Ggra7288.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7288.t1
Unique NameGgra7288.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length194
Homology
BLAST of Ggra7288.t1 vs. uniprot
Match: A0A2V3J164 (ADP-ribosylation factor-like protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J164_9FLOR)

HSP 1 Score: 342 bits (878), Expect = 1.810e-118
Identity = 166/193 (86.01%), Postives = 183/193 (94.82%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGLMTILRKVKARERE+R+LVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCR ELE +LMEERLAGASLL+LANKQD+SGAL+TE ++EHLALNDMIG+KRHWQVF  SAL++DH A++EN L  SIEWLV +++SRI+LAD
Sbjct:    1 MGLMTILRKVKAREREMRILVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRAELETILMEERLAGASLLVLANKQDLSGALTTESVVEHLALNDMIGKKRHWQVFPSSALAEDHTADVENLLMRSIEWLVHDIASRILLAD 193          
BLAST of Ggra7288.t1 vs. uniprot
Match: R7Q845 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q845_CHOCR)

HSP 1 Score: 292 bits (747), Expect = 1.650e-98
Identity = 139/193 (72.02%), Postives = 167/193 (86.53%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TILRKVK +ERE+R+L+LGLDNAGKTT +K LKGEDVH+VSPTLGFDI+T++FD Y+LN+WDVGGQQTIR YWRNYFEQTDGIIWVVDSAD  RL+DCR ELE LL EERLAGASLLILANKQD++GALS E I+  LALND+IGRKRHWQVF CSA S +  +     L +S++WLV++++SRI ++D
Sbjct:    1 MGLLTILRKVKEKEREMRILILGLDNAGKTTFVKHLKGEDVHTVSPTLGFDIDTMDFDGYRLNIWDVGGQQTIRAYWRNYFEQTDGIIWVVDSADTRRLADCRKELEGLLKEERLAGASLLILANKQDLAGALSPEGIVAELALNDVIGRKRHWQVFPCSAYSREEGSKSTTNLAQSLQWLVEDIASRIFVSD 193          
BLAST of Ggra7288.t1 vs. uniprot
Match: A0A5A8DKS8 (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DKS8_CAFRO)

HSP 1 Score: 243 bits (619), Expect = 3.960e-79
Identity = 117/193 (60.62%), Postives = 153/193 (79.27%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TIL+K+K +E+EIR+L+LGLDNAGKTTI+K+  GED+ ++SPTLGF+I TLE+D YKLN+WDVGGQ+T+R+YWRNY+E+TDG+IWVVDSAD  RL DC+ E  KLL +E+LAGA+LL+LANKQDISGALS + I   L L      KRHW++  CSA++ D        L  S++WLV+++SSRI L D
Sbjct:    1 MGLLTILKKLKQKEKEIRLLILGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEYDGYKLNVWDVGGQKTLRSYWRNYYEETDGVIWVVDSADRRRLRDCKEEFGKLLGQEKLAGATLLVLANKQDISGALSMDDIATALELGGESTAKRHWKIEPCSAVTGDG-------LEASVDWLVRDISSRIFLGD 186          
BLAST of Ggra7288.t1 vs. uniprot
Match: W4H472 (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4H472_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.610e-78
Identity = 114/193 (59.07%), Postives = 152/193 (78.76%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TIL+KVK +E+E+R+L+LGLDNAGKTTI+K+  G+D+ S+SPTLGFDI TLE+ +YKLN+WDVGGQQTIR+YWRNYFEQTDG++WVVDSAD  RL DC+ EL  LL +E+LAGA+LLI ANKQD+ GALS E I+  L L++     RHW++ +CSA + D        L + I+W+V ++S+RI + +
Sbjct:    1 MGLLTILKKVKRKEKELRILMLGLDNAGKTTILKKFMGQDISSISPTLGFDIQTLEYKQYKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRLEDCKRELVALLTQEKLAGATLLIFANKQDLPGALSPEDIVLALGLHESQFANRHWKIHSCSAFTGDG-------LADGIDWMVSDISNRIYMLE 186          
BLAST of Ggra7288.t1 vs. uniprot
Match: A0A7S0HUQ5 (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HUQ5_9EUKA)

