Ggra7289.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7289.t1
Unique NameGgra7289.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length134
Homology
BLAST of Ggra7289.t1 vs. uniprot
Match: A0A2V3J3Z1 (Coiled-coil domain-containing protein 12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3Z1_9FLOR)

HSP 1 Score: 181 bits (460), Expect = 1.060e-56
Identity = 96/133 (72.18%), Postives = 114/133 (85.71%), Query Frame = 0
Query:    1 MREENSSNEMEITKTSDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTGQGKLLSQPDDLQSLSSDDG 133
            M+E++SS        SD LKKLR QNY+PRTEELKKYCEE +E DA+LQQIL+EQ+++IRS+NRKF DPALDLDNIVPRKGNWD+K+SLAPKLQRLEQRTKRTL E+LREKQ  +G L+SQ DDL S+SSD+G
Sbjct:    1 MKEKSSSVNTGDADASDELKKLRFQNYIPRTEELKKYCEEGDELDALLQQILDEQESLIRSANRKFADPALDLDNIVPRKGNWDMKRSLAPKLQRLEQRTKRTLRELLREKQASEGNLVSQTDDLHSISSDEG 133          
BLAST of Ggra7289.t1 vs. uniprot
Match: R7Q7V0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7V0_CHOCR)

HSP 1 Score: 105 bits (262), Expect = 3.240e-26
Identity = 51/96 (53.12%), Postives = 78/96 (81.25%), Query Frame = 0
Query:   16 SDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREK 111
            + AL KLR QNY PRTE+LKK+ EE  +   +L++I E Q  +++S+NRKF DP+LDLDN++PRKG+WD++++L PKL+RLE+RT++ ++EI++ K
Sbjct:   51 NQALMKLRFQNYNPRTEKLKKFREEGSDPRELLREITEAQAELLKSTNRKFGDPSLDLDNLIPRKGSWDMERALQPKLERLEKRTEKAILEIVKRK 146          
BLAST of Ggra7289.t1 vs. uniprot
Match: A0A0T6AVW0 (Uncharacterized protein n=1 Tax=Oryctes borbonicus TaxID=1629725 RepID=A0A0T6AVW0_9SCAR)

HSP 1 Score: 64.7 bits (156), Expect = 1.710e-10
Identity = 35/101 (34.65%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   11 EITKTSDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREK 111
            E+TK +  L K + ++Y P+ E LK++ +     +A L  + EE +  ++S+  K +   LD+ N+ PRK +WD+K+ +A KL++LE+RT++ + E++RE+
Sbjct:   37 EVTKEAIELPKPKFRSYKPQAETLKEHLQ----PEAKLINVNEEIEEQLQSAQSKVVLEELDISNLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIRER 133          
BLAST of Ggra7289.t1 vs. uniprot
Match: coiled-coil domain-containing protein 12 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF28814 (coiled-coil domain-containing protein 12 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF28814)

HSP 1 Score: 64.7 bits (156), Expect = 1.750e-10
Identity = 38/120 (31.67%), Postives = 75/120 (62.50%), Query Frame = 0
Query:    1 MREENSSNEMEITKTSDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTGQGKLLS 120
            +RE+  ++  E  K  +  ++L+L+NY P+ E LK    E + + A  + + E+ +  + ++  + +   +DL N+ PRK +WD+K+ +A KL++LE+RT+R + E++RE+  GQ + L+
Sbjct:   27 LREDGGTDGEETEKQEEKHRELKLRNYTPQDESLK----ERQIAPAKPESVEEKVKEQLEAAKPEPIIEEVDLTNLAPRKPDWDLKRDVAKKLEKLEKRTQRAIAELIRERLKGQEENLA 142          
BLAST of Ggra7289.t1 vs. uniprot
Match: coiled-coil domain-containing protein 12 isoform X1 n=2 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI00148624A4 (coiled-coil domain-containing protein 12 isoform X1 n=2 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI00148624A4)

HSP 1 Score: 64.7 bits (156), Expect = 2.000e-10
Identity = 37/119 (31.09%), Postives = 75/119 (63.03%), Query Frame = 0
Query:    2 REENSSNEMEITKTSDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTGQGKLLS 120
            RE+      ++ +  +  ++LRL+NYVP  E+LK++     +  A+ +++ E+    + ++  + +   +DL N+ PRK +WD+K+ +A KL++LE+RT+R + E++RE+  GQ  +L+
Sbjct:   34 REDGEPQPKQLREEEEEHRELRLRNYVPEDEDLKRWRVPQAKPVAVEEKVKEQ----LEAAKPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKLEKRTQRAIAELIRERLKGQEDILA 148          
BLAST of Ggra7289.t1 vs. uniprot
Match: coiled-coil domain-containing protein 12 isoform X3 n=1 Tax=Manis javanica TaxID=9974 RepID=UPI000813450D (coiled-coil domain-containing protein 12 isoform X3 n=1 Tax=Manis javanica TaxID=9974 RepID=UPI000813450D)

HSP 1 Score: 63.2 bits (152), Expect = 5.680e-10
Identity = 37/100 (37.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   16 SDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTGQ 115
            S+  ++LRL+NYVP  EELKK      +  A+ +++ E+    + ++  + +   +DL N+ PRK +WD+K+ +A KL++LE+RT+R + E++RE+  GQ
Sbjct:   32 SEKHRELRLRNYVPEDEELKKRRVPQAKPVAVEEKVREQ----LEAAKPEPIIEEVDLANLAPRKPDWDLKRDVAKKLEKLEKRTQRAIAELIRERLKGQ 127          
BLAST of Ggra7289.t1 vs. uniprot
Match: F1RCD0 (Coiled-coil domain-containing 12 n=18 Tax=Teleostei TaxID=32443 RepID=F1RCD0_DANRE)

