Ggra7296.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7296.t1
Unique NameGgra7296.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length368
Homology
BLAST of Ggra7296.t1 vs. uniprot
Match: A0A2V3J159 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J159_9FLOR)

HSP 1 Score: 451 bits (1159), Expect = 1.800e-154
Identity = 240/366 (65.57%), Postives = 290/366 (79.23%), Query Frame = 0
Query:    2 APVYNSNVVGLGQIAPPKAPVSRVPSSAGSAASSHRSSAVSSMSLGSAGGASSTGXXXXXXXXXXXXLLPPGTSMELDMNLDAIKDDSLESSKRASAKQKAKAKKERGLEFLEHVETGYDSDDDMPDDSFEYRNRDIAPYAGHLTDEGILLPVSLPGLRDLPPDFSEFVEEDLVSDLQKLSDGFNSLFPAEAPNPKDEPTVTLEPAKTEYATMDALNPNMFAEDTVARKLLSSESSLAFLQLPGLLTLNENPGAANIGEEQRPNEPSKQTSVAAAVTAGERMRGLGTDLRRVGEPGKAQYMGKLRVFKSGRVQLVMQCGDIIDLEHGVEPKVCQQVLLVNKTLKTCDELSNGYMPKVVGIPSLGLG 367
            APVY+ NVVGLGQIAPPKAPVSRVPSSAGSAASSHRSSAVSS+SLGS G ASSTG               P  ++++D+ + A+K++ L+S+   S KQK KAKK+R ++F EH+ETGYDSDDDM DDSFE RNRDIAPYAGHLT++GIL PVSLPGLRDLPP F EF++  ++  + K     + L     P  K EP   ++    +++T+  LNP  FA+ TVA+KLL+SE+SL F+QLPGLLT+NEN  A NIGEEQRP+EPS Q+SVAAAV+AGERMR LGTDLRRVGEPGK+QY+GKLR FKSGRVQLVMQCG++IDLE+GVEPKVCQQVLL++   KTCDE+SNGY+PKVVG+PSLGLG
Sbjct:   87 APVYSPNVVGLGQIAPPKAPVSRVPSSAGSAASSHRSSAVSSISLGSLGAASSTGAASSSTGIGF-----PDGAIDMDVAMAAMKEEGLDSTAGVS-KQKGKAKKDREMKFEEHIETGYDSDDDMSDDSFEQRNRDIAPYAGHLTEDGILFPVSLPGLRDLPPCFEEFIDGPMIPKVTKDKTDEHMLITETKPEAKAEP---MQFETNDFSTVQPLNPKSFADGTVAKKLLASEASLVFMQLPGLLTINENSAAGNIGEEQRPHEPSMQSSVAAAVSAGERMRALGTDLRRVGEPGKSQYIGKLRFFKSGRVQLVMQCGEVIDLENGVEPKVCQQVLLIDTGKKTCDEMSNGYLPKVVGVPSLGLG 443          
BLAST of Ggra7296.t1 vs. uniprot
Match: R7Q7U5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7U5_CHOCR)

HSP 1 Score: 231 bits (588), Expect = 1.650e-70
Identity = 132/268 (49.25%), Postives = 171/268 (63.81%), Query Frame = 0
Query:  110 LEFLEHVETGYDSDDDMPDDSFEYRNRDIAPYAGHLTDEGILLPVSLPGLRDLPPDFSEFVEEDLVSDLQKLSDGFNSLFPAEAPNPKDEPTVTLEPAKTEYATMDA----------LNPNMFAEDTVARKLLSSESSLAFLQLPGLLTLNE--NPGAANIGEEQRPNEPSKQTSVAAAVTAGERMRGLGTDLRRVGEPGKAQYMGKLRVFKSGRVQLVMQCGDIIDLEHGVEPKVCQQVLLVNKTLKTCDELSNGYMPKVVGIPSLG 365
            + F+EH+E   DSDDDM + SFE RN+DIAPYAG LT +G+LLPVSLPGLRDLPP++ +F  +    D   +SD              DE  VTL  +K E   +DA          L P MFA+ +VARK+LSS  SL F+QLPGLL L E  +    +  + Q P     ++SVAAAV A ERMRGLGTDLR+VGE G  + +GKLR FKSGRVQ+VM  G  I+LEHG+ PKV QQV++++   + C+EL N    ++VG+P+ G
Sbjct:   25 ISFMEHLEVADDSDDDMMETSFEARNKDIAPYAGKLTRDGLLLPVSLPGLRDLPPEYRDFESKGAHID---VSDD-------------DEEGVTLG-SKEEPMEIDAIDDGDNDAGNLRPEMFAKGSVARKVLSSHDSLTFMQLPGLLALMERKDTDGTSKNDRQEPEHDKVESSVAAAVAAAERMRGLGTDLRKVGERGSTRPVGKLRFFKSGRVQMVMGRGGCIELEHGISPKVTQQVVMIDTERQKCEELQNTLTSRLVGVPTFG 275          
The following BLAST results are available for this feature:
BLAST of Ggra7296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J1591.800e-15465.57Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q7U51.650e-7049.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:660443..661546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7296.t1Ggra7296.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 660443..661546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7296.t1 ID=Ggra7296.t1|Name=Ggra7296.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=368bp
MAPVYNSNVVGLGQIAPPKAPVSRVPSSAGSAASSHRSSAVSSMSLGSAG
GASSTGALSSTGGASSSGLLPPGTSMELDMNLDAIKDDSLESSKRASAKQ
KAKAKKERGLEFLEHVETGYDSDDDMPDDSFEYRNRDIAPYAGHLTDEGI
LLPVSLPGLRDLPPDFSEFVEEDLVSDLQKLSDGFNSLFPAEAPNPKDEP
TVTLEPAKTEYATMDALNPNMFAEDTVARKLLSSESSLAFLQLPGLLTLN
ENPGAANIGEEQRPNEPSKQTSVAAAVTAGERMRGLGTDLRRVGEPGKAQ
YMGKLRVFKSGRVQLVMQCGDIIDLEHGVEPKVCQQVLLVNKTLKTCDEL
SNGYMPKVVGIPSLGLG*
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