HSP 1 Score: 240 bits (613), Expect = 5.170e-78
Identity = 118/193 (61.14%), Postives = 150/193 (77.72%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TIL+KVK +ERE+RVL+LGLDNAGKTT++K+  GED+  +SPTLGF+I TLE+  +KLN+WDVGGQ ++R+YWRNYFEQTDG+IWVVDSAD  RL DC+ EL+ LL +ERLAGASLL+ ANKQDI GALS EQI E L L D    KRHW++ ACSA +          L   ++W+VQ+++SRI + D
Sbjct:   16 MGLLTILKKVKQKEREVRVLMLGLDNAGKTTVVKKFNGEDIDLISPTLGFNIKTLEYRGFKLNIWDVGGQTSLRSYWRNYFEQTDGLIWVVDSADRMRLRDCKAELQALLQQERLAGASLLVFANKQDIEGALSDEQIREELEL-DKFCAKRHWRICACSAFTG-------GGLAAGVDWMVQDIASRIFMYD 200          
BLAST of Ggra7288.t1 vs. uniprot
Match: A0A8J6C209 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C209_DIALT)

HSP 1 Score: 239 bits (610), Expect = 8.670e-78
Identity = 119/193 (61.66%), Postives = 155/193 (80.31%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TIL+KVK +ERE+R+LVLGLDNAGKTTI+K+  GED+ +++PTLGF+I TLE+ +YKLN+WD+GGQ ++R+YWRNYFEQTDG+IWVVDSAD  RL DC+ ELEKLL+EERLAGASLL+ ANKQDI GALS E+I + L L D I R RHW + +CSA++ +        L   ++W+V +++SRI L D
Sbjct:    1 MGLLTILKKVKQKERELRLLVLGLDNAGKTTIVKKFNGEDIDTIAPTLGFNIKTLEYKEYKLNLWDIGGQTSLRSYWRNYFEQTDGLIWVVDSADKRRLLDCKAELEKLLVEERLAGASLLVFANKQDIVGALSPEEIQQVLGL-DAITR-RHWCICSCSAVTGEG-------LVAGVDWMVADIASRIFLYD 184          
BLAST of Ggra7288.t1 vs. uniprot
Match: E1ZI02 (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZI02_CHLVA)

HSP 1 Score: 239 bits (609), Expect = 1.230e-77
Identity = 119/193 (61.66%), Postives = 152/193 (78.76%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+ I+RKVK +E EIR+L++GLDNAGKTTI+KR+ GED  +VSPTLGF+I TLEF  Y+LN+WDVGGQ+T+R YWRNYFEQTDG++WVVDS D  RL+DC  EL KLL+EERLAGA+LLI+ANKQD+ GALS E I E L L+ ++GR+  W + ACSA++        + L E  +W+VQ+V+SRI L D
Sbjct:    1 MGLLHIIRKVKCKEHEIRLLLVGLDNAGKTTIVKRISGEDASTVSPTLGFNIKTLEFGGYQLNVWDVGGQKTLRPYWRNYFEQTDGLVWVVDSTDRRRLADCAEELGKLLLEERLAGATLLIMANKQDVPGALSAEAIREALQLDSLVGRQ--WSIVACSAVNG-------SGLLEGFQWMVQDVASRIYLLD 184          
BLAST of Ggra7288.t1 vs. uniprot
Match: A0A0M0K643 (ADP-ribosylation factor-like 2 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K643_9EUKA)

HSP 1 Score: 238 bits (607), Expect = 2.650e-77
Identity = 111/193 (57.51%), Postives = 153/193 (79.27%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TIL++ K +ERE+R+L+LGLDNAGKTT++K+  GE++ ++SPTLGF+I TLE+  +KLN+WD+GGQ ++R+YWRNYFEQTDG+IWVVDSAD ARL DC+ EL++LL +ERLAGASLL+ ANKQDI GAL+ EQI   L L+++   KRHW++ ACSA +          L   ++W+VQ+++SRI + D
Sbjct:    1 MGLLTILKRQKQKEREVRLLMLGLDNAGKTTVVKKFNGEEIDTISPTLGFNIKTLEYRGFKLNIWDIGGQTSLRSYWRNYFEQTDGLIWVVDSADRARLQDCKAELQQLLQQERLAGASLLVFANKQDIVGALTAEQIRAELGLDELSATKRHWRIEACSAFTGAG-------LAAGVDWVVQDIASRIFMHD 186          
BLAST of Ggra7288.t1 vs. uniprot
Match: A0A067CM79 (ADP-ribosylation factor-like protein 2 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CM79_SAPPC)

