Ggra7274.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7274.t1
Unique NameGgra7274.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length178
Homology
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A2V3J3W9 (Vacuolar protein-sorting-associated protein 25 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3W9_9FLOR)

HSP 1 Score: 327 bits (839), Expect = 4.770e-113
Identity = 148/177 (83.62%), Postives = 165/177 (93.22%), Query Frame = 0
Query:    1 MSEYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVWDPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKFVN 177
            MS+++FPPF+SFPPSFTRQPIE TRAKQTELWCNLIRDYCRVKRIFWLD+SKA+ES+LF N AIDRRLSDEDIQYFL QLV +GDA WDPD+KRCLVFWR PS+WGE+IYQW+E TGRNGQLLTVHEIRKGSATIGYEFHDLELDTT++SLQAL  IGKC +++GD DDGLGVKFVN
Sbjct:    1 MSDFDFPPFYSFPPSFTRQPIEATRAKQTELWCNLIRDYCRVKRIFWLDVSKAKESNLFANPAIDRRLSDEDIQYFLSQLVARGDAQWDPDRKRCLVFWRGPSEWGEMIYQWVEKTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTIKSLQALAVIGKCALVKGDSDDGLGVKFVN 177          
BLAST of Ggra7274.t1 vs. uniprot
Match: R7QAD2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAD2_CHOCR)

HSP 1 Score: 303 bits (775), Expect = 2.720e-103
Identity = 133/175 (76.00%), Postives = 159/175 (90.86%), Query Frame = 0
Query:    1 MSEYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVWDPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKF 175
            M++Y FPPFHSFPPS+TRQP+E TRAKQT+LWC+LIRDYCRV  IFWLD+S ARES+LF N AIDRRLSD+D++YFLGQLV +GDA WDPD+KRCLVFWR+PSDWG+LIYQW++ TG+NG+LLTVHEIRKGSAT+G EFH LELDTT+R+LQALEA+GKC +++GD  D LGVKF
Sbjct:    1 MAQYVFPPFHSFPPSYTRQPVEATRAKQTQLWCDLIRDYCRVHHIFWLDVSVARESNLFSNPAIDRRLSDDDVRYFLGQLVARGDAEWDPDRKRCLVFWRQPSDWGQLIYQWVDATGKNGELLTVHEIRKGSATVGREFHGLELDTTIRALQALEALGKCAIVQGDSADSLGVKF 175          
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A7S3E7W9 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E7W9_9RHOD)

HSP 1 Score: 210 bits (534), Expect = 1.260e-66
Identity = 96/169 (56.80%), Postives = 126/169 (74.56%), Query Frame = 0
Query:    1 MSEYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVWDPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDD 169
            +SE+ FP F+SFPPSFTRQPI  TR KQ  LW +LIRDYC+  RIFWLD+++A  S LF N A+ RRLS ED ++FLG+LV +GDA WD +++RCL++WRRP++WG LIY W+E+ GRNG ++TV+EIR G  T G EF +LELD T+++L  LE  GK  V   +  D
Sbjct:    7 VSEFKFPAFYSFPPSFTRQPIPATREKQIRLWGDLIRDYCQHYRIFWLDVAQAAASPLFNNKAVSRRLSLEDARFFLGELVSRGDAEWDQNQQRCLIYWRRPAEWGGLIYDWVESVGRNGTVMTVYEIRLGEETKGEEFFNLELDLTLKALADLELSGKAAVFGTERSD 175          
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A7S0ZGH4 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGH4_9RHOD)

HSP 1 Score: 201 bits (511), Expect = 5.620e-63
Identity = 88/170 (51.76%), Postives = 118/170 (69.41%), Query Frame = 0
Query:    4 YNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVWDPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGV 173
            ++FP FHSF P++T+QP++ T  KQT LWC+L  DYCR   + WLDI KA   SLF N +I RR+  ED+ YFLG LV +GDA+WD  + RCLVFWRRP +WG++IY+WIE TG NG L+TV+E+R    T    FH L+L+  + +L ALE+ GK  +  G+  D +GV
Sbjct:   17 FHFPAFHSFAPAYTKQPVKSTLQKQTALWCDLTLDYCRHYNVLWLDIVKATNCSLFVNPSIARRMRGEDVAYFLGALVERGDAIWDASRSRCLVFWRRPEEWGDIIYRWIEATGNNGSLMTVYELRLSETTRNEPFHALDLEMMLLALSALESTGKAALFSGEKSDSVGV 186          
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A5J4YWD2 (Vacuolar protein-sorting-associated protein 25 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWD2_PORPP)

