLLNHLTSSAEIAQQPCASYDDIAQSIRRTNLAHEVLLDSGAFVRCTFGSDALAVVVDGRVFGYVPRADAKELATRLRLAKVGDVSGNMARIPPLSE----IVCISGRRRLFQ-GVFIYTAPSRLMRPVEWLEHGRR-----------LTEYIGTFEQMFLRVATNDTGGGPEEQEIQSEIAKFGQSAAPERASHRELNSMNTLSILASLTPFSDLNQSPRNMYQCQMSKQTMGTPCHNFSHRADTKMYRIQTPQVPLTRNFQMQDAAGMDLFPNGTNAVVAVISYTGNDMEDALIINKASYERGFCAGTVYTTIAVNLDENAPSPSVFGGN------------EGVGAIGKDGLPEVGAIVNKGDALYSVILNARHERFGNVKTQVTVHKSSETAIVDQVRILPPKAGMNPNA--DSSIRRVSIKLRYPRRPTIGDKFASRHGQKGTVAALWPEADMPFTDSGMIPDILFNPNGFPSRMTIGMMVESMCGKTSSTYGLFQDSTPFRFDDQMAAYHYFGEQLLSAGXXXXXXXXXXXXXTGEPLEVDIFIGVVHYQRLRHMVSDKFQVRSSGRTNPLTRQPIAGRKMGGAIRFGEMERDALLGHGTAQLVQDRLHHCSDLHTVYLCNACHSVLSVARDVQAIESGNKPYGSNVLAVRQMRCRSCGQG--DVVVKRILLPYVYRYLANELAAMNI 1225          
BLAST of Ggra7311.t1 vs. uniprot
Match: M2W9X3 (DNA-directed RNA polymerase subunit beta n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W9X3_GALSU)

HSP 1 Score: 852 bits (2202), Expect = 1.110e-287
Identity = 483/1136 (42.52%), Postives = 680/1136 (59.86%), Query Frame = 0
Query:   87 FRGPSDENGKSQ----RVSIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQR-IARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYV-SRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRENERRAERKTNTSVSGEDLLSLVKESLKKAIHSDM--------------VSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSSTAVVTHGSAARREEIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKAEVIYV--PPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRP----SVDNQNNSVNPIAMRGATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQV---------------PITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRFIRLTEEETETLKTVDQDGLPVVGARVSQGSALYGIG--SIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGC 1179
            F  PS   G++      V I V N+ ++KP  +     + S    +LP  CR    +Y   L+   T+      KV     R +  IP+MVRS  CHL      ELR+LGEEE+E GG FI NG EKV+R+++V R NH ++  RD+N  RG +F++ S   R +R D ++ T H H L SGA++ R++I+K EY IP  ++ +  +P E TDR IYE+I+ G+  +  L +  IA++ +                LS Y  +  + ++YLGR+FR  +   D+  ++ + G  FL+ ++ +HLS   Y   +     +K ++L L+IRKL   A   +  D+ D+L+HQ V+ PG LY+  LKEK+E  L  + S++                       L   ++KKAIH +               + K M + ++TG L   +GLD+ Q  GYSV+AERI+Y R+I+ FR +HRG F++ +++ SVRKLLPEAWGF+CPVHTPDG PCG+LNHL+   +V+       E +     +  +T +   S+  + P     PV++DG+ILG++       ++ Q+R  K+   +++L + AE++ V     + + F PG++I T P RL+RPV  L   + K            E+IG +EQ FLRI      S+D +N   +      ATH E+   SFLS++ASL+PF +MNQ PRNM+QCQM+KQS+GTP H    R D+K+YRL  PQV               PI R    QD    D  PNG NAV+AV+SYTG DMEDA+VINKASL+RG AHGT+Y    I+LD+  G + S++I    +     +T+ +DGLP VG RV +G  LY I   +++   + ++ K   +K  +   VD+V +        T  A   GIR A+I+ R  R P +GDKFASR GQKG +SA WP EDMPF+E+G++PDI+FNPNGFPSRMTIGMM+E + GKAGALHG+F DS+PF+FDE++ A+DYF EQL KAG+   GNE +YSGYTGEPF+V++F GV+HYQRLRHMV DKFQVR+TG ++PL RQP+KGRK GGAIRFGEMERD L+AHGA++LL DRL + SD+H V  C  C
