Ggra7305.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7305.t1
Unique Name	Ggra7305.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	614

Homology

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BLAST of Ggra7305.t1 vs. uniprot
Match: A0A2V3IXK9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXK9_9FLOR)

HSP 1 Score: 788 bits (2035), Expect = 6.610e-282
Identity = 387/546 (70.88%), Postives = 445/546 (81.50%), Query Frame = 0

Query:   74 MRSFCNALLGAGVVLVTDNRTEPAHVSAWFGTDTVIVVPSRHGLPKGEVALLLRAHPKLAKNGGKMLRPHN------PSPNDIAVLRMLCRAHFVSSENEHFVDKDYYVKKVQAWSAQGHATVLERHTGVEYFSLFRSGTCLLVSVGVYEATDRPCTTFYDFVHKDAPLQYTCGHDILGIADVKGQHGLRVMLRDIVPILGGPSMALIYAVSSGCVAGFRFAKVELCRAEFSPRGKLGDLSWVHRCAPGFDVVPIANEAVVAAAMRAAHDEKLSSDIAHMLEGYDVPVGLLLNYDVAKAVCAIPHRRALNRLRYAGLLSRRTLLVPTITDARYDKVRPTSIIHNVDAQGKVVGHKWIVRVIMLLSVCGAAVAAYFVSNDEDVNRADILGTALAVGTVLLITLPQIFVETIGAGYSIGELYRGCLPMTVMMKRKDVAFLKECVRKGADVEGTICGRHGCFLLGRARGELEVGPVKVDDLDDRWDYGLNDKGVLCLRYRGVVGDMQVRERMINGKLCRWWHCAVVGSNIVKGVNKGEVLQYLGSGEIG 613
            MR FC AL+ AGVV+VT  + E   +SAWFG DTV   P R  +P GEVALLLRA+P + +N   +L  H       P    IA+LR LC A FVS+ENE FVDKDYY+KKVQAW A GHATVLERHTGVEYF+LFRSGTC+LVSVGVYEATDRPCT F+ FVH  + LQ+TCGHD+LGIADV+GQ  LR ML ++VPILGGPSMALIYAVSS  VA FRFAKVELCRA  S  G+LGDLSWV+RC P +DVVPIA+E VVA AMRA HDE L+ DIAH+LEG +VPVGLLL YDVAKAVCAIPH +A+NRLRYAGLLSRR LLVPT   AR+DKV+ +SIIH+VDA+G+VVG KW++RVI L S+C A V AY  S D +VN A++ GT +A+ TVLLITLPQ++VE IGAGYSI ELYRGC+PM  +M+R+ VAFLKEC+RKGADVEG I GRHGCFLLG ARG LEVGPVKVDDLDDRWDYGLND+GVLCLRYRG+VGDMQVRE+ ++GK+CRWWHCAVVGS IVKGV+K EVL  LG GEIG
Sbjct:    1 MREFCIALINAGVVIVTRRQAEQT-LSAWFGADTVSAAPIRRSMPTGEVALLLRANPDVVENDDNVLGFHRIYRDGVPLRRYIAMLRRLCAADFVSAENERFVDKDYYLKKVQAWFASGHATVLERHTGVEYFALFRSGTCVLVSVGVYEATDRPCTPFFHFVHAGSSLQHTCGHDMLGIADVEGQQALREMLLEVVPILGGPSMALIYAVSSSVVASFRFAKVELCRAVHSTGGRLGDLSWVYRCTPAYDVVPIADENVVAKAMRAVHDESLADDIAHLLEGDNVPVGLLLRYDVAKAVCAIPHSQAVNRLRYAGLLSRRDLLVPTAIYARHDKVQCSSIIHSVDAEGRVVGRKWLIRVIALFSLCAAVVTAYLFSLDRNVNSAEVFGTGIAMVTVLLITLPQLYVECIGAGYSIRELYRGCVPMAALMEREGVAFLKECLRKGADVEGVISGRHGCFLLGTARGGLEVGPVKVDDLDDRWDYGLNDRGVLCLRYRGIVGDMQVREQEVDGKMCRWWHCAVVGSTIVKGVSKCEVLDKLGQGEIG 545

The following BLAST results are available for this feature:

BLAST of Ggra7305.t1 vs. uniprot

BLAST of Ggra7305.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IXK9	6.610e-282	70.88	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 454..473
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 474..613
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..422
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 443..453
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 423..442
None	No IPR available	TMHMM	TMhelix		coord: 452..474
None	No IPR available	TMHMM	TMhelix		coord: 423..445

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000871_pilon	contig	tig00000871_pilon:683860..685701 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7305.t1	Ggra7305.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000871_pilon 683860..685701 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7305.t1 ID=Ggra7305.t1|Name=Ggra7305.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=614bp
MPLTAPKQLPQLTPIIFTCPTKSPQVIFQLATDFAQARGFSIAQRHRAVQ
SSLLCHHISGRSALQSVLWSARVMRSFCNALLGAGVVLVTDNRTEPAHVS
AWFGTDTVIVVPSRHGLPKGEVALLLRAHPKLAKNGGKMLRPHNPSPNDI
AVLRMLCRAHFVSSENEHFVDKDYYVKKVQAWSAQGHATVLERHTGVEYF
SLFRSGTCLLVSVGVYEATDRPCTTFYDFVHKDAPLQYTCGHDILGIADV
KGQHGLRVMLRDIVPILGGPSMALIYAVSSGCVAGFRFAKVELCRAEFSP
RGKLGDLSWVHRCAPGFDVVPIANEAVVAAAMRAAHDEKLSSDIAHMLEG
YDVPVGLLLNYDVAKAVCAIPHRRALNRLRYAGLLSRRTLLVPTITDARY
DKVRPTSIIHNVDAQGKVVGHKWIVRVIMLLSVCGAAVAAYFVSNDEDVN
RADILGTALAVGTVLLITLPQIFVETIGAGYSIGELYRGCLPMTVMMKRK
DVAFLKECVRKGADVEGTICGRHGCFLLGRARGELEVGPVKVDDLDDRWD
YGLNDKGVLCLRYRGVVGDMQVRERMINGKLCRWWHCAVVGSNIVKGVNK
GEVLQYLGSGEIG*