HSP 1 Score: 186 bits (472), Expect = 4.000e-57
Identity = 81/178 (45.51%), Postives = 122/178 (68.54%), Query Frame = 0
Query:    2 SEYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVWDPD---KKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKFV 176
            S ++FP FH+FPPS+TRQP+  TR KQ  LWC+L+  +C+ +  FW+D+++  +S LF N+AI+RR+  ED+ +   +LV +GDA WD     K RCLVFWR P++WG+L+Y +I+ TG+N  ++T++E+R    T G  FH+L+LD  + +LQ+LE   K  +  G   D LGVKF+
Sbjct:    4 SAFHFPAFHAFPPSYTRQPVRATREKQVSLWCDLMLAFCKHRGDFWVDMAEITQSELFVNAAINRRMKGEDVVFLFDELVNRGDAQWDVQGAGKTRCLVFWRSPAEWGDLVYTYIDRTGQNNSVMTLYELRCSDMTKGEPFHNLDLDLMLLALQSLELANKAAIFEGAKSDQLGVKFL 181          
BLAST of Ggra7274.t1 vs. uniprot
Match: M2XPN1 (ESCRT-II complex subunit VPS25 isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XPN1_GALSU)

HSP 1 Score: 176 bits (446), Expect = 3.110e-53
Identity = 79/176 (44.89%), Postives = 117/176 (66.48%), Query Frame = 0
Query:    1 MSEYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVW-DPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKF 175
            M+ + +PPF+S+PPSFT QP++ TR KQ +LWC+L+  YC+  +IF L ++ +  SSLF N+AIDR+LS   ++    +LV  G   W + +   CL++WRRP +W E+IY W+E +G+   +LT +EIR    T  +EFH ++ +  +RSLQ LE+ GKC V  G  +D LGVKF
Sbjct:    1 MTVFRYPPFYSYPPSFTLQPVKATREKQLKLWCDLVLSYCKHYKIFKLSVTDSANSSLFANTAIDRKLSLAAVEEVFSRLVSMGYGEWLNKEANVCLIYWRRPYEWAEIIYDWVERSGKRKSILTFYEIRFSEDTAEFEFHGIDPELLLRSLQVLESQGKCAVFEGKTNDDLGVKF 176          
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A096LTH9 (Vacuolar protein-sorting-associated protein 25 n=9 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A096LTH9_POEFO)

HSP 1 Score: 160 bits (405), Expect = 4.660e-47
Identity = 82/174 (47.13%), Postives = 108/174 (62.07%), Query Frame = 0
Query:    3 EYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVW-DPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKF 175
            +YNFPPF      FT QP  +TR KQ   WC+L+  YCR  +++ +D+ +A+ES +F N  I+R+LS E IQ    +L  KG+  W D +K RCLV WRRP +WG+LIYQW+   G N  + T++E+  G  T G EFH LE     RSLQAL+  GK  +I    DDG GVKF
Sbjct:    8 QYNFPPF------FTLQPNVDTRQKQLAAWCSLVLSYCRHHKLYTVDVMEAQESPVFNNKKIERKLSVEAIQVVFEELRKKGNLEWLDKNKSRCLVMWRRPEEWGKLIYQWVSKNGMNNSVFTLYELSNGDDTDGEEFHGLEDWMLQRSLQALQTEGKAEII--SMDDGKGVKF 173          
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A3B3HZI6 (Vacuolar protein-sorting-associated protein 25 n=92 Tax=Clupeocephala TaxID=186625 RepID=A0A3B3HZI6_ORYLA)

HSP 1 Score: 159 bits (401), Expect = 1.880e-46
Identity = 82/174 (47.13%), Postives = 108/174 (62.07%), Query Frame = 0
Query:    3 EYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVW-DPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKF 175
            +YNFPPF      FT QP  +TR KQ E WC+L   YCR  +++ LD+ +A+ES +F N  I+R+LS E IQ    +L  KG+  W D +K RCLV WRRP +WG+LIYQW+   G    + T++E+  G  T G EFH LE    +RSLQAL+  G+  +I    DDG GVKF
Sbjct:    8 QYNFPPF------FTLQPNADTRQKQLEAWCSLALSYCRHHKLYTLDVMEAQESPMFNNKKIERKLSMEAIQIVFEELRKKGNLEWLDKNKLRCLVMWRRPEEWGKLIYQWVSKNGMVNSVFTLYELSNGDDTQGEEFHGLEEWMLLRSLQALQTDGRAEII--SMDDGKGVKF 173          
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A8C4CRB6 (Vacuolar protein-sorting-associated protein 25 n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4CRB6_9TELE)

HSP 1 Score: 157 bits (398), Expect = 5.520e-46
Identity = 80/176 (45.45%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    1 MSEYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVW-DPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKF 175
            M  + +P  ++FPP FT QP  +TR KQ   WC+L   YCR ++++ LD+ +A+ES+LF N  I R+LS E IQ    +L  KG+  W D +K RCL+ WRRP +WG+LIYQW+   G    + T++E+  G  T   EFH LE    +R+LQAL++ GK  VI    DDG GVKF
Sbjct:    1 MQSFEWPWQYNFPPFFTLQPNVDTRQKQLAAWCSLALSYCRHRKLYTLDVLEAQESALFNNKKISRKLSVEAIQVIFEELRKKGNLEWMDKNKTRCLIMWRRPEEWGKLIYQWVSKNGMVNSVFTLYELSSGEDTESEEFHGLEEWMLLRALQALQSEGKAEVI--SLDDGKGVKF 174          
BLAST of Ggra7274.t1 vs. uniprot
Match: A0A7J5YYM0 (Vacuolar protein-sorting-associated protein 25 n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A7J5YYM0_DISMA)

HSP 1 Score: 158 bits (399), Expect = 6.730e-46
Identity = 82/174 (47.13%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    3 EYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDISKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVW-DPDKKRCLVFWRRPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRSLQALEAIGKCVVIRGDGDDGLGVKF 175
            +YNFPPF      FT QP  +TR KQ   WC+L   YCR  +++ LD+ +A+ES +F N  I+R+LS E IQ    +L  KG+  W D +K RCLV WRRP +WG+LIYQW+   G    + T++E+  G  T G EFH LE    +RSLQAL+  GK  +I  D  DG GVKF
Sbjct:   27 QYNFPPF------FTLQPNADTRQKQLAAWCSLALSYCRHHKLYTLDVMEAQESPVFNNKKIERKLSMEAIQVVFEELRKKGNLEWLDKNKSRCLVMWRRPEEWGKLIYQWVSKNGMVNSVFTLYELANGDDTEGEEFHSLEEWMLLRSLQALQTDGKAEIITMD--DGKGVKF 192          
The following BLAST results are available for this feature:
BLAST of Ggra7274.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J3W94.770e-11383.62Vacuolar protein-sorting-associated protein 25 n=1... [more]
R7QAD22.720e-10376.00Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3E7W91.260e-6656.80Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S0ZGH45.620e-6351.76Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4YWD24.000e-5745.51Vacuolar protein-sorting-associated protein 25 n=1... [more]
M2XPN13.110e-5344.89ESCRT-II complex subunit VPS25 isoform 1 n=2 Tax=G... [more]
A0A096LTH94.660e-4747.13Vacuolar protein-sorting-associated protein 25 n=9... [more]
A0A3B3HZI61.880e-4647.13Vacuolar protein-sorting-associated protein 25 n=9... [more]
A0A8C4CRB65.520e-4645.45Vacuolar protein-sorting-associated protein 25 n=2... [more]
A0A7J5YYM06.730e-4647.13Vacuolar protein-sorting-associated protein 25 n=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008570ESCRT-II complex, Vps25 subunitPFAMPF05871ESCRT-IIcoord: 10..143
e-value: 1.3E-44
score: 151.9
IPR008570ESCRT-II complex, Vps25 subunitPANTHERPTHR13149VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25coord: 3..176
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 98..176
e-value: 2.1E-21
score: 77.4
IPR014041ESCRT-II complex, Vps25 subunit, N-terminal winged helixGENE3D1.10.10.570coord: 1..97
e-value: 1.3E-30
score: 107.7
NoneNo IPR availablePANTHERPTHR13149:SF0VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 25coord: 3..176
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 5..105
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 100..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:605711..606403 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7274.t1Ggra7274.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 605711..606403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7274.t1 ID=Ggra7274.t1|Name=Ggra7274.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=178bp
MSEYNFPPFHSFPPSFTRQPIEETRAKQTELWCNLIRDYCRVKRIFWLDI
SKARESSLFCNSAIDRRLSDEDIQYFLGQLVGKGDAVWDPDKKRCLVFWR
RPSDWGELIYQWIENTGRNGQLLTVHEIRKGSATIGYEFHDLELDTTMRS
LQALEAIGKCVVIRGDGDDGLGVKFVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008570ESCRT-II_cplx_Vps25-sub
IPR036388WH-like_DNA-bd_sf
IPR014041ESCRT-II_cplx_Vps25-sub_N
IPR036390WH_DNA-bd_sf