Sbjct:  115 FHTPSSLMGQTPASKLHVEIDVANIEVRKP--SQYPKARRSVHDKLLPRHCRENQTSYKAPLF--LTLRCKIDGKVCHQLVRLVGEIPVMVRSAVCHLSKMDSGELRKLGEEEFETGGYFICNGVEKVLRMIIVSRRNHIMAIKRDSNSNRGPLFSSFSCYIRCVRPDQTSKTFHLHYLTSGAIQARISISKQEYMIPVLLIFKALIP-EITDRTIYEVIMQGNENDIYLRDRVIAMLMD---------------GLSKYEGTAGSELAYLGRTFRIALSIFDDQVTDEQVGRQFLKHFVLIHLSGDKYTDDDNV---AKLEMLALMIRKLIAVARGSICPDSPDSLAHQEVLLPGHLYMMYLKEKIEDYLLGIRSVI-----------------------LKDFNMKKAIHLEEGPYFATCLQRCPIDIGKRMEHFIATGQLQTRTGLDLMQTAGYSVVAERISYYRYISHFRCVHRGQFFSELKTTSVRKLLPEAWGFLCPVHTPDGAPCGLLNHLAHPVIVSQSEEMATEPLLSWLVEHGMTLSNKYSSLEM-PNAWEYPVVLDGKILGYLSVDIMMNISQQMRILKVNNEMNILPKTAEIVTVVRQTWNDRNF-PGLFIFTGPARLLRPVWLLLSKSPKQ-----------EYIGPLEQAFLRIANPKVVSLDWKNMKKDESVFVPATHEEIDCLSFLSLVASLTPFSDMNQSPRNMYQCQMSKQSLGTPYHLFERRSDSKMYRLVTPQVSFSFHVWTSFDIFQIPIVRNFPTQDSFEMDHFPNGFNAVVAVLSYTGYDMEDAMVINKASLDRGLAHGTMYSTQLIDLDQMRGTK-SKYIGGGSQH----ETIGEDGLPEVGVRVFKGDPLYCIADETVYSLASGTSEKVYFHKQADPAIVDQVRLIPV-----TSRASAEGIRRASIKLRYPRIPVIGDKFASRHGQKGVLSALWPSEDMPFTENGIVPDIIFNPNGFPSRMTIGMMMESICGKAGALHGMFQDSTPFRFDEDNTAVDYFGEQLRKAGFNFYGNEVMYSGYTGEPFQVDIFIGVIHYQRLRHMVSDKFQVRSTGPINPLTRQPVKGRKVGGAIRFGEMERDALLAHGAAYLLHDRLQLCSDLHTVYACEVC 1181          
BLAST of Ggra7311.t1 vs. uniprot
Match: A0A6G0W8Q0 (DNA-directed RNA polymerase subunit beta n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W8Q0_9STRA)

HSP 1 Score: 830 bits (2144), Expect = 9.990e-280
Identity = 497/1231 (40.37%), Postives = 689/1231 (55.97%), Query Frame = 0
Query:   41 PSTLPGGSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRVSIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASI-MRRENERRAERKTNTSVSGEDLLSLVKESLKKAIHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSS-----TAVVTHGSAARREEIQ--DLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKA-----EVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMR-GATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRF---IRLTEEETETLKT-VDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGP-----------------SRRKSEPIIECRICERDGRESIIEKIAMPYSFKYLTNELAAMNIRTVFALK 1236
            PS++      + +E L+R VA H+ SFDF I+EGL L    + P+       + G S +++I + +  I  P  +          R +LPSECR+ G +Y   L      ++  G       + +  IPIMVRS  CHL   S  EL +  EE  E GG FI NG E+ +RL+ +PR +H ++  R A   RG +++++ ++ R +RRD S  TL  H L  G   VR+ + K E+ +PAG+LL+   P   TDREIY+ +V GDV NT L      I++E    SV+              SR+ A++YLG+  R ++ Y   D +N E G  FL  Y+FVH+      P+ E     K +L+ L++RKL   A  D++ DN D+L +  ++ PG +YL LLKE+L+  L   ASI M+ E       K+  +V     +  V E  +   H+      + Y L+TG L  SSGLD+ Q+ GY+++AE++NY R+ + FR++HRG F+  M++ +VRKLLP++WGF+CPVHTPDG PCG+LNHL+      T+       A  EE++     ++  + PA   S    + P   +PV+++G++LG        EL   LRY+K     S+  E+      EV  + P     F PG+Y+     R  RPV       ++NTD         E+IG MEQVF+ I          V P  +R   TH E+  T+ LS++ASL+PF E NQ PRNM+QCQMAKQ+MGTP H+I  R D K+YR+  PQ PI +   +++    D +P G NAV+AVISYTG DMEDA+++NK+S ERGF H +VY   ++++  K       +   ++    + E     +D+DG P VG  V  G  +    + H    S    + K+K  E   +D++ +  ++    TK         A+I+ R  R P +GDKF+SR GQKG +S  WP  DMPFSESGM PDI+ NP+ FPSRMTIGM+VE M+ KAGAL G + D++PFQF EEHRAID F + L KAGY + G+E LYSG TG     +++ GVV+YQRLRHMV DK QVR TG  + L RQP+KGRKK G IRFGEMERD L+AHG SFLL DRL   SD HI  VCT CGSLL                   +  K      C  C R G     E +AMPY F+YL NELAAMNI+   ALK