HSP 1 Score: 238 bits (606), Expect = 3.760e-77
Identity = 111/193 (57.51%), Postives = 152/193 (78.76%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TIL+KVK +E+E+R+LVLGLDNAGKTTI+K+  G+D+ ++SPTLGFDI TLE+ ++KLN+WDVGGQQTIR+YWRNYFEQTDG++WVVDSAD  R+ DC+ EL  LL +E+L GA+LLI ANKQD+ GALS ++I+  L L++     RHW++ +CSA + D        L E I+W+V ++++RI L +
Sbjct:    1 MGLLTILKKVKQKEKEVRILVLGLDNAGKTTILKKFMGQDITTISPTLGFDIQTLEYKQFKLNVWDVGGQQTIRSYWRNYFEQTDGLVWVVDSADRRRMDDCKRELAALLTQEKLTGATLLIFANKQDLPGALSPDEIVVALGLHEAQFENRHWKIQSCSAFTGDG-------LVEGIDWMVTDIANRIYLLE 186          
BLAST of Ggra7288.t1 vs. uniprot
Match: A0A2R5GWI2 (ADP-ribosylation factor n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWI2_9STRA)

HSP 1 Score: 238 bits (606), Expect = 3.760e-77
Identity = 113/193 (58.55%), Postives = 151/193 (78.24%), Query Frame = 0
Query:    1 MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGFDINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLSDCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGRKRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD 193
            MGL+TIL+K K +E+++R+L+LGLDNAGKTTI+K+  GED+ ++SPTLGF+I TLE   Y+LN+WDVGGQ TIR+YWRNYFE+TDG+IWVVD AD  RL+ CR EL KLL +E+LAGAS+L+ ANKQD++GALS+EQI E L L   I + RHWQ+  CSA++ D        L + ++W+V +++SRI L D
Sbjct:    1 MGLLTILKKQKLKEKQMRILMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGYQLNVWDVGGQTTIRSYWRNYFEETDGLIWVVDCADRERLATCRDELHKLLQQEKLAGASVLVFANKQDLAGALSSEQIAEVLELGSPIFKNRHWQIHPCSAVTGDG-------LVDGVDWIVDDIASRIYLMD 186          
The following BLAST results are available for this feature:
BLAST of Ggra7288.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1641.810e-11886.01ADP-ribosylation factor-like protein 2 n=1 Tax=Gra... [more]
R7Q8451.650e-9872.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5A8DKS83.960e-7960.62Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
W4H4721.610e-7859.07Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A7S0HUQ55.170e-7861.14Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A8J6C2098.670e-7861.66Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
E1ZI021.230e-7761.66Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A0M0K6432.650e-7757.51ADP-ribosylation factor-like 2 n=1 Tax=Chrysochrom... [more]
A0A067CM793.760e-7757.51ADP-ribosylation factor-like protein 2 n=4 Tax=Sap... [more]
A0A2R5GWI23.760e-7758.55ADP-ribosylation factor n=1 Tax=Hondaea fermentalg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 18..41
score: 56.86
coord: 73..98
score: 33.71
coord: 118..139
score: 40.11
coord: 46..70
score: 29.65
IPR006689Small GTPase superfamily, ARF/SAR typeSMARTSM00178sar_sub_1coord: 3..185
e-value: 6.2E-25
score: 98.8
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 4..183
e-value: 5.8E-64
score: 214.7
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..189
e-value: 2.4E-43
score: 160.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 17..188
e-value: 0.0033
score: -69.7
NoneNo IPR availablePANTHERPTHR45697:SF2ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2coord: 1..192
NoneNo IPR availablePROSITEPS51417ARFcoord: 10..185
score: 21.651501
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 15..141
e-value: 8.6E-20
score: 69.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 13..192
e-value: 2.2E-65
score: 221.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..176
IPR044612ADP-ribosylation factor-like protein 2/3PANTHERPTHR45697ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATEDcoord: 1..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:637414..637995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7288.t1Ggra7288.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 637414..637995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7288.t1 ID=Ggra7288.t1|Name=Ggra7288.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=194bp
MGLMTILRKVKAREREIRVLVLGLDNAGKTTIMKRLKGEDVHSVSPTLGF
DINTLEFDKYKLNMWDVGGQQTIRTYWRNYFEQTDGIIWVVDSADVARLS
DCRTELEKLLMEERLAGASLLILANKQDISGALSTEQIIEHLALNDMIGR
KRHWQVFACSALSDDHNANIENRLTESIEWLVQEVSSRIMLAD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
IPR044612ARL2/3