HSP 1 Score: 63.2 bits (152), Expect = 7.750e-10
Identity = 36/105 (34.29%), Postives = 67/105 (63.81%), Query Frame = 0
Query:   10 MEITKTSDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTG 114
            +E T+T D  ++L+L+NY P  EELK    E +   A    + ++ +  + ++N + +   +DL N+ PRK +WD+K+ +A KL++LE+RT++ + E++RE+  G
Sbjct:   43 LEDTETEDRHRELKLRNYTPEDEELK----ERQVPKAKPASVDDKVKDQLEAANPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKLERRTQKAIAELIRERLKG 143          
BLAST of Ggra7289.t1 vs. uniprot
Match: coiled-coil domain-containing protein 12-like n=2 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI0014862E01 (coiled-coil domain-containing protein 12-like n=2 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI0014862E01)

HSP 1 Score: 62.4 bits (150), Expect = 1.050e-9
Identity = 37/114 (32.46%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    2 REENSSNEMEITKTSDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTGQ 115
            RE+      E+ +  +  ++LRLQNYVP  E+LK+ C   +     +++ ++EQ   + ++  + +   +DL N+ PRK +WD+K+ +A KL++LE++T+  + E++RE+  GQ
Sbjct:   15 REDGEPQPKELREEEEEHRELRLQNYVPEGEDLKR-CRVPQAKPVAVEEKVKEQ---LEAAKPEPVIEEVDLANLAPRKPDWDLKRDVAKKLEKLEKQTQSAIAEMIRERLKGQ 124          
BLAST of Ggra7289.t1 vs. uniprot
Match: F6X454 (Uncharacterized protein n=2 Tax=Monodelphis domestica TaxID=13616 RepID=F6X454_MONDO)

HSP 1 Score: 62.8 bits (151), Expect = 1.070e-9
Identity = 35/94 (37.23%), Postives = 61/94 (64.89%), Query Frame = 0
Query:   22 LRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTGQ 115
            L+ QNYVP  EELKK      +  ++ +++ ++ +A +       +   +DL N+ PRK +WD+K+ LA K+++LE+RT+RT+ E++RE+  GQ
Sbjct:   58 LKFQNYVPEDEELKKRKRPQVKPASVKEKVKDQLEAAMPQP----ITEEVDLANLAPRKPDWDLKRDLAKKMEKLEKRTQRTIAELIRERLRGQ 147          
BLAST of Ggra7289.t1 vs. uniprot
Match: G3TNW4 (Uncharacterized protein n=1 Tax=Loxodonta africana TaxID=9785 RepID=G3TNW4_LOXAF)

HSP 1 Score: 61.2 bits (147), Expect = 1.530e-9
Identity = 35/96 (36.46%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   20 KKLRLQNYVPRTEELKKYCEETEESDAMLQQILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRTKRTLVEILREKQTGQ 115
            ++LRL+NYVP  E+LKK      +  A+ +++ E+    + ++  + +   +DL N+ PRK +WD+K+ +A KL++LE+RT+R + E++RE+  GQ
Sbjct:    3 RELRLRNYVPEDEDLKKRRVPQAKPVAVEEKVKEQ----LEAAKPEPIIEEVDLANLAPRKPDWDLKRDVAKKLEKLEKRTQRAIAELIRERLKGQ 94          
The following BLAST results are available for this feature:
BLAST of Ggra7289.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3Z11.060e-5672.18Coiled-coil domain-containing protein 12 n=1 Tax=G... [more]
R7Q7V03.240e-2653.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0T6AVW01.710e-1034.65Uncharacterized protein n=1 Tax=Oryctes borbonicus... [more]
coiled-coil domain-containing protein 12 n=2 Tax=Bufo TaxID=8383 RepID=UPI001CF288141.750e-1031.67coiled-coil domain-containing protein 12 n=2 Tax=B... [more]
coiled-coil domain-containing protein 12 isoform X1 n=2 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI00148624A42.000e-1031.09coiled-coil domain-containing protein 12 isoform X... [more]
coiled-coil domain-containing protein 12 isoform X3 n=1 Tax=Manis javanica TaxID=9974 RepID=UPI000813450D5.680e-1037.00coiled-coil domain-containing protein 12 isoform X... [more]
F1RCD07.750e-1034.29Coiled-coil domain-containing 12 n=18 Tax=Teleoste... [more]
coiled-coil domain-containing protein 12-like n=2 Tax=Arvicanthis niloticus TaxID=61156 RepID=UPI0014862E011.050e-932.46coiled-coil domain-containing protein 12-like n=2 ... [more]
F6X4541.070e-937.23Uncharacterized protein n=2 Tax=Monodelphis domest... [more]
G3TNW41.530e-936.46Uncharacterized protein n=1 Tax=Loxodonta africana... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013169mRNA splicing factor Cwf18-likePFAMPF08315cwf18coord: 5..111
e-value: 1.2E-17
score: 64.8
IPR013169mRNA splicing factor Cwf18-likePANTHERPTHR31551PRE-MRNA-SPLICING FACTOR CWF18coord: 7..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:638631..639145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7289.t1Ggra7289.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 638631..639145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7289.t1 ID=Ggra7289.t1|Name=Ggra7289.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=134bp
MREENSSNEMEITKTSDALKKLRLQNYVPRTEELKKYCEETEESDAMLQQ
ILEEQQAMIRSSNRKFMDPALDLDNIVPRKGNWDIKKSLAPKLQRLEQRT
KRTLVEILREKQTGQGKLLSQPDDLQSLSSDDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013169mRNA_splic_Cwf18-like