Ggra7273.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7273.t1
Unique NameGgra7273.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length527
Homology
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BLAST of Ggra7273.t1 vs. uniprot
Match: A0A2V3J104 (Protein sel-1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J104_9FLOR)

HSP 1 Score: 339 bits (869), Expect = 7.120e-107
Identity = 326/501 (65.07%), Postives = 380/501 (75.85%), Query Frame = 0 
Query:   26 IIMPFSTKPLEPYGHSAFEDHNPLAQEAEKLLTENLYSHS--DNAQRALKLLEIAVKQGSPRAKTLLGSMFREGFSVEXXXXXXXXXXXXXXXXXXXXXXXXXXALKLQAIKERSIHGMQDAVTQTDFAVDLNDQGEARGVLHMETKDGPLSDAPKPAELVREVRKARRKAGFTDQQALEFEEFKKQKQKEALAKERHDAISWLERAAQQGNDEAQVVLGNEILREDPSRAVELYEAAIKNRHNVDAYYNLGQIYTKGLGRIEPDEKAAFKNFAMAAQLGDPSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGFGTEEDHHEAFLLYQKXXXXXXXXXXXXXXXXXXXXXXVPPNRKVSEHFFRVADEREAETQKSDNLHLHTPVETTKAPKHPMADVPRPKKESEDS 524
            ++  FS  P +P     F D N  AQEAE+LLTE   S S    A RAL+LL++AV Q SPRAKTLLGSMFREG  VE                          AL+L  +K+     ++D VT T+FAVD++D+GE RG L ME +  P++DAPKPAELVR VRKARRKAGFTDQ++ E+EEF +++++  L ++R  A+SWLE+AA+ GNDEA V+LGNE+L +DP RA+ELYE+AI++ HN DAYYNLGQIYTKG G ++PD K A KNFAMAAQLGDPSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     HGFGT E+ HEAFLLYQ+ XXXXXXXXXXXXXXXXXXXXX   N+K+SE+FFRVA+ER+++ QK D +HL TPVE T APKHPMAD+PRP KE+E+S
Sbjct:   39 VLSNFSLTPTKPDAFE-FHDQNSSAQEAERLLTEPNASDSFEGRAGRALELLQVAVSQDSPRAKTLLGSMFREGLIVEQDRAKAERLFEEAAAEGDPVAQCSLGALQLDVLKQEKAAEIRDKVTHTEFAVDVDDKGEIRGRLQMEVEGLPMTDAPKPAELVRRVRKARRKAGFTDQESREYEEFVRREREGQLVEKRRIAMSWLEKAAEHGNDEAMVILGNEVLDDDPDRAIELYESAIRSGHNTDAYYNLGQIYTKGHGSVQPDPKIALKNFAMAAQLGDPSAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFLEAGRLGEAEALCSAAAMHFHGFGTPEEQHEAFLLYQRAXXXXXXXXXXXXXXXXXXXXXXXANKKLSEYFFRVAEERDSDNQKRDEIHLQTPVEKTDAPKHPMADIPRPDKEAEES 538
The following BLAST results are available for this feature:
BLAST of Ggra7273.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J1047.120e-10765.07Protein sel-1-like n=1 Tax=Gracilariopsis chorda T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 379..415
e-value: 1.9
score: 17.5
coord: 342..378
e-value: 14.0
score: 12.5
coord: 305..341
e-value: 0.0013
score: 28.0
coord: 452..487
e-value: 5.5
score: 16.0
coord: 416..451
e-value: 1.8E-7
score: 40.8
coord: 268..304
e-value: 8.3E-7
score: 38.6
coord: 84..119
e-value: 2.9E-5
score: 33.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 67..83
e-value: 120.0
score: 3.6
coord: 416..451
e-value: 3.3E-5
score: 24.4
coord: 305..341
e-value: 0.0064
score: 17.2
coord: 88..119
e-value: 0.0021
score: 18.7
coord: 453..480
e-value: 0.53
score: 11.1
coord: 223..235
e-value: 1.0
score: 10.2
coord: 385..414
e-value: 2.4
score: 9.0
coord: 247..264
e-value: 15.0
score: 6.4
coord: 269..304
e-value: 2.5E-6
score: 28.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 39..134
e-value: 6.8E-15
score: 57.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 364..498
e-value: 4.7E-30
score: 107.2
coord: 135..363
e-value: 2.5E-31
score: 111.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..526
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 65..283
coord: 214..472
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 218..354
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 367..484
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 47..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:603821..605401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7273.t1Ggra7273.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 603821..605401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7273.t1 ID=Ggra7273.t1|Name=Ggra7273.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=527bp
MIQQLSLLGRSRAGSGKNYVSVFRNIIMPFSTKPLEPYGHSAFEDHNPLA
QEAEKLLTENLYSHSDNAQRALKLLEIAVKQGSPRAKTLLGSMFREGFSV
EENRDEALRLFSEAAEQGDPTAQCSLGALKLQAIKERSIHGMQDAVTQTD
FAVDLNDQGEARGVLHMETKDGPLSDAPKPAELVREVRKARRKAGFTDQQ
ALEFEEFKKQKQKEALAKERHDAISWLERAAQQGNDEAQVVLGNEILRED
PSRAVELYEAAIKNRHNVDAYYNLGQIYTKGLGRIEPDEKAAFKNFAMAA
QLGDPSAQFYLGHLYKVGTKEIKVDLASSRQYIEMAAAQDHPGALYYLSL
MHRDGEGGLEISQGTFLRYVHKAASQDHGPAHACLAELYYTGSDGLDVDY
PTALQHFLAAGSLGEAEAYCSAAAMYFHGFGTEEDHHEAFLLYQKAAELG
SVQALRNIGSMYYHGHGVPPNRKVSEHFFRVADEREAETQKSDNLHLHTP
VETTKAPKHPMADVPRPKKESEDSHQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf