Ggra7278.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7278.t1
Unique NameGgra7278.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length116
Homology
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A2V3J0Z5 (Tubulin-specific chaperone A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Z5_9FLOR)

HSP 1 Score: 139 bits (351), Expect = 1.170e-40
Identity = 78/115 (67.83%), Postives = 90/115 (78.26%), Query Frame = 0
Query:    1 MKSADHPSLRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCSNDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDDPDVTSAIVDSQELQSATAAVSAASKKLQS 115
            M S     LRTLKIKTAVV RI KELDSY+ ELEDN++ VE+IR S+DHSKLKQMENVLGETQCMIPDT TRL+NA+DDLSALLD       +  + EL  ATAA+S ASKK++S
Sbjct:    1 MASISEAPLRTLKIKTAVVERISKELDSYYAELEDNKKTVEEIRRSDDHSKLKQMENVLGETQCMIPDTMTRLTNAIDDLSALLDSNSTNELLAGTPELDRATAAISNASKKVES 115          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A8B8FMK9 (Tubulin-specific chaperone A n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8FMK9_9HEMI)

HSP 1 Score: 67.0 bits (162), Expect = 4.560e-12
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDD 86
            P ++TLKIKT VV R+ KE   Y +E E  R +VE+++ S  D S LK+ E VL E+Q MIPDT  RL  A  DL +++ D
Sbjct:    4 PRIKTLKIKTGVVKRLTKEKLMYIKETEQQREKVEKLKASGIDESNLKKQEEVLRESQMMIPDTQRRLKAAFQDLKSVIAD 84          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A1Y2BZ78 (Tubulin-specific chaperone A n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BZ78_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 7.600e-11
Identity = 49/109 (44.95%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    8 SLRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCSN--DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDDPDVTSA-IVDSQELQSATAAVSAASKKL 113
            S RTLKIKT VV R++KEL SY +E    + +++++  +N  DH+  KQ E VL ET  MIPD   RL  A DDL  L+ D   +SA   +S+EL +A  A++A   KL
Sbjct:    5 SSRTLKIKTGVVTRLVKELGSYEKEAVKQQERIDKLVAANEDDHTVRKQKE-VLEETTTMIPDCKNRLLAAKDDLQKLVADILASSADAAESEELIAAQEAINAIPLKL 112          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A5E4MGM5 (Tubulin-specific chaperone A n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4MGM5_9HEMI)

HSP 1 Score: 61.2 bits (147), Expect = 7.750e-10
Identity = 36/81 (44.44%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCS-NDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDD 86
            P ++TLKIKT VV R+ KE   Y +E +    +V++++ S +D S +K+ E VL E+Q MIPDT  RL  A DDL +++ D
Sbjct:    4 PRIKTLKIKTGVVKRLTKEKLMYIKETDQQLEKVKKLKESGSDESVIKKQEEVLRESQMMIPDTQRRLKAAFDDLKSVIAD 84          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A507E2G4 (Tubulin-specific chaperone A n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507E2G4_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 2.390e-9
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    8 SLRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCSN--DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDD 86
            S RTLKIKT VV R++KEL SY  E    +++++ +  +N  DH   KQ E VL ET  MIPD   RLS A D+L  L+ D
Sbjct:    5 SARTLKIKTGVVTRLVKELSSYEREEITQQKRIDALITANADDHDVRKQRE-VLEETTTMIPDCKNRLSAARDELQRLVSD 84          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A6G0YRY6 (Tubulin-specific chaperone A n=6 Tax=Aphidinae TaxID=133076 RepID=A0A6G0YRY6_APHCR)

HSP 1 Score: 59.3 bits (142), Expect = 4.440e-9
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 0
Query:    7 PSLRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDD 86
            P ++TLKIKT VV R+ KE   Y +E E    +V++++ +  D S  K+ E VL E+Q MIPDT  RL  A +DL +++ D
Sbjct:    4 PRIKTLKIKTGVVKRLTKEKLMYIQETEQQLEKVQKLKEAGIDESTFKKQEEVLRESQMMIPDTQRRLKAAFEDLKSVVAD 84          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A2S4W4N9 (Tubulin-specific chaperone A n=1 Tax=Puccinia striiformis TaxID=27350 RepID=A0A2S4W4N9_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 6.410e-9
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   10 RTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIR--CSNDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL 84
            R LKIKT VV R+IKE DSY  E ++  +++E+I+    +D   +++ + VL ET  MIPD   RLS AV++L+ L+
Sbjct:    4 RPLKIKTGVVERLIKEEDSYKNEYDNQLKRIEKIKQETPDDEWNIRKQKEVLDETVKMIPDVKQRLSKAVEELNDLV 80          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A0C3QU54 (Tubulin-specific chaperone A n=2 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QU54_9AGAM)

HSP 1 Score: 58.9 bits (141), Expect = 6.860e-9
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 0
Query:   10 RTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCSN-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLD 85
            + L+IK+ VV R+IKEL  Y +E E   R+VE+++    + + ++Q ENVL E Q M+PD   R+S AV+DL  + D
Sbjct:    9 KQLRIKSGVVERLIKELGVYQKEEEAEVRRVEKLKAEGAEGADIRQAENVLKEAQKMVPDAQKRMSGAVEDLRGVFD 85          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A0L0VNW3 (Tubulin-specific chaperone A n=1 Tax=Puccinia striiformis f. sp. tritici PST-78 TaxID=1165861 RepID=A0A0L0VNW3_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 7.500e-9
Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   10 RTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIR--CSNDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL 84
            R LKIKT VV R+IKE DSY  E ++  +++E+I+    +D   +++ + VL ET  MIPD   RLS AV++L+ L+
Sbjct:    4 RPLKIKTGVVERLIKEEDSYKNEYDNQLKRIEKIKQETPDDEWNIRKQKEVLDETVKMIPDVKQRLSKAVEELNDLV 80          
BLAST of Ggra7278.t1 vs. uniprot
Match: A0A177VUJ4 (Tubulin-specific chaperone A n=4 Tax=Tilletia TaxID=13289 RepID=A0A177VUJ4_9BASI)

HSP 1 Score: 58.9 bits (141), Expect = 8.190e-9
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    9 LRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQ-IRCSNDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDDPD 88
            L+ LKIKT VVNR++KE  SY +E+E   + ++  I    D   + + + VL E++ MIPDT  RL  A+ DL  LL+D D
Sbjct:    5 LKQLKIKTGVVNRLVKEEVSYKKEVEQQEKHIQSLIDQGQDKWTVNKQKEVLQESRVMIPDTQRRLQAAISDLDLLLEDLD 85          
The following BLAST results are available for this feature:
BLAST of Ggra7278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3J0Z51.170e-4067.83Tubulin-specific chaperone A n=1 Tax=Gracilariopsi... [more]
A0A8B8FMK94.560e-1248.15Tubulin-specific chaperone A n=1 Tax=Sipha flava T... [more]
A0A1Y2BZ787.600e-1144.95Tubulin-specific chaperone A n=1 Tax=Rhizoclosmati... [more]
A0A5E4MGM57.750e-1044.44Tubulin-specific chaperone A n=1 Tax=Cinara cedri ... [more]
A0A507E2G42.390e-948.15Tubulin-specific chaperone A n=2 Tax=Chytriomyces ... [more]
A0A6G0YRY64.440e-943.21Tubulin-specific chaperone A n=6 Tax=Aphidinae Tax... [more]
A0A2S4W4N96.410e-944.16Tubulin-specific chaperone A n=1 Tax=Puccinia stri... [more]
A0A0C3QU546.860e-942.86Tubulin-specific chaperone A n=2 Tax=Tulasnella ca... [more]
A0A0L0VNW37.500e-944.16Tubulin-specific chaperone A n=1 Tax=Puccinia stri... [more]
A0A177VUJ48.190e-943.21Tubulin-specific chaperone A n=4 Tax=Tilletia TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..46
NoneNo IPR availableGENE3D1.20.58.90coord: 5..114
e-value: 4.2E-27
score: 96.4
NoneNo IPR availablePANTHERPTHR21500:SF0TUBULIN-SPECIFIC CHAPERONE Acoord: 9..107
IPR004226Tubulin binding cofactor APFAMPF02970TBCAcoord: 8..105
e-value: 2.4E-24
score: 85.5
IPR004226Tubulin binding cofactor APANTHERPTHR21500TUBULIN-SPECIFIC CHAPERONE Acoord: 9..107
IPR036126Tubulin binding cofactor A superfamilySUPERFAMILY46988Tubulin chaperone cofactor Acoord: 7..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:613480..614105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7278.t1Ggra7278.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 613480..614105 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7278.t1 ID=Ggra7278.t1|Name=Ggra7278.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=116bp
MKSADHPSLRTLKIKTAVVNRIIKELDSYHEELEDNRRQVEQIRCSNDHS
KLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDDPDVTSAIVDSQELQ
SATAAVSAASKKLQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004226TBCA
IPR036126TBCA_sf