Sbjct:   20 PSSVAASCPSKTNEKLQRLVAPHVASFDFMIKEGLDLAVASIAPMTI-----DVGHSSKMNIWIESAQIGYPTSDATNG----QARLLLPSECRQRGISYTAPLIVTLARSFVGGSTTEHIQRTVGHIPIMVRSQRCHLANMSPPELVKAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFTKRGDLYSDIGVTMRCVRRDQSAVTLTMHYLHDGNATVRLGVRKQEFMVPAGLLLKALYP--LTDREIYDRVVRGDVDNTYLAARMELILRESKRFSVY--------------SRDEALAYLGKHLRLVLPYLSSDMTNVEVGNRFLDDYVFVHI------PKGEKGRAQKVELVCLMLRKLYAFAKGDIREDNPDSLMNHELLLPGHVYLMLLKERLQDSL---ASIKMQIETA-----KSKPAVVDASYVKKVWERTQNVGHA------LTYFLNTGNLRTSSGLDLMQIAGYTIVAEKLNYYRYFSHFRSVHRGQFFTTMKTTAVRKLLPDSWGFMCPVHTPDGSPCGLLNHLAVECQLVTSPPYSPDTALDEELKLARFLANLGMIPATGYSDGSFVAPHHYLPVMLNGKLLGAAAPTVCLELESALRYTKASPEASLRRERGVVATLEVCLIMPVVGGPF-PGLYLSADAARFTRPV------LQRNTD-------WIEYIGPMEQVFMNI---------GVLPADIRPSTTHMEIKATNMLSLVASLTPFSEHNQSPRNMYQCQMAKQTMGTPAHSIPFRADNKMYRIQTPQAPIVQNERLRE-YNLDEYPLGTNAVVAVISYTGFDMEDAMILNKSSYERGFGHASVYKQIQVDIAPKENSTTKSYFGNVKPGSNDDEVFSAKLDRDGFPYVGQHVEYGDPI----ACHIDQTSGKETFVKHKETEPAVIDQINLVGNNPSMCTK---------ASIKLRFVRNPIIGDKFSSRHGQKGVLSILWPQADMPFSESGMSPDIIINPHAFPSRMTIGMLVESMAAKAGALRGKYMDATPFQFSEEHRAIDVFGKYLKKAGYNYMGSEPLYSGLTGTVMHADIYMGVVYYQRLRHMVSDKSQVRATGPTNSLTRQPVKGRKKRGGIRFGEMERDALLAHGTSFLLHDRLMNCSDKHIATVCTKCGSLLSTWTQRASVSDAGQSDLAIALHKDRKQWMCATC-RTGEAC--EAVAMPYVFRYLANELAAMNIKMTLALK 1165          
BLAST of Ggra7311.t1 vs. uniprot
Match: L8GRD1 (DNA-directed RNA polymerase subunit beta n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRD1_ACACA)

HSP 1 Score: 824 bits (2129), Expect = 7.300e-278
Identity = 491/1209 (40.61%), Postives = 716/1209 (59.22%), Query Frame = 0
Query:   47 GSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFR----GPSDENGKSQRVSIRVHNLSIQKP-RLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRENERRAERKTNTSVSGEDLLSLVKESLKKAIHSDM-VSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSSTA-VVTHGSAARREEIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKAEVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMRGATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDS-RFIR--LTEEETETL--------------KTVDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGPSRRKSEPIIECRICE-RDGRESIIEKIAMPYSFKYLTNELAAMNIR 1230
            G  ++ +  ++      +ESF+FA+++GL L  ++L    F+    GP+        V +   +  I KP R NLD          + P+ECR  G TY G      TI Y  G+KV    + + +IP+MV+S  CHL G S  EL +  EE  E GG FI+NG EK+IRL+ +P+ N   S A     G+G  +T   +  RS+R+D S   +  H L +G+  +R+++ K EYFIP  ++L+  +   TTDREIY  +V GDV+NT L +    I++E                     ++   ++YLG SFR  +   +  T + E G   L +YIFVHL+     PQ    ++ K DLL  +IRKL   A+ ++  DN D+  +  ++ PG +YL  LKEK++  L  V  I+   N+  A       ++ E   S  +  L+KA+  +  + K + Y L+TG L+ S+G+ + Q+ GY V+AE++N+LR+ + FR +HRG F+A M++ +VRKL+PE+WGF CPVHTPDG PCG++NHL++   ++TH +  RR  +  L     ++PA   S + + P ++ + V +DG ++GF+   +A +L  +LRY K++    +     E+  VP G  K + PG+Y+ T P R+MRPVK+LA              G  E+IG+ EQV++ I  +V +++     I     TH E+ P + LSV+A L+PF +MNQ PRNM+QCQMAKQS+ TPCH+  +R D K+YR+  PQ P++RT  + D    D +P G NA++AV+SYTG DMEDA++INKA+ +RGF H +VY N  ++   K    D+ ++I   L E++ +                + +++DGLP  G R+  GS  Y   ++ G T   +    +YKS EE  VDEV +  +    ++KG     I+  +I+ R +R P +GDKFASR GQKG MS  WP E+MPFSESGM PD++ NP+ FPSRMTI M++E M+ K+GALHG+F D++PF+FDE+H A+DYF +QL  AGY + GNE +YSG  G     +++ GVV+YQRLRHMV DK+QVR+TG VH L +QPIKGR+KGG IRFGEMERD L+AHG SFLL+DRL   SD      C GCGS++ P   K   ++ C  CE +DG    +  I +PY F+YL NELAAMNIR
Sbjct:   22 GVREKLNPKMQDMTRPQIESFNFAMQDGLQLAVQDLLKEEFQVAKGGPA--------VKLWYEDFQIAKPSRDNLD--------EKLYPNECREGGFTYNGLCVA--TIGYKVGEKVGRLQRTMGKIPLMVKSNKCHLDGMSPAELVKAREEGTELGGYFIINGLEKLIRLICMPKRNFRPSWA-----GKGNYYTQHGVQIRSVRKDQSNQNMTLHYLSNGSCSLRISVFKQEYFIPGILILKALI--STTDREIYNSLVRGDVENTFLTDRVEVILREAKS-------------YENMETKEQCLAYLGSSFRIALRVPERMT-DIEVGQFLLDRYIFVHLN-----PQK---NKQKFDLLAFMIRKLYSLASGEIGPDNADSPMNFELLLPGHVYLMFLKEKMQEWLVGVKLIL---NKLHAMPSAKAGLTWE---SDPEGYLRKAMEKNFDLGKKVDYFLATGNLISSTGMGLMQLNGYVVVAEKLNWLRYFSHFRCVHRGAFFATMKTTAVRKLMPESWGFFCPVHTPDGAPCGLINHLTAVCRLITHQADTRR--MASLLVSLGVSPA---SQSILFPSDQYLDVFLDGELMGFIPHAAAPQLVEKLRYLKVKKLEDI-PWTLELGLVPAGVSKQY-PGLYMWTTPSRMMRPVKYLAT-------------GDIEYIGSFEQVYMNI--AVLDEDRKDKDIF----THQEIRPMNMLSVVAGLTPFCDMNQSPRNMYQCQMAKQSIATPCHSFQHRTDNKIYRIQNPQAPVSRTN-VYDEYELDDYPIGANAIVAVLSYTGYDMEDAMIINKAAYQRGFGHASVYKNELVDFARKEKKGDAPKYIANPLVEDKDQQAMDEDGMQPAKKRFCEELEEDGLPAPGTRLEAGSPFYV--TVDGGTGKPHLH--RYKSKEEAVVDEVRVVGT----SSKGL----IQRVSIKLRLNRNPVIGDKFASRHGQKGVMSQLWPQENMPFSESGMSPDVIINPHAFPSRMTIAMLIESMASKSGALHGMFQDATPFRFDEKHTAVDYFGQQLLAAGYNYYGNEPMYSGILGCELRADIYLGVVYYQRLRHMVKDKYQVRSTGPVHQLTQQPIKGRQKGGGIRFGEMERDCLLAHGTSFLLQDRLFKCSDYSRSWACKGCGSIISPVNTKDRKVM-CTFCESKDG----VTAITIPYVFRYLVNELAAMNIR 1133          
BLAST of Ggra7311.t1 vs. uniprot
Match: A0A024U2C2 (DNA-directed RNA polymerase subunit beta n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024U2C2_9STRA)

HSP 1 Score: 822 bits (2122), Expect = 1.900e-276
Identity = 490/1227 (39.93%), Postives = 688/1227 (56.07%), Query Frame = 0
Query:   41 PSTLPGGSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRVSIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRENERRAERKTNTSVSGEDLLSLVKESLKKAIHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLS-STAVVTH-----GSAARRE-EIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKA-----EVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMRGAT-HAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRFIRLTEEETETL--KTVDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGP---------------SRRKSEPIIECRICER-DGRESIIEKIAMPYSFKYLTNELAAMNIRTVFALK 1236
            P++ P     + +  L++ VA H++SF+F + EGL      + P+       + G S +++I + ++ I  P  +    G   T   +LP+ECR+ G +Y   L      ++  G       + +  IPIMVRS  CHL   S  EL +  EE  E GG FI NG E+ +RL+ +PR +H ++  R A   RG +++ L ++ R +RRD S  TL  H L  G   VR+ + K E+ +PAG+LL+   P   TDREIY+ +V GDV NT L      I++E    +V+              SR+ A++YLG+ FR ++ Y   D +N + G  FL +Y+FVH+       Q E     K +LL L++RKL   A  DV+ DN D+L +  ++ PG LYL +LKE+L+ +L   ASI  +        KT  +V     L  V E  +   H+      + Y L+TG L  +SGLD+ Q+ GY+V+AE++NY R+ + FR++HRG F+  M++ +VRKLLP++WGF+CPVHTPDG PCG+LNHL+    +VTH      + A  E ++    ++  + P+   S    + P   +PVL++G+++G        EL   LR++K      +  E+      EV  + P     F PG+Y+     R  RPV+ L  S               E IG MEQVF+ I          V P  +R +T H E+ PT+ LS++ASL+PF E NQ PRNM+QCQMAKQ+MGTP H+I  R D K+YR+  PQ PI     +Q+    D +P G NAV+AVISYTG DMEDA+++NK+S ERGF H +VY   ++++          +    +    TL    +D DG P VG  V  G  +    + H +  +    + K+K  E   +D++     ++  N  GA      +A+I+ R  R P +GDKF+SR GQKG +S  WP  DMPF+ESGM PDI+ NP+ FPSRMTIGM+VE M+ KAGAL G + D++PFQF+E+HRAID F + L KAGY + G+E LYSG TG     +++ GVV+YQRLRHMV DK QVR TG ++ L RQP+KGRKK G IRFGEMERD L+AHG +FLL DRL   SD HI  VCT CGSLL                 +  K      C  C   DG     E +AMPY F+YL NELAAMNI+   ALK
Sbjct:   21 PTSAPASCPPKTNAKLQKLVAPHVDSFNFMLSEGLDHAVASILPLTI-----DVGHSNKMTIWIDSVQIGYPTSDATHGGHAKT---LLPTECRQRGISYTAPLIVTLARSFVGGSTTEHLQRTVGHIPIMVRSQRCHLANLSPAELVQAHEEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFSKRGDLYSELGVTMRCVRRDQSAVTLTLHYLLDGNAMVRLGVRKQEFMVPAGLLLKAMYP--LTDREIYDRVVRGDVDNTYLAARMELILRESKRFAVY--------------SRDEALAYLGKHFRHVLPYLSADMTNVQVGNRFLDEYVFVHIQ------QGEKGRAQKVELLCLMLRKLYAFAKGDVREDNPDSLMNHELLLPGHLYLMILKERLQDML---ASIQGQIEGA----KTKPAVLDATYLKKVWERTQNIGHA------LTYFLNTGNLRTTSGLDLMQLAGYTVVAEKLNYYRYFSHFRSVHRGQFFTTMKTTTVRKLLPDSWGFMCPVHTPDGSPCGLLNHLAVECELVTHPPYTPDTVAEEELKLARFLANLGMIPSTGFSDGSFVAPHHYLPVLLNGKLVGAAAPTVCVELEAALRFTKATPEAHLRKERGVVPTLEVCLILPVVGGPF-PGLYLSADAARFTRPVQQLHTS-------------WTEHIGPMEQVFMNI---------GVLPADIRDSTTHMEIKPTNMLSLVASLTPFSEHNQSPRNMYQCQMAKQTMGTPAHSIPYRTDNKMYRIQTPQAPIVHNERLQE-FQLDEYPLGTNAVVAVISYTGFDMEDAMILNKSSYERGFGHASVYKQIQVDIAPNEKTTTKSYFGNVQPHGATLFSSKLDADGFPHVGQHVEYGDPI----ACHINETTGKASFVKHKETEPAVIDQI-----NLLGNGAGAIAT---KASIKLRFVRNPIIGDKFSSRHGQKGVLSILWPQADMPFAESGMSPDIIINPHAFPSRMTIGMLVESMAAKAGALRGEYMDATPFQFNEQHRAIDQFGKYLKKAGYNYMGSEPLYSGLTGTVMHADIYMGVVYYQRLRHMVSDKSQVRATGPMNSLTRQPLKGRKKKGGIRFGEMERDSLLAHGCAFLLHDRLMNCSDKHIATVCTKCGSLLSTWTQRASVTDAGQSDLTLHKERQHWMCATCRTGDG----CEPVAMPYVFRYLANELAAMNIKMTLALK 1164          
BLAST of Ggra7311.t1 vs. uniprot
Match: A0A067CVJ7 (DNA-directed RNA polymerase subunit beta n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CVJ7_SAPPC)

HSP 1 Score: 819 bits (2116), Expect = 1.700e-275
Identity = 482/1228 (39.25%), Postives = 699/1228 (56.92%), Query Frame = 0
Query:   41 PSTLPGGSEDERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRVSIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRENERR-AERKTNTSVSGEDLLSLVKESLKKAIHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLS-------STAVVTHGSAARREEIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKA-----EVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMRGATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRF---IRLTEEETETLKT-VDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGPSRRKS----------EPIIECR---ICERDGRESIIEKIAMPYSFKYLTNELAAMNIRTVFALKEV 1238
            PS+ PG      +  L + V  H+ SFD+ +EEGL L  + + P+     S + G S +++I + +  I  P  +       +  + +LPSECR+ G +Y   L      ++G G  +    + + +IPIMVRS  CHL G S  EL +  EE  E GG FI NG E+ +RL+ +PR +  ++  R A   RG ++++  +  R +RRD S  T+  H L  G   +R  I K E+ +P G+LL+       TDRE+Y+ +V GD +NT L      I++E    SV+              SR+ A++YLG+ FR+++ + D+D SN + G  F+  Y+FVH+      P+ E     K +LL L+IRKL   A  D++ DN D++ +  ++ PG LYL +LKEKL+ +L      MR + ER+ A+ K   SV     L+ +K++ ++  +   +   M Y L+TG L  SSGLD+ Q+ GY+++AE++NY R+ + FR++HRG F+  M++ +VRKLLP++WGF+CPVHTPDG PCG+LNHL+       S            +++    +D  + PA   S      P   +P+ ++G++LG         +   LRY+K     SV  E+      EV  + P     F PG+Y+     R  RPVK L      +TD       L E+IG MEQVF+ I    D+   S         TH E+ PT+ LS++ASL+PF E NQ PRNM+QCQMAKQ+MGTP H+I +R D K+YR+  PQ PI     +++    D +P G NAV+AVISYTG DMEDA+++NK++ ERGF H +VY   ++++          +   ++      E + T +D+DG P +G ++  G  +    + H ++ +    + K+K  E   +D++     ++  NT         +A+I+ R  R P +GDKF+SR GQKG MS  WP  DMPFSESGM PD++ NP+ FPSRMTIGM+VE M+ KAGAL G + D++PFQF+E++RAID F   L +AGY + G+E LYSG TG     +++ GVV+YQRLRHMV DK QVR TG ++ L RQP+KGRKK G IRFGEMERD L+AHG +FLL+DRL   SD HI  VCT CGSLL    +++          E  +  R   +C         E +AMPY F+YL NELAAMNI+    LK V
Sbjct:   19 PSSAPGSCPQRTNPKLLKLVEPHVASFDYMLEEGLDLAVQSIAPL-----SMDVGNSNKMTIWIESAQIGFPTTDASN----NHAKAMLPSECRQRGISYTAPLVVTLGRSFG-GSAIEHLQRTVGQIPIMVRSKRCHLAGLSPPELVQKREEANEMGGYFICNGNERCVRLLQMPRRHQLMAVTRGAFAKRGDLYSDKGVFMRCVRRDQSAVTMTLHYLLDGNATLRFGIQKKEFMVPVGLLLKALYT--LTDREVYDRVVRGDTENTYLSARMELILRESKRFSVY--------------SRDEALAYLGKHFRSVVPFLDKDMSNVDVGNRFVDDYVFVHI------PKGEKGRAQKVELLCLMIRKLYAFAKGDIREDNPDSVMNHELLLPGHLYLMILKEKLQEML----VSMRLQIERQVADTKNKVSVMD---LAYLKKTWERTAN---IGNAMTYFLNTGNLRTSSGLDLMQLAGYTIVAEKLNYYRYFSHFRSVHRGQFFTTMKTTTVRKLLPDSWGFMCPVHTPDGSPCGLLNHLAVECQLVTSPPFTADTVLGEEQKLARFLADLGMVPATGYSDGACFMPHTYLPITLNGKVLGGAPAEVCTIIEQALRYTKAVKDKSVRVERGVDKTLEVCLILPVVGGPF-PGLYLSCDAARFTRPVKQL------HTD-------LVEYIGPMEQVFMNIAVLKDDIRAST--------THMELKPTNMLSLVASLTPFSEHNQSPRNMYQCQMAKQTMGTPAHSIVHRTDNKMYRIQSPQAPIVHNERLREYQ-LDEYPLGTNAVVAVISYTGFDMEDAMILNKSAYERGFGHASVYKQIKVDISPNENSTTKSYFGNVKPGSANGEVISTALDRDGFPHIGQKIQYGEPI----ACHINSTTGKESFVKHKESEPAIIDQI-----NLLGNT--GNNADFTKASIKLRFVRNPIIGDKFSSRHGQKGVMSILWPQADMPFSESGMSPDVIINPHAFPSRMTIGMLVESMAAKAGALRGQYMDATPFQFNEQNRAIDTFGVYLKEAGYNYMGSEPLYSGLTGTVMHADIYMGVVYYQRLRHMVSDKSQVRATGPLNSLTRQPVKGRKKHGGIRFGEMERDSLLAHGCAFLLQDRLMNCSDKHIATVCTKCGSLLSTLNQRAAASTAGASDIEVALGARKLWMCSTCSTGEGCEAVAMPYVFRYLANELAAMNIKMTMTLKGV 1170          
BLAST of Ggra7311.t1 vs. uniprot
Match: W4FT36 (DNA-directed RNA polymerase subunit beta n=9 Tax=Aphanomyces TaxID=100860 RepID=W4FT36_9STRA)

HSP 1 Score: 817 bits (2111), Expect = 9.530e-275
Identity = 485/1215 (39.92%), Postives = 692/1215 (56.95%), Query Frame = 0
Query:   56 LKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRVSIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTITYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGSFIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDLSTFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYELIVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISYLGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSKADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGLLRRVASIMRRENERRAERKTNTSVSGEDLLSLVKESLKKAIHSDMVSKHMLYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAAMRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLS------STAVVTHGSAARRE-EIQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTLQLRYSKIRAAVSVLSEKA-----EVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKWLAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMRGAT-HAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWNRMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDMEDALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRFIRLTEEETE--TLKT--VDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDEVIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMSASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLFNDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFTGVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDGLIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGP---------SRRKSEPIIE-------CRICER-DGRESIIEKIAMPYSFKYLTNELAAMNIRTVFALK 1236
            L++ VA H++SF+F + EGL      + P+       + G   ++++ + ++ I  P  +  G       + +LP+ECR+ G +Y   L      ++  G       + +  IPIMVRS  CHL   S  EL +  EE  E GG FI NG E+ +RL+ +PR +H ++  R A   RG +++ L ++ R +RRD S  TL  H L  G   +R+ + K E+ +PAG+LL+   P   TDREIY+ +V GDV NT L      I++E    SV+              SR+ A++YLG+ FR ++ Y   D +N + G  FL +Y+FVH+  G      E     K +LL L++RKL   A  D++ DN D+L +  ++ PG LYL +LKE+L+ +L   ASI  +    +A+     +V     L  V +  +   H+      + Y L+TG L  SSGLD+ Q+ GY+V+AE++NY R+ + FR++HRG F+  M++ +VRKLLP++WGF+CPVHTPDG PCG+LNHL+      ++   T  +AA  E ++    ++  + P+   S    + P   +PVL++G+++G        EL   LR++K      +  E+      EV  + P     F PG+++     R  RPVK      ++NT          E IG MEQVF+ I          V P  +R +T H E+ PT+ LS++ASL+PF E NQ PRNM+QCQMAKQ+MGTP H+I  R D K+YR+  PQ PI     +Q+    D +P G NAV+AVISYTG DMEDA+++NK+S ERGF H +VY   ++++  K       +    + + +  TL T  +D DG P VG  V  G  +    + H +  +    + K+K  E   +D++ +  +    NT  A      +A+I+ R  R P +GDKF+SR GQKG +S  WP  DMPF+ESGM PDI+ NP+ FPSRMTIGM+VE M+ KAGAL G + D++PFQFDEEHRAID F + L KAGY + G+E LYSG TG     +++ GVV+YQRLRHMV DK QVR TG ++ L RQP+KGRKK G IRFGEMERD L+AHG +FLL DRL   SD HI  VCT CGSLL           + +  + I+        C  C   DG E++    AMPY F+YL NELAAMNI+   +LK
Sbjct:   35 LQKLVAPHVDSFNFMLSEGLDYAVASILPLTI-----DVGHGNKMTVWIDSVQIGYPTSDATGGHS----KTLLPAECRQRGISYTAPLIVTLARSFVGGSTTEHLQRTVGHIPIMVRSQRCHLANLSPPELVKAREEANEMGGYFICNGNERCVRLLQMPRRHHIMAVRRGAFSKRGDLYSELGVTMRCVRRDQSAVTLTLHYLLDGNATIRLGVRKQEFMVPAGLLLKALYP--LTDREIYDRVVRGDVDNTYLAARMELILRESKRFSVY--------------SRDEALAYLGKHFRHVLPYLSTDMTNIQVGNRFLDEYVFVHIQPG------EKGRAQKVELLCLMLRKLYAFAKGDIREDNPDSLMNHELLLPGHLYLMILKERLQDML---ASIQGQIEGAKAK----PAVVDATYLKKVWDRTQNIGHA------LTYFLNTGNLRTSSGLDLMQLAGYTVVAEKLNYYRYFSHFRSVHRGQFFTTMKTTTVRKLLPDSWGFMCPVHTPDGSPCGLLNHLAVECQLVTSPPYTPETAADEELKLARFLANLGMIPSTGFSDGSFVAPHHYLPVLLNGKLVGAAAAAVCVELEAALRFTKATPESHLRKERGVVPTLEVCLILPVVGGPF-PGLFLSADAARFTRPVK------QRNTS-------WIEHIGPMEQVFMNI---------GVLPADIRDSTTHMEIKPTNMLSLVASLTPFSEHNQSPRNMYQCQMAKQTMGTPAHSIPYRTDNKMYRIQTPQAPIVHNERLQE-FQLDEYPLGTNAVVAVISYTGFDMEDAMILNKSSYERGFGHASVYKQIQVDIAPKENSTTKSYFGNVQPDGDGTTLFTPKLDADGFPHVGQHVEYGDPI----ACHINETTGKETFLKHKETEPAVIDQINLLGNGTGVNTAQAT-----KASIKLRFVRNPIIGDKFSSRHGQKGVLSILWPQADMPFAESGMSPDIIINPHAFPSRMTIGMLVESMAAKAGALRGEYMDATPFQFDEEHRAIDQFGKYLKKAGYNYMGSEPLYSGLTGTVMHADIYMGVVYYQRLRHMVSDKSQVRATGPMNSLTRQPLKGRKKKGGIRFGEMERDSLLAHGCAFLLHDRLMNCSDKHIATVCTKCGSLLSTWTARASVSEAGQSDQSILSKERQQWMCATCRTGDGCEAV----AMPYVFRYLANELAAMNIKMTLSLK 1168          
The following BLAST results are available for this feature:
BLAST of Ggra7311.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1420.000e+078.77DNA-directed RNA polymerase subunit beta n=1 Tax=G... [more]
R7Q7W50.000e+063.78DNA-directed RNA polymerase subunit beta n=1 Tax=C... [more]
A0A6T6C6240.000e+045.28DNA-directed RNA polymerase subunit beta n=2 Tax=C... [more]
A0A5J4YXV24.080e-30642.35DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
M2W9X31.110e-28742.52DNA-directed RNA polymerase subunit beta n=2 Tax=G... [more]
A0A6G0W8Q09.990e-28040.37DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
L8GRD17.300e-27840.61DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A024U2C21.900e-27639.93DNA-directed RNA polymerase subunit beta n=2 Tax=A... [more]
A0A067CVJ71.700e-27539.25DNA-directed RNA polymerase subunit beta n=4 Tax=S... [more]
W4FT369.530e-27539.92DNA-directed RNA polymerase subunit beta n=9 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007644RNA polymerase, beta subunit, protrusionPFAMPF04563RNA_pol_Rpb2_1coord: 60..467
e-value: 6.1E-29
score: 101.0
IPR007645RNA polymerase Rpb2, domain 3PFAMPF04565RNA_pol_Rpb2_3coord: 526..589
e-value: 1.8E-24
score: 85.7
NoneNo IPR availableGENE3D3.90.1100.10coord: 421..618
e-value: 7.9E-31
score: 109.3
NoneNo IPR availableGENE3D3.90.1100.10coord: 55..221
e-value: 7.8E-15
score: 56.8
NoneNo IPR availableGENE3D3.90.1800.10RNA polymerase alpha subunit dimerisation domaincoord: 1124..1237
e-value: 3.9E-37
score: 128.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..38
NoneNo IPR availablePANTHERPTHR20856:SF5DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2coord: 52..1233
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 55..1236
IPR037034RNA polymerase Rpb2, domain 2 superfamilyGENE3D3.90.1110.10RNA polymerase Rpb2, domain 2coord: 222..420
e-value: 1.1E-39
score: 138.2
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 765..1137
e-value: 6.3E-107
score: 358.0
IPR014724RNA polymerase Rpb2, OB-foldGENE3D2.40.50.150coord: 796..982
e-value: 1.2E-128
score: 431.3
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 766..1122
e-value: 1.2E-128
score: 431.3
IPR009674DNA-directed RNA polymerase I subunit RPA2, domain 4PFAMPF06883RNA_pol_Rpa2_4coord: 637..696
e-value: 3.2E-8
score: 33.3
IPR007641RNA polymerase Rpb2, domain 7PFAMPF04560RNA_pol_Rpb2_7coord: 1139..1232
e-value: 1.1E-20
score: 73.8
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 52..1233
IPR015712DNA-directed RNA polymerase, subunit 2CDDcd00653RNA_pol_B_RPB2coord: 59..1230
e-value: 0.0
score: 783.68
IPR007121RNA polymerase, beta subunit, conserved sitePROSITEPS01166RNA_POL_BETAcoord: 986..998

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:709975..713694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7311.t1Ggra7311.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 709975..713694 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7311.t1 ID=Ggra7311.t1|Name=Ggra7311.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1240bp
MTKEDPMKNAEKDPTSAKISKEPVLRPPPKPKFPPRNDIQPSTLPGGSED
ERHEFLKRCVAAHLESFDFAIEEGLHLITEELDPVVFRGPSDENGKSQRV
SIRVHNLSIQKPRLNLDGAGKVSTRRNVLPSECRRTGATYLGDLYGHFTI
TYGNGDKVVIASQRIARIPIMVRSVACHLRGKSRKELRELGEEEYEAGGS
FIVNGAEKVIRLVVVPRSNHPISAARDANEGRGAMFTNLSLSFRSMRRDL
STFTLHAHLLRSGAVRVRVTINKNEYFIPAGVLLRVFLPSETTDREIYEL
IVGGDVKNTALCNSAIAIIKELSERSVHFRRKDAEPWLSPYVSRNAAISY
LGRSFRAIIGYDDEDTSNFEAGIAFLRKYIFVHLSVGCYEPQNESFDRSK
ADLLVLLIRKLTGTATRDVQVDNQDALSHQSVMTPGQLYLGLLKEKLEGL
LRRVASIMRRENERRAERKTNTSVSGEDLLSLVKESLKKAIHSDMVSKHM
LYLLSTGTLLQSSGLDMPQVLGYSVIAERINYLRFIAQFRALHRGTFYAA
MRSVSVRKLLPEAWGFICPVHTPDGDPCGILNHLSSTAVVTHGSAARREE
IQDLFSDFNITPAPALSAAHVIPPERTIPVLVDGRILGFVEEISAEELTL
QLRYSKIRAAVSVLSEKAEVIYVPPGDVKTFQPGVYIHTCPGRLMRPVKW
LAKSARKNTDVQDNVLGLDEWIGTMEQVFLRIRPSVDNQNNSVNPIAMRG
ATHAEVSPTSFLSVLASLSPFPEMNQGPRNMFQCQMAKQSMGTPCHAIWN
RMDAKVYRLTYPQVPITRTRCMQDPMGADLHPNGINAVIAVISYTGNDME
DALVINKASLERGFAHGTVYVNNRINLDEKGGGRDSRFIRLTEEETETLK
TVDQDGLPVVGARVSQGSALYGIGSIHGSTNSSNTKWTKYKSVEEGTVDE
VIIYDSDMYRNTKGARGPGIREANIRTRTSRRPCVGDKFASRAGQKGTMS
ASWPCEDMPFSESGMIPDILFNPNGFPSRMTIGMMVEVMSGKAGALHGLF
NDSSPFQFDEEHRAIDYFAEQLAKAGYEHAGNETLYSGYTGEPFEVNVFT
GVVHYQRLRHMVLDKFQVRTTGRVHPLFRQPIKGRKKGGAIRFGEMERDG
LIAHGASFLLRDRLAMASDMHIVRVCTGCGSLLGPSRRKSEPIIECRICE
RDGRESIIEKIAMPYSFKYLTNELAAMNIRTVFALKEVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007644RNA_pol_bsu_protrusion
IPR007645RNA_pol_Rpb2_3
IPR037034RNA_pol_Rpb2_2_sf
IPR007120DNA-dir_RNAP_su2_dom
IPR014724RNA_pol_RPB2_OB-fold
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR009674Rpa2_dom_4
IPR007641RNA_pol_Rpb2_7
IPR015712DNA-dir_RNA_pol_su2
IPR007121RNA_pol_bsu_CS